| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is tgt [H]
Identifier: 150005672
GI number: 150005672
Start: 3980059
End: 3981189
Strand: Reverse
Name: tgt [H]
Synonym: BVU_3162
Alternate gene names: 150005672
Gene position: 3981189-3980059 (Counterclockwise)
Preceding gene: 150005673
Following gene: 150005671
Centisome position: 77.11
GC content: 45.8
Gene sequence:
>1131_bases ATGACTTTTGACTTACAATATACAGACCCCAAATCGAATGCCCGTGCCGGATTGATAACAACTGACCACGGGCAAATAGA AACCCCCATCTTTATGCCTGTAGGCACATTGGGAACGGTGAAGGGCGTGCATTTACATGAGTTGAAAGAGGACATTAAAG CACAGATAATCCTGGGCAACACTTACCACCTGTATTTACGACCGGGACTGGATATAATAGAACGTGCCGGAGGTCTGCAT AAATTCAACGGCTTTGACCGTCCTATGCTGACTGACAGTGGTGGTTTTCAGGTATTCTCCTTATCAGGTATCCGCAAAAT GAGAGAAGAAGGTGTGGAATTTCGCTCACATATAGACGGTTCGAAACACCTGTTCACTCCTGAACGGGTGATGGACATAG AACGGACTATCGGTGCAGATATCATGATGGCTTTTGACGAATGTACTCCGGGAACCGCAGATTATGAATACGCAAAAAAA TCAATGCAGCTTACCCATCGTTGGCTGGACCGTTGCATAAAGCATTTCAACGAAACCGATCCCAAATATGGTTATCAACA GTCATTATTTCCCATAGTACAAGGCTGTGTCTATCCCGACTTACGCAAACAATCAGCGGAATATATTGCCTCCAAGGGAG CTGACGGAAATGCCATCGGTGGCCTGGCCGTAGGTGAGCCAACCGAGAAAATGTACGAAATGATAGAGGTTGTCAATGAA ATCTTACCCAAAGACAAGCCCCGCTATCTGATGGGAGTCGGTACACCGGTAAATATACTGGAGGGTATAGAACGCGGTGT AGATATGTTTGATTGTGTAATGCCGACCCGGAACGGACGCAATGGAATGTTATTCACTAAAAACGGCATAATGAACATGC GCAACAAGAAATGGGAGGATGATTATTCTCCTATCGAGGCCGAAGGAGCATCGTATGTAGATACCATGTACAGCCGTGCT TACTTGCGCCATCTGTTCCACGCACAAGAACTGCTGGCCATGCAAATCGCTTCTATCCACAACTTGGCATTCTATCTGTG GCTAGCAGGCGAGGCCCGTAAACACATCATTGCAGGAGATTTCTCTACGTGGAAACCAATGATGGTAAAACGCTTATCTA CAAGATTATAA
Upstream 100 bases:
>100_bases ATATTAAGGAAGTATTGGCTTTGGCTCTCACCAATGAAAAAGTAAACGATGCCATTGATTTTAATATTACCAATCAAAAA ACAGAAGAAAAGAAATAAAT
Downstream 100 bases:
>100_bases ATTACTAGAAATGAAGAATTGGTTCAAGACAAACACAGATTCATCCCCAAAGGATAAAAAATGGTGGAAGCCGAATATCA GTTGGCTGAAACTGGATAAA
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTFDLQYTDPKSNARAGLITTDHGQIETPIFMPVGTLGTVKGVHLHELKEDIKAQIILGNTYHLYLRPGLDIIERAGGLH KFNGFDRPMLTDSGGFQVFSLSGIRKMREEGVEFRSHIDGSKHLFTPERVMDIERTIGADIMMAFDECTPGTADYEYAKK SMQLTHRWLDRCIKHFNETDPKYGYQQSLFPIVQGCVYPDLRKQSAEYIASKGADGNAIGGLAVGEPTEKMYEMIEVVNE ILPKDKPRYLMGVGTPVNILEGIERGVDMFDCVMPTRNGRNGMLFTKNGIMNMRNKKWEDDYSPIEAEGASYVDTMYSRA YLRHLFHAQELLAMQIASIHNLAFYLWLAGEARKHIIAGDFSTWKPMMVKRLSTRL
Sequences:
>Translated_376_residues MTFDLQYTDPKSNARAGLITTDHGQIETPIFMPVGTLGTVKGVHLHELKEDIKAQIILGNTYHLYLRPGLDIIERAGGLH KFNGFDRPMLTDSGGFQVFSLSGIRKMREEGVEFRSHIDGSKHLFTPERVMDIERTIGADIMMAFDECTPGTADYEYAKK SMQLTHRWLDRCIKHFNETDPKYGYQQSLFPIVQGCVYPDLRKQSAEYIASKGADGNAIGGLAVGEPTEKMYEMIEVVNE ILPKDKPRYLMGVGTPVNILEGIERGVDMFDCVMPTRNGRNGMLFTKNGIMNMRNKKWEDDYSPIEAEGASYVDTMYSRA YLRHLFHAQELLAMQIASIHNLAFYLWLAGEARKHIIAGDFSTWKPMMVKRLSTRL >Mature_375_residues TFDLQYTDPKSNARAGLITTDHGQIETPIFMPVGTLGTVKGVHLHELKEDIKAQIILGNTYHLYLRPGLDIIERAGGLHK FNGFDRPMLTDSGGFQVFSLSGIRKMREEGVEFRSHIDGSKHLFTPERVMDIERTIGADIMMAFDECTPGTADYEYAKKS MQLTHRWLDRCIKHFNETDPKYGYQQSLFPIVQGCVYPDLRKQSAEYIASKGADGNAIGGLAVGEPTEKMYEMIEVVNEI LPKDKPRYLMGVGTPVNILEGIERGVDMFDCVMPTRNGRNGMLFTKNGIMNMRNKKWEDDYSPIEAEGASYVDTMYSRAY LRHLFHAQELLAMQIASIHNLAFYLWLAGEARKHIIAGDFSTWKPMMVKRLSTRL
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=351, Percent_Identity=40.4558404558405, Blast_Score=281, Evalue=9e-76, Organism=Escherichia coli, GI1786607, Length=364, Percent_Identity=49.4505494505495, Blast_Score=353, Evalue=1e-98, Organism=Caenorhabditis elegans, GI17544680, Length=344, Percent_Identity=38.3720930232558, Blast_Score=239, Evalue=1e-63, Organism=Caenorhabditis elegans, GI25146502, Length=126, Percent_Identity=30.1587301587302, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI19920510, Length=353, Percent_Identity=42.4929178470255, Blast_Score=291, Evalue=4e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42664; Mature: 42533
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDLQYTDPKSNARAGLITTDHGQIETPIFMPVGTLGTVKGVHLHELKEDIKAQIILGN CEEEEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCEEEEECC TYHLYLRPGLDIIERAGGLHKFNGFDRPMLTDSGGFQVFSLSGIRKMREEGVEFRSHIDG EEEEEECCCHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHCCC SKHLFTPERVMDIERTIGADIMMAFDECTPGTADYEYAKKSMQLTHRWLDRCIKHFNETD CCCCCCHHHHHHHHHHHCHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PKYGYQQSLFPIVQGCVYPDLRKQSAEYIASKGADGNAIGGLAVGEPTEKMYEMIEVVNE CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ILPKDKPRYLMGVGTPVNILEGIERGVDMFDCVMPTRNGRNGMLFTKNGIMNMRNKKWED HCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC DYSPIEAEGASYVDTMYSRAYLRHLFHAQELLAMQIASIHNLAFYLWLAGEARKHIIAGD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECC FSTWKPMMVKRLSTRL CCCHHHHHHHHHHHCC >Mature Secondary Structure TFDLQYTDPKSNARAGLITTDHGQIETPIFMPVGTLGTVKGVHLHELKEDIKAQIILGN EEEEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCEEEEECC TYHLYLRPGLDIIERAGGLHKFNGFDRPMLTDSGGFQVFSLSGIRKMREEGVEFRSHIDG EEEEEECCCHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHCCC SKHLFTPERVMDIERTIGADIMMAFDECTPGTADYEYAKKSMQLTHRWLDRCIKHFNETD CCCCCCHHHHHHHHHHHCHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PKYGYQQSLFPIVQGCVYPDLRKQSAEYIASKGADGNAIGGLAVGEPTEKMYEMIEVVNE CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ILPKDKPRYLMGVGTPVNILEGIERGVDMFDCVMPTRNGRNGMLFTKNGIMNMRNKKWED HCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC DYSPIEAEGASYVDTMYSRAYLRHLFHAQELLAMQIASIHNLAFYLWLAGEARKHIIAGD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECC FSTWKPMMVKRLSTRL CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]