| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150005697
Identifier: 150005697
GI number: 150005697
Start: 4013645
End: 4014463
Strand: Reverse
Name: 150005697
Synonym: BVU_3188
Alternate gene names: NA
Gene position: 4014463-4013645 (Counterclockwise)
Preceding gene: 150005702
Following gene: 150005696
Centisome position: 77.75
GC content: 40.9
Gene sequence:
>819_bases ATGTCACCACGTCCCAAAAATATCCGTAAAGTCAATAATATGCCTCCTGTTGCAGGTTTTAAACCGATAGCCTCAAACAT TTGTCGCAAAGATGCTATATTCTTGCATTTCGAGGAGTATGAAGCGATACGGTTATGTGATTATGAAATGAAAACTCAAC AAGAGGCTTCTGTTTCAATGGGGGTATCACGTCCTACTCTTAGCCGAATATATACCAGTGCAAGGCAGAAAATTGCCCAA GCATTGGTGCGTGGTGTTGCTATAATGATAGAAGGTGGAGTAGCGTACACTGATAGTGAATGGTTCCATTGCGGAGTATG CGGTTTTGTATTCAATAATATCAAACCTGCACTTAAAATCCGTAAAATGGAATGTCCAGTGTGCCACTCCAACGACATAA GCATTAGTAATATTAACATTAATAAGAATGAGATTATGATGAAAATTGCAATTCCAACCAGAGAAAATGCAGTTGACAAC CATTTCGGTCACTGTGAGTATTACACAATCTTGACAGTAGGGCAAGACAATCAGATTCTAAGCAGCGAGACTATTCCTTC TCCACAAGGATGCGGATGTAAATCCAATATCGCAGGAGAATTAGAAAACATGGGAGTCAGCGTCATGTTGGCAGGGAATA TGGGGCAAGGTGCTTTAAATGTACTTACAACCCACCATATCAAAGTTATAAGGGGGTGTTCGGGTAATATTTTGGATATT GCCACTGACTACTTAAACGGGAAGCTTACAGATTCGGGAGTGGGCTGCTCATCCCATGAACACCACCATGAATGCCATGG ACACAATCATAAAGAATGA
Upstream 100 bases:
>100_bases ATATAAATCAAAGTTTTTATCTGTTGTGTTAAAAAGCGGCTTGTTTTTTTGTTATGAACATTTGTTCATTATATTTGCAG TCAAAAACAATAAATATTCA
Downstream 100 bases:
>100_bases TGTTTAGGAAGAACAAAATGCTACTTAACATTGTCATAGACTTTGTTATGCTGACAGCAATGGCATTGGTGAGTATAAGT GGCTTCATATTGGAAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSPRPKNIRKVNNMPPVAGFKPIASNICRKDAIFLHFEEYEAIRLCDYEMKTQQEASVSMGVSRPTLSRIYTSARQKIAQ ALVRGVAIMIEGGVAYTDSEWFHCGVCGFVFNNIKPALKIRKMECPVCHSNDISISNININKNEIMMKIAIPTRENAVDN HFGHCEYYTILTVGQDNQILSSETIPSPQGCGCKSNIAGELENMGVSVMLAGNMGQGALNVLTTHHIKVIRGCSGNILDI ATDYLNGKLTDSGVGCSSHEHHHECHGHNHKE
Sequences:
>Translated_272_residues MSPRPKNIRKVNNMPPVAGFKPIASNICRKDAIFLHFEEYEAIRLCDYEMKTQQEASVSMGVSRPTLSRIYTSARQKIAQ ALVRGVAIMIEGGVAYTDSEWFHCGVCGFVFNNIKPALKIRKMECPVCHSNDISISNININKNEIMMKIAIPTRENAVDN HFGHCEYYTILTVGQDNQILSSETIPSPQGCGCKSNIAGELENMGVSVMLAGNMGQGALNVLTTHHIKVIRGCSGNILDI ATDYLNGKLTDSGVGCSSHEHHHECHGHNHKE >Mature_271_residues SPRPKNIRKVNNMPPVAGFKPIASNICRKDAIFLHFEEYEAIRLCDYEMKTQQEASVSMGVSRPTLSRIYTSARQKIAQA LVRGVAIMIEGGVAYTDSEWFHCGVCGFVFNNIKPALKIRKMECPVCHSNDISISNININKNEIMMKIAIPTRENAVDNH FGHCEYYTILTVGQDNQILSSETIPSPQGCGCKSNIAGELENMGVSVMLAGNMGQGALNVLTTHHIKVIRGCSGNILDIA TDYLNGKLTDSGVGCSSHEHHHECHGHNHKE
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002852 [H]
Pfam domain/function: PF02001 DUF134 [H]
EC number: NA
Molecular weight: Translated: 29969; Mature: 29838
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRPKNIRKVNNMPPVAGFKPIASNICRKDAIFLHFEEYEAIRLCDYEMKTQQEASVSM CCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCEEEEECCHHHCCHHHHHHC GVSRPTLSRIYTSARQKIAQALVRGVAIMIEGGVAYTDSEWFHCGVCGFVFNNIKPALKI CCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEECCCCEEEHHHHHHHHCCCCCEEE RKMECPVCHSNDISISNININKNEIMMKIAIPTRENAVDNHFGHCEYYTILTVGQDNQIL EECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEE SSETIPSPQGCGCKSNIAGELENMGVSVMLAGNMGQGALNVLTTHHIKVIRGCSGNILDI CCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCHHH ATDYLNGKLTDSGVGCSSHEHHHECHGHNHKE HHHHCCCEECCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure SPRPKNIRKVNNMPPVAGFKPIASNICRKDAIFLHFEEYEAIRLCDYEMKTQQEASVSM CCCCCCHHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCEEEEECCHHHCCHHHHHHC GVSRPTLSRIYTSARQKIAQALVRGVAIMIEGGVAYTDSEWFHCGVCGFVFNNIKPALKI CCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEECCCCEEEHHHHHHHHCCCCCEEE RKMECPVCHSNDISISNININKNEIMMKIAIPTRENAVDNHFGHCEYYTILTVGQDNQIL EECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEE SSETIPSPQGCGCKSNIAGELENMGVSVMLAGNMGQGALNVLTTHHIKVIRGCSGNILDI CCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCHHH ATDYLNGKLTDSGVGCSSHEHHHECHGHNHKE HHHHCCCEECCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]