| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is cbiHC [H]
Identifier: 150005595
GI number: 150005595
Start: 3897781
End: 3899187
Strand: Reverse
Name: cbiHC [H]
Synonym: BVU_3083
Alternate gene names: 150005595
Gene position: 3899187-3897781 (Counterclockwise)
Preceding gene: 150005596
Following gene: 150005594
Centisome position: 75.52
GC content: 47.69
Gene sequence:
>1407_bases ATGAAAAAGGCCCAATTAATCGTAGCCGGCATTGGTCCCGGCTCACCCGAAGATATAACCCCCGCTGTAATACAAGCAGT CAAGAACAGCGATGTAGTAATCGGCTATAAATACTATTTCCAGTTTATCGAACCCTATCTGGAACCGGGCACCGAATGTA TAGACACCGGAATGAAACGTGAAAAAGCACGTGCCGAACAGGCTTTCGAGCTGGCGGAACAGGGAAAGACTGTATGCGTT ATCAGCTCGGGAGATGCCGGAATTTATGGCATGGCTCCGCTGGTTTACGAAATGAAACGCGAGCGTGGCAGCCGGGTGGA AATAGAAGTATTGCCGGGTATCAGTGCTTTTCAGAAAGCGGCTTCCCTGTTGGGAGCCCCCATCGGTCACGATTTCTGTG TGATTTCCCTCTCCGACCTCATGACACCATGGGACCGGATTGAAAAACGCATCCATGCAGCCGCAACGGCAGATTTTGTA ACGGCGGTCTATAATCCCAAAAGCGAAGGGCGGTATTGGCAACTCTACAGATTAAAAGAAATTTTTCTGAAAGAGCGTGA CCCCGAAACTCCGGTAGGCTTTGTGCGTCAGGCCGGACGTAAGGAAGAAACCGTGACAATCACCACTTTGCAAGAGTTCG ATCCCGAACAGGTGGATATGTTTACAGTGGTATTGATTGGCAACTCCCAATCTTATCATCAGGAAGGGAAATTAATCACT CCACGTGGTTATTACCGGGAAAAGACCACCGATGCGACAGGAATCGGTCAGGAGATTATGATAAACAGTTTCCGTACTAT TGAGAAAGAATTGAAAAATAAAAATATTCCTTCGGATCACAAATGGGCATTACTGCATGCCATCCATACCACAGCCGATT TCGAGATGGAAAACATATTGCATATAGATCCTCTTGCCGTAGAATGTCTGTATAAAATATTGAATGAAGGAAAAGTACGT ACAATTATTACGGATGTGACGATGGCTGCCGCGGGCATCCGTAAAGGTGCTTTGGAACGGATGGGCATCGGGGTGAAATG CTATCTGGGTGACGAACGCGCGGCAGCATTGGCAAAAGAAAAAGGAATCACCCGTACACAGGCCGGTATACGTATGGCAG CAGAGGAACATCCGGAAGCTTTATATGTATTCGGTAATGCCCCTACAGCATTGATGGAACTGTGTGACCTGATACGGAAA GAAAAAGCGCATCCATGCGGCATCATCGCTGCTCCGGTGGGCTTTGTGCACGTTTGCGAAAGCAAACACATGGTGAAACC TTTCAGCCACATCCCCAAACTGATAGTAGAAGGACGCAAAGGGGGAAGCAATCTGGCAGCGACTCTGGTAAATGCCATCC TTACTTTTGATGATGCGGAACAACTGAAACCGGGAAGAGATGTATAA
Upstream 100 bases:
>100_bases GTCAGGACAGCGCATTGTCATTCAGAGGATTATATTGGCTGAAAGCACTGAAGGAAACTTTTAAATCAGATTCCGGAAAG GAATAATTATATAATAAAAA
Downstream 100 bases:
>100_bases GTCCATGCAAACATTCTATATAATAGGTATAAGCGATAACCGGAATCAATTTCTTTCTCCTGAAATCCGGAACTTGGTTT CTCAAGGGAAAGTCTTCTCG
Product: precorrin-3B C17-methyltransferase
Products: NA
Alternate protein names: Cobalt-precorrin-3B C(17)-methyltransferase; Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase; Cobalt-precorrin-8X methylmutase; Cobalt-precorrin isomerase [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKKAQLIVAGIGPGSPEDITPAVIQAVKNSDVVIGYKYYFQFIEPYLEPGTECIDTGMKREKARAEQAFELAEQGKTVCV ISSGDAGIYGMAPLVYEMKRERGSRVEIEVLPGISAFQKAASLLGAPIGHDFCVISLSDLMTPWDRIEKRIHAAATADFV TAVYNPKSEGRYWQLYRLKEIFLKERDPETPVGFVRQAGRKEETVTITTLQEFDPEQVDMFTVVLIGNSQSYHQEGKLIT PRGYYREKTTDATGIGQEIMINSFRTIEKELKNKNIPSDHKWALLHAIHTTADFEMENILHIDPLAVECLYKILNEGKVR TIITDVTMAAAGIRKGALERMGIGVKCYLGDERAAALAKEKGITRTQAGIRMAAEEHPEALYVFGNAPTALMELCDLIRK EKAHPCGIIAAPVGFVHVCESKHMVKPFSHIPKLIVEGRKGGSNLAATLVNAILTFDDAEQLKPGRDV
Sequences:
>Translated_468_residues MKKAQLIVAGIGPGSPEDITPAVIQAVKNSDVVIGYKYYFQFIEPYLEPGTECIDTGMKREKARAEQAFELAEQGKTVCV ISSGDAGIYGMAPLVYEMKRERGSRVEIEVLPGISAFQKAASLLGAPIGHDFCVISLSDLMTPWDRIEKRIHAAATADFV TAVYNPKSEGRYWQLYRLKEIFLKERDPETPVGFVRQAGRKEETVTITTLQEFDPEQVDMFTVVLIGNSQSYHQEGKLIT PRGYYREKTTDATGIGQEIMINSFRTIEKELKNKNIPSDHKWALLHAIHTTADFEMENILHIDPLAVECLYKILNEGKVR TIITDVTMAAAGIRKGALERMGIGVKCYLGDERAAALAKEKGITRTQAGIRMAAEEHPEALYVFGNAPTALMELCDLIRK EKAHPCGIIAAPVGFVHVCESKHMVKPFSHIPKLIVEGRKGGSNLAATLVNAILTFDDAEQLKPGRDV >Mature_468_residues MKKAQLIVAGIGPGSPEDITPAVIQAVKNSDVVIGYKYYFQFIEPYLEPGTECIDTGMKREKARAEQAFELAEQGKTVCV ISSGDAGIYGMAPLVYEMKRERGSRVEIEVLPGISAFQKAASLLGAPIGHDFCVISLSDLMTPWDRIEKRIHAAATADFV TAVYNPKSEGRYWQLYRLKEIFLKERDPETPVGFVRQAGRKEETVTITTLQEFDPEQVDMFTVVLIGNSQSYHQEGKLIT PRGYYREKTTDATGIGQEIMINSFRTIEKELKNKNIPSDHKWALLHAIHTTADFEMENILHIDPLAVECLYKILNEGKVR TIITDVTMAAAGIRKGALERMGIGVKCYLGDERAAALAKEKGITRTQAGIRMAAEEHPEALYVFGNAPTALMELCDLIRK EKAHPCGIIAAPVGFVHVCESKHMVKPFSHIPKLIVEGRKGGSNLAATLVNAILTFDDAEQLKPGRDV
Specific function: Bifunctional enzyme with a methyltransferase domain that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 and an isomerase domain that catalyzes the conversion of cobalt-precorrin-8X to cobyrinic acid; a methyl migration
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the CobH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014422 - InterPro: IPR003722 - InterPro: IPR006363 [H]
Pfam domain/function: PF02570 CbiC; PF00590 TP_methylase [H]
EC number: NA
Molecular weight: Translated: 51794; Mature: 51794
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAQLIVAGIGPGSPEDITPAVIQAVKNSDVVIGYKYYFQFIEPYLEPGTECIDTGMKR CCCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHH EKARAEQAFELAEQGKTVCVISSGDAGIYGMAPLVYEMKRERGSRVEIEVLPGISAFQKA HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH ASLLGAPIGHDFCVISLSDLMTPWDRIEKRIHAAATADFVTAVYNPKSEGRYWQLYRLKE HHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHH IFLKERDPETPVGFVRQAGRKEETVTITTLQEFDPEQVDMFTVVLIGNSQSYHQEGKLIT HHHHCCCCCCCHHHHHHCCCCCCEEEEEEHHHCCCCCCCEEEEEEEECCCCHHCCCCEEC PRGYYREKTTDATGIGQEIMINSFRTIEKELKNKNIPSDHKWALLHAIHTTADFEMENIL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCEE HIDPLAVECLYKILNEGKVRTIITDVTMAAAGIRKGALERMGIGVKCYLGDERAAALAKE EECHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH KGITRTQAGIRMAAEEHPEALYVFGNAPTALMELCDLIRKEKAHPCGIIAAPVGFVHVCE CCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHC SKHMVKPFSHIPKLIVEGRKGGSNLAATLVNAILTFDDAEQLKPGRDV CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure MKKAQLIVAGIGPGSPEDITPAVIQAVKNSDVVIGYKYYFQFIEPYLEPGTECIDTGMKR CCCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHH EKARAEQAFELAEQGKTVCVISSGDAGIYGMAPLVYEMKRERGSRVEIEVLPGISAFQKA HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH ASLLGAPIGHDFCVISLSDLMTPWDRIEKRIHAAATADFVTAVYNPKSEGRYWQLYRLKE HHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHH IFLKERDPETPVGFVRQAGRKEETVTITTLQEFDPEQVDMFTVVLIGNSQSYHQEGKLIT HHHHCCCCCCCHHHHHHCCCCCCEEEEEEHHHCCCCCCCEEEEEEEECCCCHHCCCCEEC PRGYYREKTTDATGIGQEIMINSFRTIEKELKNKNIPSDHKWALLHAIHTTADFEMENIL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCEE HIDPLAVECLYKILNEGKVRTIITDVTMAAAGIRKGALERMGIGVKCYLGDERAAALAKE EECHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH KGITRTQAGIRMAAEEHPEALYVFGNAPTALMELCDLIRKEKAHPCGIIAAPVGFVHVCE CCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHC SKHMVKPFSHIPKLIVEGRKGGSNLAATLVNAILTFDDAEQLKPGRDV CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]