| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005302
Identifier: 150005302
GI number: 150005302
Start: 3542319
End: 3544259
Strand: Direct
Name: 150005302
Synonym: BVU_2774
Alternate gene names: NA
Gene position: 3542319-3544259 (Clockwise)
Preceding gene: 150005296
Following gene: 150005303
Centisome position: 68.61
GC content: 44.05
Gene sequence:
>1941_bases ATGAGTTACTTACGATTTGACAAGACTCTTATGACGAACCTCGGGGAATCATTACCGAAAGAAATTCTCCGCACAAACCG TTCAGGGGCTTACCATTGTACAACCATTGTTGATTGCAATACGAGAAAATATCATGGATTGCTTGTCATTCCGGTGCCTG AGCTGGATGATGAAAACCATGTATTGTTATCGTCGTTGGATGAAACAGTGATACAACACGGCGCTGAATTTAACCTGGGG CTTCATAAGTATCAGGGTGACAATTACAGCCCCAGGGGACACAAGTATATCCGGGAATTCGAGTGTGAGAAAGTTCCTAC CACTATATACCGGGTAGGTGGTGTGATTCTGAAGAAGGAAAAGCTTTTCGTTCATCATGAAAATAGAATTTTAATCCGTT ATACTTTGCTGGAGGCACATTCGGCCACTACGTTGCGTTTGCGTCCGTTTCTGGCTTTCCGCAGCGTCCGTCAGTATACT CATGAGAACGCACAAGCCAGCCGTGACTATCAGGAGGTGGACAATGGGATCAAGACATGCATGTATCCGGGCTATCCCGA ATTATATATGCAATTGAACAAGAAGAACGAATTCCACTATCAGCCGGATTGGTATCGGGGAATTGAGTATCCCAAAGAGC AGGAGAGAGGATATGATTTTAATGAAGATTTGTATGTTCCGGGTTATTTTGAAGTGGACATAAAGAAAGGTGAAAGCATT GTCTTTTCAGGAGGTGTTTCCGAGGCCGGTACCCGTACATTAAAGAGAACCTTTGAAGAGGAGGTGGAAGAACGTACTCC GCGTGATAATTTCCAGCACTGTCTGATAAATGCTGCCCATCAGTTCTTAAATAAACAGGGAGATGAGTTTTATATTTTGG CAGGATATCCGTGGTTTAAATGCCGTGCGCGCGATATGTTTATTTCCCTGCCGGGACTGACATTGGCGATTGATGAAGTG GCTAAGTTTGAAATGGTGATGGAAACGGCCCGCAAGGCAATTCATGACTTTATTAATGATGAGCCTGATGATGTTAAAGT GTACGAAATGGAGCATCCTGATGTTTTGCTTTGGGCGGTGTGGTGTATCCAGCAATATGCCAAGATGGTGTCGCGTGACC AATGCCGTGAGAAATATGGTACATTGTTGCAGGACATTATGGAATACCTTCGCCGGGAGAATCATCCGAACCTTTTCTTG CATTCAAACGGTCTGCTATATGCCAACGGAACGGAAAAGGCTATCACATGGATGAATTCTACCGCAAACGGACGTCCTGT GATTCCTCGTACAGGCTATATCGTAGAAATTAATGCTTTGTGGTATAATGCCTTACGTTTTACAAGTGAACTGTTGGGCG AAGGTGGAAACAATAATTTGGCTGAAACGTTAAATGTATTGGCAGAAAAGACGGGAAAGGCTTTCGTGGATACTTTCTTG AATGAGTATGGTTATTTACTGGATTATGTGGATGGCAATATGATGGACTGGAGCGTGCGTCCGAACATGATATTTACTGT AGCATTCGACTATTCTCCGCTTGATGCCCGTCAGAAGAAAGGGGTGTTGGACATTGTGACCAAAGAACTGCTTACTCCGA AAGGGCTCCGTTCGCTCAGCCCGAAGAGTGGCGGTTACAACCCGAACTATGTAGGTCCTCAGATGCAGCGTGATTATGCT TATCATCAAGGTACCGCATGGCCTTGGCTGGCTGGCTTCTATTTTGAAGCTTACCTTCGTATTTATAAGATGAGTGGCAT AGGATTTGTGGAGCGTCAGCTGATAGGCTACGAAGACGAAATGACTTCTCATTGTATTGGCTCTATACCTGAACTGTTTG ATGGTAACCCGCCTTTCAAAGGTCGTGGAGCTGTATCATTCGCTATGAATGTGGCAGAGATATTGCGAGTATTATATTTA TTGAGTAAATACAATTATTGA
Upstream 100 bases:
>100_bases GCTTTATCCATTTAATTACTAATTTTGAGCGTTGCATACAAAAATAATATGTGACACAAATTGATATGGAAATTTGATTT ATAACCTTAAAATAACAACT
Downstream 100 bases:
>100_bases AAGGAGGGACCTGTATGAAAGTATTAATGTTTGGATGGGAATTTCCTCCCAAAATATATGGTGGTCTTGCTGTAGCATCT TACGGTATAACAAAAGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Amylo-Alpha-16-Glucosidase; Glycogen Debranching Protein; Glycogen Debranching -Related Protein; Glycogen Debranching ; 4-Alpha-Glucanotransferase; Amylo-Alpha-1 6-Glucosidase; Glyen Debranching; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Archaeal Type; Glycogen Debranching Isoform 1 Related Protein; Amylo-1 6-Glucosidase; AmylO-Alpha-16-Glucosidase; Glycogen Debranching Family Protein; Glycogen Debranching /Alpha-Amylase
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MSYLRFDKTLMTNLGESLPKEILRTNRSGAYHCTTIVDCNTRKYHGLLVIPVPELDDENHVLLSSLDETVIQHGAEFNLG LHKYQGDNYSPRGHKYIREFECEKVPTTIYRVGGVILKKEKLFVHHENRILIRYTLLEAHSATTLRLRPFLAFRSVRQYT HENAQASRDYQEVDNGIKTCMYPGYPELYMQLNKKNEFHYQPDWYRGIEYPKEQERGYDFNEDLYVPGYFEVDIKKGESI VFSGGVSEAGTRTLKRTFEEEVEERTPRDNFQHCLINAAHQFLNKQGDEFYILAGYPWFKCRARDMFISLPGLTLAIDEV AKFEMVMETARKAIHDFINDEPDDVKVYEMEHPDVLLWAVWCIQQYAKMVSRDQCREKYGTLLQDIMEYLRRENHPNLFL HSNGLLYANGTEKAITWMNSTANGRPVIPRTGYIVEINALWYNALRFTSELLGEGGNNNLAETLNVLAEKTGKAFVDTFL NEYGYLLDYVDGNMMDWSVRPNMIFTVAFDYSPLDARQKKGVLDIVTKELLTPKGLRSLSPKSGGYNPNYVGPQMQRDYA YHQGTAWPWLAGFYFEAYLRIYKMSGIGFVERQLIGYEDEMTSHCIGSIPELFDGNPPFKGRGAVSFAMNVAEILRVLYL LSKYNY
Sequences:
>Translated_646_residues MSYLRFDKTLMTNLGESLPKEILRTNRSGAYHCTTIVDCNTRKYHGLLVIPVPELDDENHVLLSSLDETVIQHGAEFNLG LHKYQGDNYSPRGHKYIREFECEKVPTTIYRVGGVILKKEKLFVHHENRILIRYTLLEAHSATTLRLRPFLAFRSVRQYT HENAQASRDYQEVDNGIKTCMYPGYPELYMQLNKKNEFHYQPDWYRGIEYPKEQERGYDFNEDLYVPGYFEVDIKKGESI VFSGGVSEAGTRTLKRTFEEEVEERTPRDNFQHCLINAAHQFLNKQGDEFYILAGYPWFKCRARDMFISLPGLTLAIDEV AKFEMVMETARKAIHDFINDEPDDVKVYEMEHPDVLLWAVWCIQQYAKMVSRDQCREKYGTLLQDIMEYLRRENHPNLFL HSNGLLYANGTEKAITWMNSTANGRPVIPRTGYIVEINALWYNALRFTSELLGEGGNNNLAETLNVLAEKTGKAFVDTFL NEYGYLLDYVDGNMMDWSVRPNMIFTVAFDYSPLDARQKKGVLDIVTKELLTPKGLRSLSPKSGGYNPNYVGPQMQRDYA YHQGTAWPWLAGFYFEAYLRIYKMSGIGFVERQLIGYEDEMTSHCIGSIPELFDGNPPFKGRGAVSFAMNVAEILRVLYL LSKYNY >Mature_645_residues SYLRFDKTLMTNLGESLPKEILRTNRSGAYHCTTIVDCNTRKYHGLLVIPVPELDDENHVLLSSLDETVIQHGAEFNLGL HKYQGDNYSPRGHKYIREFECEKVPTTIYRVGGVILKKEKLFVHHENRILIRYTLLEAHSATTLRLRPFLAFRSVRQYTH ENAQASRDYQEVDNGIKTCMYPGYPELYMQLNKKNEFHYQPDWYRGIEYPKEQERGYDFNEDLYVPGYFEVDIKKGESIV FSGGVSEAGTRTLKRTFEEEVEERTPRDNFQHCLINAAHQFLNKQGDEFYILAGYPWFKCRARDMFISLPGLTLAIDEVA KFEMVMETARKAIHDFINDEPDDVKVYEMEHPDVLLWAVWCIQQYAKMVSRDQCREKYGTLLQDIMEYLRRENHPNLFLH SNGLLYANGTEKAITWMNSTANGRPVIPRTGYIVEINALWYNALRFTSELLGEGGNNNLAETLNVLAEKTGKAFVDTFLN EYGYLLDYVDGNMMDWSVRPNMIFTVAFDYSPLDARQKKGVLDIVTKELLTPKGLRSLSPKSGGYNPNYVGPQMQRDYAY HQGTAWPWLAGFYFEAYLRIYKMSGIGFVERQLIGYEDEMTSHCIGSIPELFDGNPPFKGRGAVSFAMNVAEILRVLYLL SKYNY
Specific function: Unknown
COG id: COG3408
COG function: function code G; Glycogen debranching enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74859; Mature: 74728
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLRFDKTLMTNLGESLPKEILRTNRSGAYHCTTIVDCNTRKYHGLLVIPVPELDDENH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCC VLLSSLDETVIQHGAEFNLGLHKYQGDNYSPRGHKYIREFECEKVPTTIYRVGGVILKKE HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHCCEEEEEC KLFVHHENRILIRYTLLEAHSATTLRLRPFLAFRSVRQYTHENAQASRDYQEVDNGIKTC EEEEEECCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHEE MYPGYPELYMQLNKKNEFHYQPDWYRGIEYPKEQERGYDFNEDLYVPGYFEVDIKKGESI ECCCCHHHHHEECCCCCCCCCCCHHHCCCCCCHHHCCCCCCCCEECCCEEEEEEECCCEE VFSGGVSEAGTRTLKRTFEEEVEERTPRDNFQHCLINAAHQFLNKQGDEFYILAGYPWFK EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEE CRARDMFISLPGLTLAIDEVAKFEMVMETARKAIHDFINDEPDDVKVYEMEHPDVLLWAV EEECEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH WCIQQYAKMVSRDQCREKYGTLLQDIMEYLRRENHPNLFLHSNGLLYANGTEKAITWMNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCEEEEECC TANGRPVIPRTGYIVEINALWYNALRFTSELLGEGGNNNLAETLNVLAEKTGKAFVDTFL CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHH NEYGYLLDYVDGNMMDWSVRPNMIFTVAFDYSPLDARQKKGVLDIVTKELLTPKGLRSLS HHHCCEEEECCCCEEEEEECCCEEEEEEECCCCCCHHHHCCHHHHHHHHHCCCCCHHHCC PKSGGYNPNYVGPQMQRDYAYHQGTAWPWLAGFYFEAYLRIYKMSGIGFVERQLIGYEDE CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH MTSHCIGSIPELFDGNPPFKGRGAVSFAMNVAEILRVLYLLSKYNY HHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SYLRFDKTLMTNLGESLPKEILRTNRSGAYHCTTIVDCNTRKYHGLLVIPVPELDDENH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCC VLLSSLDETVIQHGAEFNLGLHKYQGDNYSPRGHKYIREFECEKVPTTIYRVGGVILKKE HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHCCEEEEEC KLFVHHENRILIRYTLLEAHSATTLRLRPFLAFRSVRQYTHENAQASRDYQEVDNGIKTC EEEEEECCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHEE MYPGYPELYMQLNKKNEFHYQPDWYRGIEYPKEQERGYDFNEDLYVPGYFEVDIKKGESI ECCCCHHHHHEECCCCCCCCCCCHHHCCCCCCHHHCCCCCCCCEECCCEEEEEEECCCEE VFSGGVSEAGTRTLKRTFEEEVEERTPRDNFQHCLINAAHQFLNKQGDEFYILAGYPWFK EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEE CRARDMFISLPGLTLAIDEVAKFEMVMETARKAIHDFINDEPDDVKVYEMEHPDVLLWAV EEECEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH WCIQQYAKMVSRDQCREKYGTLLQDIMEYLRRENHPNLFLHSNGLLYANGTEKAITWMNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCEEEEECC TANGRPVIPRTGYIVEINALWYNALRFTSELLGEGGNNNLAETLNVLAEKTGKAFVDTFL CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHH NEYGYLLDYVDGNMMDWSVRPNMIFTVAFDYSPLDARQKKGVLDIVTKELLTPKGLRSLS HHHCCEEEECCCCEEEEEECCCEEEEEEECCCCCCHHHHCCHHHHHHHHHCCCCCHHHCC PKSGGYNPNYVGPQMQRDYAYHQGTAWPWLAGFYFEAYLRIYKMSGIGFVERQLIGYEDE CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH MTSHCIGSIPELFDGNPPFKGRGAVSFAMNVAEILRVLYLLSKYNY HHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA