| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is uxaB [H]
Identifier: 150005587
GI number: 150005587
Start: 3886947
End: 3888386
Strand: Direct
Name: uxaB [H]
Synonym: BVU_3075
Alternate gene names: 150005587
Gene position: 3886947-3888386 (Clockwise)
Preceding gene: 150005585
Following gene: 150005589
Centisome position: 75.28
GC content: 44.03
Gene sequence:
>1440_bases ATGAAAGCATTAAACAAGGAGACAGCAGCAAAGACTCAACGTCCCGAAAGAATCATTCAATTTGGTGAGGGTAACTTCCT GCGTGCGTTTGTGGATTGGATTATCTACAACATGAACGAAAAAACTGATTTCAACAGCAGTGTGGTGGTGGTTCAACCTA TTGAAAAAGGTATGGTTGACATGTTGAACGCACAAGATTGTCTGTATCATGTAAACTTGCAGGGTTTGGATAAAGGACAG GTGGTAAACAGCCTGACAAAAATTGATGTGATCAGTCGTGCCTTGAATCCTTATTCTCAGAATGATGAATTTATGAAATT GGCGGAACAGCCGGAAATGCGTTTCGTTATCTCTAATACGACAGAGGCCGGTATCGCTTTTGATCCTGCCTGCAAGCTGG ATGATGCCCCTGCTTCATCTTATCCGGGCAAACTGACCCAGTTGCTGTATCACCGTTATAAAACGTTCAATGGTGACAAG AGCAAAGGTTTGATAATTTTCCCTTGCGAATTGATTTTCCTGAACGGCCATAAACTGAAAGAAACCATCTATCAATATAT TGATTTGTGGAACTTGGGTGAAGACTTCAAGCAATGGTTTGAGGAAGCTTGTGGTGTCTATGCTACTTTGGTAGACCGTA TTGTGCCGGGATTCCCCCGCAAAGATATCGCTGCTATTAAAGAAAAATTGCAGTATGATGACAATCTGGTGGTACAGGCA GAAATCTTCCATTTGTGGGTAATTGAAGCTCCGCAGGAGGTCGCCAAGGAATTCCCTGCCGACAAAGCCGGTTTGAATGT ATTGTTCGTTCCGTCTGAAGCTCCTTATCACGAAAGAAAAGTTACTTTGCTGAACGGTCCTCACACAGTGCTGTCTCCGG TAGCTTATCTGTCTGGAATCAACATTGTGCGCGAGGCTTGCGAGCATGAAGTGGTAGGTAAATACATTCATAAAGTTATG TTCGATGAGTTGATGGAAACCCTGAACCTGCCGAAAGAAGAATTGAAGAAGTTTGCGGAAGATGTTTTGGAGCGTTTCAA CAATCCGTTTGTTGATCACCAGGTGACTTCTATCATGCTGAATTCATTCCCTAAATATGAAACTCGCGACCTCCCGGGCT TGAAAGTTTATCTGGAGCGTAAGGGTGAGTTGCCTAAAGGCTTGGTATTGGGACTGGCGGCTATCATCACTTATTATAAA GGTGGTGTTCGTGCTGACGGTGCTGAGATTGTTCCGAACGATGCTCCTGAAATCATGAATCTGCTGAAAGAACTTTGGGC TACAGGCTGCACTCAGAAAGTGGCGGAAGGCGTGTTGGCAGCAGAATCTATTTGGGGTGAGAACTTGAACAACATTCCGG GTTTGACCGCCGCAGTAAAAGCTGATCTTGACTCTATTCAAGAAAAGGGTATGCTGGAAACAGTAAAGGGTATTCTCTAA
Upstream 100 bases:
>100_bases TACCATTTAAAAGAAAGCATGAATACTATGAGTACACAATAAAATCTGATTCGTCTTCAATAAGTACAGGTATGGATAAA CACATAATATAATTAAAAAT
Downstream 100 bases:
>100_bases TCAGATTAATTGTTAGAAATAGTTTATAAATTCCTTGAGGGAGATTTGGTTATAAAACTGAATCTCCCTATTTTTGTATC TATACAAGATAGATGTGGCA
Product: altronate oxidoreductase
Products: NA
Alternate protein names: Tagaturonate dehydrogenase; Tagaturonate reductase [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MKALNKETAAKTQRPERIIQFGEGNFLRAFVDWIIYNMNEKTDFNSSVVVVQPIEKGMVDMLNAQDCLYHVNLQGLDKGQ VVNSLTKIDVISRALNPYSQNDEFMKLAEQPEMRFVISNTTEAGIAFDPACKLDDAPASSYPGKLTQLLYHRYKTFNGDK SKGLIIFPCELIFLNGHKLKETIYQYIDLWNLGEDFKQWFEEACGVYATLVDRIVPGFPRKDIAAIKEKLQYDDNLVVQA EIFHLWVIEAPQEVAKEFPADKAGLNVLFVPSEAPYHERKVTLLNGPHTVLSPVAYLSGINIVREACEHEVVGKYIHKVM FDELMETLNLPKEELKKFAEDVLERFNNPFVDHQVTSIMLNSFPKYETRDLPGLKVYLERKGELPKGLVLGLAAIITYYK GGVRADGAEIVPNDAPEIMNLLKELWATGCTQKVAEGVLAAESIWGENLNNIPGLTAAVKADLDSIQEKGMLETVKGIL
Sequences:
>Translated_479_residues MKALNKETAAKTQRPERIIQFGEGNFLRAFVDWIIYNMNEKTDFNSSVVVVQPIEKGMVDMLNAQDCLYHVNLQGLDKGQ VVNSLTKIDVISRALNPYSQNDEFMKLAEQPEMRFVISNTTEAGIAFDPACKLDDAPASSYPGKLTQLLYHRYKTFNGDK SKGLIIFPCELIFLNGHKLKETIYQYIDLWNLGEDFKQWFEEACGVYATLVDRIVPGFPRKDIAAIKEKLQYDDNLVVQA EIFHLWVIEAPQEVAKEFPADKAGLNVLFVPSEAPYHERKVTLLNGPHTVLSPVAYLSGINIVREACEHEVVGKYIHKVM FDELMETLNLPKEELKKFAEDVLERFNNPFVDHQVTSIMLNSFPKYETRDLPGLKVYLERKGELPKGLVLGLAAIITYYK GGVRADGAEIVPNDAPEIMNLLKELWATGCTQKVAEGVLAAESIWGENLNNIPGLTAAVKADLDSIQEKGMLETVKGIL >Mature_479_residues MKALNKETAAKTQRPERIIQFGEGNFLRAFVDWIIYNMNEKTDFNSSVVVVQPIEKGMVDMLNAQDCLYHVNLQGLDKGQ VVNSLTKIDVISRALNPYSQNDEFMKLAEQPEMRFVISNTTEAGIAFDPACKLDDAPASSYPGKLTQLLYHRYKTFNGDK SKGLIIFPCELIFLNGHKLKETIYQYIDLWNLGEDFKQWFEEACGVYATLVDRIVPGFPRKDIAAIKEKLQYDDNLVVQA EIFHLWVIEAPQEVAKEFPADKAGLNVLFVPSEAPYHERKVTLLNGPHTVLSPVAYLSGINIVREACEHEVVGKYIHKVM FDELMETLNLPKEELKKFAEDVLERFNNPFVDHQVTSIMLNSFPKYETRDLPGLKVYLERKGELPKGLVLGLAAIITYYK GGVRADGAEIVPNDAPEIMNLLKELWATGCTQKVAEGVLAAESIWGENLNNIPGLTAAVKADLDSIQEKGMLETVKGIL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI48994885, Length=482, Percent_Identity=46.0580912863071, Blast_Score=421, Evalue=1e-119, Organism=Escherichia coli, GI1788497, Length=499, Percent_Identity=25.4509018036072, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1790779, Length=485, Percent_Identity=25.5670103092783, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1787823, Length=482, Percent_Identity=25.7261410788382, Blast_Score=113, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6324401, Length=479, Percent_Identity=25.0521920668058, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6320765, Length=479, Percent_Identity=25.0521920668058, Blast_Score=98, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.58 [H]
Molecular weight: Translated: 53905; Mature: 53905
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALNKETAAKTQRPERIIQFGEGNFLRAFVDWIIYNMNEKTDFNSSVVVVQPIEKGMVD CCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHH MLNAQDCLYHVNLQGLDKGQVVNSLTKIDVISRALNPYSQNDEFMKLAEQPEMRFVISNT HHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECC TEAGIAFDPACKLDDAPASSYPGKLTQLLYHRYKTFNGDKSKGLIIFPCELIFLNGHKLK CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHH ETIYQYIDLWNLGEDFKQWFEEACGVYATLVDRIVPGFPRKDIAAIKEKLQYDDNLVVQA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE EIFHLWVIEAPQEVAKEFPADKAGLNVLFVPSEAPYHERKVTLLNGPHTVLSPVAYLSGI EEEEEEEECCHHHHHHHCCCCHHCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH NIVREACEHEVVGKYIHKVMFDELMETLNLPKEELKKFAEDVLERFNNPFVDHQVTSIML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NSFPKYETRDLPGLKVYLERKGELPKGLVLGLAAIITYYKGGVRADGAEIVPNDAPEIMN HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LLKELWATGCTQKVAEGVLAAESIWGENLNNIPGLTAAVKADLDSIQEKGMLETVKGIL HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MKALNKETAAKTQRPERIIQFGEGNFLRAFVDWIIYNMNEKTDFNSSVVVVQPIEKGMVD CCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHH MLNAQDCLYHVNLQGLDKGQVVNSLTKIDVISRALNPYSQNDEFMKLAEQPEMRFVISNT HHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECC TEAGIAFDPACKLDDAPASSYPGKLTQLLYHRYKTFNGDKSKGLIIFPCELIFLNGHKLK CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHH ETIYQYIDLWNLGEDFKQWFEEACGVYATLVDRIVPGFPRKDIAAIKEKLQYDDNLVVQA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE EIFHLWVIEAPQEVAKEFPADKAGLNVLFVPSEAPYHERKVTLLNGPHTVLSPVAYLSGI EEEEEEEECCHHHHHHHCCCCHHCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH NIVREACEHEVVGKYIHKVMFDELMETLNLPKEELKKFAEDVLERFNNPFVDHQVTSIML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NSFPKYETRDLPGLKVYLERKGELPKGLVLGLAAIITYYKGGVRADGAEIVPNDAPEIMN HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LLKELWATGCTQKVAEGVLAAESIWGENLNNIPGLTAAVKADLDSIQEKGMLETVKGIL HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]