| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is tkt [H]
Identifier: 150004855
GI number: 150004855
Start: 2991119
End: 2993131
Strand: Reverse
Name: tkt [H]
Synonym: BVU_2318
Alternate gene names: 150004855
Gene position: 2993131-2991119 (Counterclockwise)
Preceding gene: 150004856
Following gene: 150004854
Centisome position: 57.97
GC content: 48.24
Gene sequence:
>2013_bases ATGAACGAAAAGAAACTTATGAACCGTGCAGCGGACAACATCCGTATTCTGGCTGCTTCGATGGTAGAGAAAGCTAATTC AGGACACCCGGGTGGAGCTATGGGTGGCGCTGATTTTGTAAACGTGCTTTTCTCTGAGTTTTTAGTTTACGATCCTGAAA ATCCGCGTTGGGAAGGGCGTGACCGTTTCTTCCTTGATCCAGGCCACATGTCACCGATGCTGTATTCCACTTTGGCACTG ACCGGCAAGTTCACCATGGAAGAACTGGCACAGTTCCGCCAATGGGGCAGTCCGACTCCGGGACACCCTGAAGTGGACAT CATGCGCGGTATTGAAAATACTTCCGGCCCGTTAGGACAAGGACACACTTTTGCAGTAGGTGCTGCTATCGCTGCCAAAT TTCTGAAAGCCCGTCTGGGTCATGTCATGGACCAGACCATCTATGCCTATATATCCGATGGGGGTATTCAAGAAGAGATT TCTCAGGGTGCAGGCCGTCTGGCAGGTCATTTGGGGCTGGACAACTTGATCATGTTTTATGATTCAAACGACATCCAGCT GTCTACCGCTACCGATGCTGTTACCAGCGAAGATGTTGCCAAGAAATACGAAGCATGGCACTGGAAAGTAATTACCATCG ACGGTAATGATCCCGATGCAATCCGCACGGCTCTGACAGAAGCGAAAGCCGTAACCGGTCAGCCCACATTAATTATCGGT AAGACCATTATGGGTAAAGGCGCACGCAAAGCGGATGATTCCAGTTATGAACGTAACTGTGCCACCCACGGTGCTCCTTT GGGAGGTGATGCTTACATCAATACAATCAAAAACTTAGGCGGCGATCCAACCGATCCTTTCCAAATCTTCCCTGAAGTAA AAGAGTTGTATGCCAAACGTGCAGAGGAACTGAAAAAAATTGTTGCAGAAAAATATGCGGCTAAAACTGAATGGACTAAA GCTAACCCCGAACTGGCTGCTAAATTGGAACTATGGTTCTCTGGCAAAGCTCCGAAAGTAAATTGGAATGTTATCGAACA AAAAGCCGGAGATGCTACACGCAGCGCTTCTGCCAAAGTTCTCGGTGTACTGGCTACAGAAGTAGAAAACATGATCGTTT CTTCTGCCGACCTGTCAAATTCAGACAAGACCGACGGTTTCTTGAAGAAAACACATGCATTCACAAAAGACGACTTCACC GGTGCATTTCTGCAGGCAGGTGTTTCCGAATTAACCATGGCTTGCTGCTGCCTGGGTATGGCACTTCACGGAGGTGTGAT TGCTGCATGCGCTACCTTCTTCGTATTCTCAGACTACATGAAACCCGCCATACGTATGGCTGCCTTGATGGAACTTCCCG TCAAATTCATCTGGACACACGACGCATTCCGTGTAGGTGAAGACGGTCCTACTCACGAACCGGTAGAACAAGAAGCACAA ATCCGCCTGATGGAAAAACTGAAAAACCACAAAGGACACAATTCTATGTTGGTACTCCGTCCGGCAGATGCGGAAGAAAC CACTGTGGCATGGAAATTGGCCATGGAAAATACCAGCACCCCCACCGCACTGATCTTCTCCCGCCAGAATATCGCGAATC TGCCTGCAGGAAACGACTATTCACAGGCTGCCAAAGGCGCTTATATTGTTGCAGGCTCCGATGAAAATCCGGATGTAATC CTAGTCGCTTCAGGTTCCGAAGTTTCCACTTTGGAAGCAGGTGCAGAACTTCTCCGCAAGGATGGCATAAAAATACGTAT CGTATCCGCTCCTTCTGAGGGATTGTTCCGCAGCCAAAGCAAGGAATACCAAAACAGTATCATTCCCACAGGGGCTAAAG TATTCGGTCTGACTGCCGGTCTTCCTGTAAACCTTGAAGGTTTGGTAGGTGCCAACGGTAAGGTATTCGGTCTGGAATCA TTCGGATTCTCCGCTCCTTACAAAGTATTGGATGAAAAGCTGGGCTTTACCGCACAGAACGTGTATAACCAAGTAAAAGA AATGCTGGCATGA
Upstream 100 bases:
>100_bases TTGCGGTTTACACATAAAGAGTTATCTTTGCAGATATTAAATAAAATAGCAAAGATAAACCGACTCACTAATAGCATTCA AATTATAATATTATTTTAAT
Downstream 100 bases:
>100_bases AAAAAGTAGGACTGGCATCCGATCATGCAGGATTTGAACTGAAAGAGTTTGTAAAGACATGGTTAACTGAAAAAGGCTAT CCATGCAAAGATTTCGGTAC
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MNEKKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFFLDPGHMSPMLYSTLAL TGKFTMEELAQFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHTFAVGAAIAAKFLKARLGHVMDQTIYAYISDGGIQEEI SQGAGRLAGHLGLDNLIMFYDSNDIQLSTATDAVTSEDVAKKYEAWHWKVITIDGNDPDAIRTALTEAKAVTGQPTLIIG KTIMGKGARKADDSSYERNCATHGAPLGGDAYINTIKNLGGDPTDPFQIFPEVKELYAKRAEELKKIVAEKYAAKTEWTK ANPELAAKLELWFSGKAPKVNWNVIEQKAGDATRSASAKVLGVLATEVENMIVSSADLSNSDKTDGFLKKTHAFTKDDFT GAFLQAGVSELTMACCCLGMALHGGVIAACATFFVFSDYMKPAIRMAALMELPVKFIWTHDAFRVGEDGPTHEPVEQEAQ IRLMEKLKNHKGHNSMLVLRPADAEETTVAWKLAMENTSTPTALIFSRQNIANLPAGNDYSQAAKGAYIVAGSDENPDVI LVASGSEVSTLEAGAELLRKDGIKIRIVSAPSEGLFRSQSKEYQNSIIPTGAKVFGLTAGLPVNLEGLVGANGKVFGLES FGFSAPYKVLDEKLGFTAQNVYNQVKEMLA
Sequences:
>Translated_670_residues MNEKKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFFLDPGHMSPMLYSTLAL TGKFTMEELAQFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHTFAVGAAIAAKFLKARLGHVMDQTIYAYISDGGIQEEI SQGAGRLAGHLGLDNLIMFYDSNDIQLSTATDAVTSEDVAKKYEAWHWKVITIDGNDPDAIRTALTEAKAVTGQPTLIIG KTIMGKGARKADDSSYERNCATHGAPLGGDAYINTIKNLGGDPTDPFQIFPEVKELYAKRAEELKKIVAEKYAAKTEWTK ANPELAAKLELWFSGKAPKVNWNVIEQKAGDATRSASAKVLGVLATEVENMIVSSADLSNSDKTDGFLKKTHAFTKDDFT GAFLQAGVSELTMACCCLGMALHGGVIAACATFFVFSDYMKPAIRMAALMELPVKFIWTHDAFRVGEDGPTHEPVEQEAQ IRLMEKLKNHKGHNSMLVLRPADAEETTVAWKLAMENTSTPTALIFSRQNIANLPAGNDYSQAAKGAYIVAGSDENPDVI LVASGSEVSTLEAGAELLRKDGIKIRIVSAPSEGLFRSQSKEYQNSIIPTGAKVFGLTAGLPVNLEGLVGANGKVFGLES FGFSAPYKVLDEKLGFTAQNVYNQVKEMLA >Mature_670_residues MNEKKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFFLDPGHMSPMLYSTLAL TGKFTMEELAQFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHTFAVGAAIAAKFLKARLGHVMDQTIYAYISDGGIQEEI SQGAGRLAGHLGLDNLIMFYDSNDIQLSTATDAVTSEDVAKKYEAWHWKVITIDGNDPDAIRTALTEAKAVTGQPTLIIG KTIMGKGARKADDSSYERNCATHGAPLGGDAYINTIKNLGGDPTDPFQIFPEVKELYAKRAEELKKIVAEKYAAKTEWTK ANPELAAKLELWFSGKAPKVNWNVIEQKAGDATRSASAKVLGVLATEVENMIVSSADLSNSDKTDGFLKKTHAFTKDDFT GAFLQAGVSELTMACCCLGMALHGGVIAACATFFVFSDYMKPAIRMAALMELPVKFIWTHDAFRVGEDGPTHEPVEQEAQ IRLMEKLKNHKGHNSMLVLRPADAEETTVAWKLAMENTSTPTALIFSRQNIANLPAGNDYSQAAKGAYIVAGSDENPDVI LVASGSEVSTLEAGAELLRKDGIKIRIVSAPSEGLFRSQSKEYQNSIIPTGAKVFGLTAGLPVNLEGLVGANGKVFGLES FGFSAPYKVLDEKLGFTAQNVYNQVKEMLA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=598, Percent_Identity=27.5919732441472, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI4507521, Length=598, Percent_Identity=27.5919732441472, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI133778974, Length=606, Percent_Identity=24.7524752475248, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI225637459, Length=608, Percent_Identity=23.5197368421053, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI225637463, Length=499, Percent_Identity=24.4488977955912, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI225637461, Length=499, Percent_Identity=24.4488977955912, Blast_Score=90, Evalue=9e-18, Organism=Escherichia coli, GI1788808, Length=679, Percent_Identity=39.4698085419735, Blast_Score=433, Evalue=1e-122, Organism=Escherichia coli, GI48994911, Length=678, Percent_Identity=39.5280235988201, Blast_Score=417, Evalue=1e-118, Organism=Escherichia coli, GI1786304, Length=208, Percent_Identity=29.3269230769231, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17539652, Length=586, Percent_Identity=25.938566552901, Blast_Score=144, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6325331, Length=678, Percent_Identity=36.1356932153392, Blast_Score=356, Evalue=6e-99, Organism=Saccharomyces cerevisiae, GI6319593, Length=681, Percent_Identity=35.5359765051395, Blast_Score=341, Evalue=2e-94, Organism=Drosophila melanogaster, GI45551847, Length=676, Percent_Identity=25.5917159763314, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI45550715, Length=676, Percent_Identity=25.5917159763314, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24666278, Length=599, Percent_Identity=25.7095158597663, Blast_Score=149, Evalue=8e-36, Organism=Drosophila melanogaster, GI24645119, Length=647, Percent_Identity=25.5023183925811, Blast_Score=142, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 72464; Mature: 72464
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGR CCHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCC DRFFLDPGHMSPMLYSTLALTGKFTMEELAQFRQWGSPTPGHPEVDIMRGIENTSGPLGQ CEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC GHTFAVGAAIAAKFLKARLGHVMDQTIYAYISDGGIQEEISQGAGRLAGHLGLDNLIMFY CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEE DSNDIQLSTATDAVTSEDVAKKYEAWHWKVITIDGNDPDAIRTALTEAKAVTGQPTLIIG ECCCEEEEECCCHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE KTIMGKGARKADDSSYERNCATHGAPLGGDAYINTIKNLGGDPTDPFQIFPEVKELYAKR CHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AEELKKIVAEKYAAKTEWTKANPELAAKLELWFSGKAPKVNWNVIEQKAGDATRSASAKV HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHCCCHHH LGVLATEVENMIVSSADLSNSDKTDGFLKKTHAFTKDDFTGAFLQAGVSELTMACCCLGM HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHH ALHGGVIAACATFFVFSDYMKPAIRMAALMELPVKFIWTHDAFRVGEDGPTHEPVEQEAQ HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCHHHHHH IRLMEKLKNHKGHNSMLVLRPADAEETTVAWKLAMENTSTPTALIFSRQNIANLPAGNDY HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCH SQAAKGAYIVAGSDENPDVILVASGSEVSTLEAGAELLRKDGIKIRIVSAPSEGLFRSQS HHHHCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH KEYQNSIIPTGAKVFGLTAGLPVNLEGLVGANGKVFGLESFGFSAPYKVLDEKLGFTAQN HHHHHCCCCCCCHHEEEECCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHCCCHHH VYNQVKEMLA HHHHHHHHHC >Mature Secondary Structure MNEKKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGR CCHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCC DRFFLDPGHMSPMLYSTLALTGKFTMEELAQFRQWGSPTPGHPEVDIMRGIENTSGPLGQ CEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC GHTFAVGAAIAAKFLKARLGHVMDQTIYAYISDGGIQEEISQGAGRLAGHLGLDNLIMFY CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEE DSNDIQLSTATDAVTSEDVAKKYEAWHWKVITIDGNDPDAIRTALTEAKAVTGQPTLIIG ECCCEEEEECCCHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE KTIMGKGARKADDSSYERNCATHGAPLGGDAYINTIKNLGGDPTDPFQIFPEVKELYAKR CHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AEELKKIVAEKYAAKTEWTKANPELAAKLELWFSGKAPKVNWNVIEQKAGDATRSASAKV HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHCCCHHH LGVLATEVENMIVSSADLSNSDKTDGFLKKTHAFTKDDFTGAFLQAGVSELTMACCCLGM HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHH ALHGGVIAACATFFVFSDYMKPAIRMAALMELPVKFIWTHDAFRVGEDGPTHEPVEQEAQ HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCHHHHHH IRLMEKLKNHKGHNSMLVLRPADAEETTVAWKLAMENTSTPTALIFSRQNIANLPAGNDY HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCH SQAAKGAYIVAGSDENPDVILVASGSEVSTLEAGAELLRKDGIKIRIVSAPSEGLFRSQS HHHHCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH KEYQNSIIPTGAKVFGLTAGLPVNLEGLVGANGKVFGLESFGFSAPYKVLDEKLGFTAQN HHHHHCCCCCCCHHEEEECCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHCCCHHH VYNQVKEMLA HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]