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The map label for this gene is yidE [C]

Identifier: 150005613

GI number: 150005613

Start: 3920741

End: 3922429

Strand: Reverse

Name: yidE [C]

Synonym: BVU_3101

Alternate gene names: 150005613

Gene position: 3922429-3920741 (Counterclockwise)

Preceding gene: 150005614

Following gene: 150005612

Centisome position: 75.97

GC content: 41.92

Gene sequence:

>1689_bases
ATGGAACTTCTTAAAAACCTCTTTGAAGGATATCCCAATCTTTGGGGCGGAGGTGTAGCACACTCCGTACTCATTCTGTC
ACTAGTTATCGCCTTTGGAATTATGCTGGGTAAAATAAAAATATCCGGCATCTCACTTGGTGTCACATGGATTCTTTTTG
TCGGTATCGTATTCGGCCATTTCAATCTGAATCTGAATGAACACCTGCTACATTTTCTAAAAGAATTCGGTCTTATTTTG
TTCGTCTATTCCATTGGTTTGCAGGTGGGTCCCGGTTTCTTCTCAGCCTTTAAGAAAGGAGGATTTACGCTGAACATGTT
GGCTATGGGGGCTATTTTTATCAGTGTAGTCATTACTATCATTTTACATTTTACTACCGGAACTCCCATAACCACCATGG
TCGGCATTCTCTCTGGTGCTGTTACCAATACTCCCGGCCTTGGTGCCGCCCAACAGGCAAATAGTGATTTAAATGGCATA
GATGCACCGGAGATTGCGATGGGATATGCTGTTGCCTATCCCTTGGGGGTGGTTGGTGCCATTCTCTCATTGCTTGCACT
GAAATACATTCTTAATATCAAAACATCACAAGAAGAAGCCGATGCCGAAAAAGGATTGGGACATTTACAGGAACTGACCG
TACGCCCCGTTACATTAGAGATAAAAAATGAAGCAATACATGGGAAGACCATTAAGGAAATACGTCCTTTGGTAAACCGC
AACTTCGTCATTTCGCGCATACGCCATCATGACGGACAGCAGGAAGTGGAACTAGTAAATTCAGAAACGATATTACATAT
TGATGACAAGATTCTGGTTATCTCGAACCCTATTGACATTGAAGCGATTACAGTATTTTTTGGCAAACAGGTAGAAATGG
AATGGGAACAGTTAAACAAGAAACTTATCTCACGCCGCATTTTGATAACAAAGCCTGAGTTAAATGGAAAAATGCTCTCA
CAACTTAAGATACGAAATAACTTCGGTGCGAGCATCACCCGTATCAACCGTTCAGGAGTAGACTTGGTAGCCTCCCCACA
TTTACAGTTGCAAATGGGCGACCGTGTAACTATAGTTGGTAGTGAACTTGCTGTCACTCATGCCGAAAAGGTTTTGGGAA
ACTCCATGAAGAGACTGAATCATCCCAATCTTATCCCCATTTTTTTCGGCATCGCATTAGGATGTATCTTGGGAAGTATT
CCATTTATGTTTCCAGGTATTCCACAACCAGTAAAACTTGGTCTAGCAGGTGGACCGCTTATTGTATCCATTCTTATCAG
TCGTTTCGGTCCTCAATATAAAATGATTACATACACCACGATGAGTGCTAACTTGATGATAAGAGAAATCGGGATTTCCT
TATTCCTAGCTTGTGTAGGGTTGGGAGCCGGGAAAGATTTTATAGAGACAATTGTAAATGAAGGTGGATATATTTGGATT
ATGTATGGAGCTATTATTACGACCGTACCATTAATCATAACGGGGCTCATTGGGCGTTATGCCTGTAAATTAAACTATTA
TACCCTTATTGGTGTATTATCAGGAGCAAATACTAATCCGCCTGCCCTCGCCTATTCCAATGATCTGACTTCATGTGACG
CTCCGGCCGTGGGATATGCCACCGTATATCCGCTTGCTATGTTCCTACGCGTACTTACGGCTCAATTATTGATACTCTCA
TTAGGTTAA

Upstream 100 bases:

>100_bases
AGAAGTGATTTTTCCGGGGATACTTTTACCAACCCACATGATGGGAAATTTTAAATATAAAATGATGACTTAGTTAAAAA
TAAATATATTTCTTAATACT

Downstream 100 bases:

>100_bases
ACTTTAAAATTCTTTAAATATGTACCAACAAGAAACGATTACCAAAGAACTACATTTACAGTTAAGTGATGAAGATTTGG
CACAGTTCGAACTTGATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MELLKNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKISGISLGVTWILFVGIVFGHFNLNLNEHLLHFLKEFGLIL
FVYSIGLQVGPGFFSAFKKGGFTLNMLAMGAIFISVVITIILHFTTGTPITTMVGILSGAVTNTPGLGAAQQANSDLNGI
DAPEIAMGYAVAYPLGVVGAILSLLALKYILNIKTSQEEADAEKGLGHLQELTVRPVTLEIKNEAIHGKTIKEIRPLVNR
NFVISRIRHHDGQQEVELVNSETILHIDDKILVISNPIDIEAITVFFGKQVEMEWEQLNKKLISRRILITKPELNGKMLS
QLKIRNNFGASITRINRSGVDLVASPHLQLQMGDRVTIVGSELAVTHAEKVLGNSMKRLNHPNLIPIFFGIALGCILGSI
PFMFPGIPQPVKLGLAGGPLIVSILISRFGPQYKMITYTTMSANLMIREIGISLFLACVGLGAGKDFIETIVNEGGYIWI
MYGAIITTVPLIITGLIGRYACKLNYYTLIGVLSGANTNPPALAYSNDLTSCDAPAVGYATVYPLAMFLRVLTAQLLILS
LG

Sequences:

>Translated_562_residues
MELLKNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKISGISLGVTWILFVGIVFGHFNLNLNEHLLHFLKEFGLIL
FVYSIGLQVGPGFFSAFKKGGFTLNMLAMGAIFISVVITIILHFTTGTPITTMVGILSGAVTNTPGLGAAQQANSDLNGI
DAPEIAMGYAVAYPLGVVGAILSLLALKYILNIKTSQEEADAEKGLGHLQELTVRPVTLEIKNEAIHGKTIKEIRPLVNR
NFVISRIRHHDGQQEVELVNSETILHIDDKILVISNPIDIEAITVFFGKQVEMEWEQLNKKLISRRILITKPELNGKMLS
QLKIRNNFGASITRINRSGVDLVASPHLQLQMGDRVTIVGSELAVTHAEKVLGNSMKRLNHPNLIPIFFGIALGCILGSI
PFMFPGIPQPVKLGLAGGPLIVSILISRFGPQYKMITYTTMSANLMIREIGISLFLACVGLGAGKDFIETIVNEGGYIWI
MYGAIITTVPLIITGLIGRYACKLNYYTLIGVLSGANTNPPALAYSNDLTSCDAPAVGYATVYPLAMFLRVLTAQLLILS
LG
>Mature_562_residues
MELLKNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKISGISLGVTWILFVGIVFGHFNLNLNEHLLHFLKEFGLIL
FVYSIGLQVGPGFFSAFKKGGFTLNMLAMGAIFISVVITIILHFTTGTPITTMVGILSGAVTNTPGLGAAQQANSDLNGI
DAPEIAMGYAVAYPLGVVGAILSLLALKYILNIKTSQEEADAEKGLGHLQELTVRPVTLEIKNEAIHGKTIKEIRPLVNR
NFVISRIRHHDGQQEVELVNSETILHIDDKILVISNPIDIEAITVFFGKQVEMEWEQLNKKLISRRILITKPELNGKMLS
QLKIRNNFGASITRINRSGVDLVASPHLQLQMGDRVTIVGSELAVTHAEKVLGNSMKRLNHPNLIPIFFGIALGCILGSI
PFMFPGIPQPVKLGLAGGPLIVSILISRFGPQYKMITYTTMSANLMIREIGISLFLACVGLGAGKDFIETIVNEGGYIWI
MYGAIITTVPLIITGLIGRYACKLNYYTLIGVLSGANTNPPALAYSNDLTSCDAPAVGYATVYPLAMFLRVLTAQLLILS
LG

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=548, Percent_Identity=39.5985401459854, Blast_Score=391, Evalue=1e-110,
Organism=Escherichia coli, GI1787071, Length=556, Percent_Identity=26.2589928057554, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 60886; Mature: 60886

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLKNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKISGISLGVTWILFVGIVFGH
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHH
FNLNLNEHLLHFLKEFGLILFVYSIGLQVGPGFFSAFKKGGFTLNMLAMGAIFISVVITI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
ILHFTTGTPITTMVGILSGAVTNTPGLGAAQQANSDLNGIDAPEIAMGYAVAYPLGVVGA
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ILSLLALKYILNIKTSQEEADAEKGLGHLQELTVRPVTLEIKNEAIHGKTIKEIRPLVNR
HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCC
NFVISRIRHHDGQQEVELVNSETILHIDDKILVISNPIDIEAITVFFGKQVEMEWEQLNK
HHHHHHHHHCCCCHHHHEECCCEEEEECCEEEEEECCCCEEEEEEEECCCCCHHHHHHHH
KLISRRILITKPELNGKMLSQLKIRNNFGASITRINRSGVDLVASPHLQLQMGDRVTIVG
HHHHCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCEEEEECCEEEEEE
SELAVTHAEKVLGNSMKRLNHPNLIPIFFGIALGCILGSIPFMFPGIPQPVKLGLAGGPL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCCCHH
IVSILISRFGPQYKMITYTTMSANLMIREIGISLFLACVGLGAGKDFIETIVNEGGYIWI
HHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEE
MYGAIITTVPLIITGLIGRYACKLNYYTLIGVLSGANTNPPALAYSNDLTSCDAPAVGYA
EHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHH
TVYPLAMFLRVLTAQLLILSLG
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELLKNLFEGYPNLWGGGVAHSVLILSLVIAFGIMLGKIKISGISLGVTWILFVGIVFGH
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHH
FNLNLNEHLLHFLKEFGLILFVYSIGLQVGPGFFSAFKKGGFTLNMLAMGAIFISVVITI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
ILHFTTGTPITTMVGILSGAVTNTPGLGAAQQANSDLNGIDAPEIAMGYAVAYPLGVVGA
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ILSLLALKYILNIKTSQEEADAEKGLGHLQELTVRPVTLEIKNEAIHGKTIKEIRPLVNR
HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCC
NFVISRIRHHDGQQEVELVNSETILHIDDKILVISNPIDIEAITVFFGKQVEMEWEQLNK
HHHHHHHHHCCCCHHHHEECCCEEEEECCEEEEEECCCCEEEEEEEECCCCCHHHHHHHH
KLISRRILITKPELNGKMLSQLKIRNNFGASITRINRSGVDLVASPHLQLQMGDRVTIVG
HHHHCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCEEEEECCEEEEEE
SELAVTHAEKVLGNSMKRLNHPNLIPIFFGIALGCILGSIPFMFPGIPQPVKLGLAGGPL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCCCHH
IVSILISRFGPQYKMITYTTMSANLMIREIGISLFLACVGLGAGKDFIETIVNEGGYIWI
HHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEE
MYGAIITTVPLIITGLIGRYACKLNYYTLIGVLSGANTNPPALAYSNDLTSCDAPAVGYA
EHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHH
TVYPLAMFLRVLTAQLLILSLG
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA