| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150005221
Identifier: 150005221
GI number: 150005221
Start: 3421256
End: 3422701
Strand: Direct
Name: 150005221
Synonym: BVU_2691
Alternate gene names: NA
Gene position: 3421256-3422701 (Clockwise)
Preceding gene: 150005220
Following gene: 150005222
Centisome position: 66.26
GC content: 39.35
Gene sequence:
>1446_bases ATGAAAAAAAATATAATTATATTAGGCTTGATTTCTTTATTGGCCGTATCGTGCGGGGATGATTTTTTAACTACTCATCC TGGTGATAGCGTTTCTACGGATTTGGCACTGAGTACAGAGCAGGATATAGATAATGCTGTGAATGGATTGTATGATTTGA TGTCCAGCTATGGCTATTATGGCGGAACCATGTTTTTTTATGGGGATATGAAAGGGGATGATATGCAGAGTTCTTATAAT AGCGGGAGAACTTGTAACCGGTGTTACTTATATGATCATCGCTCTACAAGCTTAAATGCCGGATATTTATGGGGACGTCC TTTTTATATTATCCGTAATGCATGGAATGTGATCAATGCGATTGATGATGGAAAAGTGCAAGGTTCAGAGCAAAGATTAA AGGAATTGAAAGGTGAGGCGATGACTATCATGGCACTTTGCCAGTTTGACTTGACCCGTTGTTTCGGTTATCCTTATACT AAGGATAAAGGGGCCGGTTGGGGAGCTCCAATTGTAGATCATGCAATTACATTAGATGAAAATCCGCCACGCAGCACTGT TGCAAAGGATTATGAGTTCATAATCAGTACATTGGAGGAGGCTATACCTTTAATGAGTACTTCTAAAAATAACAGCCGGA TGAATGCGTATGCTGCAAGAGCATTGCTGTCTCGTATTTATCTGTATCATGATGATAACGAGAAAGCGTTTCAAATGGCA AGCAACTTGATTGAAGAAGTGGAAGGAAATGGAATGTACCGTCTTTATACACGTGATGAATATGTTCCGGCATGGGATTT GAAAAATACGTTTGGTACGGAATCATTATTTGAAATTGCTAATAGTACAGATGATAATGGAGGACGAAGTTCATTGGCAT ATCTGATGCATTGGAATGGGTATCGTGAGATTTTTGCCACTCAGAAATTTGTGGATGAGTTATTGAGTGACCCGGAGGAT ATTCGCTGTCTGTTGCTGGAAAAGAATGTTTATAATAAAAATGATGTATGGTGGTTGAAGAAATGGCCGGGAACAGATGC TACGACTCCATCTTTTGAAAATAATTATGTTATTTTCCGTTTGTCTGAAGTCTATTTGAATGCGGCGGAAGCCGGAGTGA AAATAGGTGGGGCATCTGCCGTAAAAGGTTTGAATTATCTGAATGCAATTGTGCAGCGTGCTAATCCTGCAAAGGAAGTA ACGGCGGCTGAATATACATTGGATAGGGTGTTGGAAGAAAGAAGTAAAGAATTGATAGGTGAGGGGCATCGTTTCTTTGA TATGTTGAGAAATGGAAAGACCATTGTTCGTAAGGGAGGATATCATTTACCGGGTATCGTGGAGGAAATAGACTGGGATT ATTATAAATGTGTTTTACCGATTCCAACAGACCAGTTTACATTTAGTCCTGATATGGAGCAGAATCCGGGATATACTAAA AATTAA
Upstream 100 bases:
>100_bases TCCGGAGTTGAATGGAATTGTAAGTTATTTTACTCCTCCTCTTAAAACATTCGCATTTGGACTTGAACTTAAATTCTAAT CAATTAACACCGAACTGTTT
Downstream 100 bases:
>100_bases TTTTAAATAATTATTAAATGAGAGGGTGTGGTATCACACCCTTTTTTTGTGTGGACAAATTCTACATTCATGTGGATTTA TTCTACAATTTTACAGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Ragb/Susd DomaiN-Containing Protein; RagB/SusD Family Protein; Outer Membrane Receptor Protein; SusD Outer Membrane Protein; Tetratricopeptide Repeat Protein; Lipoprotein
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYYGGTMFFYGDMKGDDMQSSYN SGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINAIDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYT KDKGAGWGAPIVDHAITLDENPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNGYREIFATQKFVDELLSDPED IRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFRLSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEV TAAEYTLDRVLEERSKELIGEGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK N
Sequences:
>Translated_481_residues MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYYGGTMFFYGDMKGDDMQSSYN SGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINAIDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYT KDKGAGWGAPIVDHAITLDENPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNGYREIFATQKFVDELLSDPED IRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFRLSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEV TAAEYTLDRVLEERSKELIGEGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK N >Mature_481_residues MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYYGGTMFFYGDMKGDDMQSSYN SGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINAIDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYT KDKGAGWGAPIVDHAITLDENPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNGYREIFATQKFVDELLSDPED IRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFRLSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEV TAAEYTLDRVLEERSKELIGEGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54468; Mature: 54468
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYY CCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC GGTMFFYGDMKGDDMQSSYNSGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINA CCEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEECCCCEEEEEHHHHHHHC IDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYTKDKGAGWGAPIVDHAITLDE CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEECC NPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHH SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNG HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHEEEEEECCC YREIFATQKFVDELLSDPEDIRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFR HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE LSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEVTAAEYTLDRVLEERSKELIG EHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK CCHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCEECCCCCCCCCCCC N C >Mature Secondary Structure MKKNIIILGLISLLAVSCGDDFLTTHPGDSVSTDLALSTEQDIDNAVNGLYDLMSSYGYY CCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC GGTMFFYGDMKGDDMQSSYNSGRTCNRCYLYDHRSTSLNAGYLWGRPFYIIRNAWNVINA CCEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEECCCCEEEEEHHHHHHHC IDDGKVQGSEQRLKELKGEAMTIMALCQFDLTRCFGYPYTKDKGAGWGAPIVDHAITLDE CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEECC NPPRSTVAKDYEFIISTLEEAIPLMSTSKNNSRMNAYAARALLSRIYLYHDDNEKAFQMA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHH SNLIEEVEGNGMYRLYTRDEYVPAWDLKNTFGTESLFEIANSTDDNGGRSSLAYLMHWNG HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHEEEEEECCC YREIFATQKFVDELLSDPEDIRCLLLEKNVYNKNDVWWLKKWPGTDATTPSFENNYVIFR HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE LSEVYLNAAEAGVKIGGASAVKGLNYLNAIVQRANPAKEVTAAEYTLDRVLEERSKELIG EHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EGHRFFDMLRNGKTIVRKGGYHLPGIVEEIDWDYYKCVLPIPTDQFTFSPDMEQNPGYTK CCHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCEECCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA