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The map label for this gene is yfdZ [C]

Identifier: 150004812

GI number: 150004812

Start: 2942113

End: 2943417

Strand: Direct

Name: yfdZ [C]

Synonym: BVU_2275

Alternate gene names: 150004812

Gene position: 2942113-2943417 (Clockwise)

Preceding gene: 150004811

Following gene: 150004813

Centisome position: 56.98

GC content: 48.05

Gene sequence:

>1305_bases
ATGAAGATATTTAGTGAAGAATTAGTGGAGAAGGCGGTGAAGGAACTGCACATCGCCAATCTTGCACAGGCTACTATCGG
TGATGTGTTGTTGGTAGCCCAGTATCTGGAAAAGGAAACGGGGATTCCTTTTATCCGCATGGATCAGGGATCTCCTGGTC
TTGCCGCCAATCAGATAGGGATTGAAGCGGAGAAAGCTGCTTTGGACAGGGGAGTCGGATCGCAATATCCGGCTGCCGCA
GGAGTGCCCGAGTTGAAAAAGGAGGCTTCCCGTTTTGTAAAAGCTTTCTTGAATCTGGATATCTCTCCGCGCGCTTGTGT
GCCTACCACCGGGTCGGTGGCGGGTTCATTCGGCTCGTTCATAGCCTGTACGCAGCGTATTCCGGGGAAAGACAAGGTAT
TGTTCATTGATCCCGGATTTCCTATTCAGAAATCCCAGCTTCGCATTATCGGCGTGGAGTGGGAAGAGTTTGATATCTAT
CATTATCGTGGACAGGCCTTGCGTGAGAAATTGGAAAGTTTCCTGAGTAAAGGCGATATAGCAGCGATTATCTATTCTAA
TCCGAATAATCCGGCATGGATTTGTCTGGAAGAGGAGGAGTTGCAGATAATCGGTGAACTGGCAACCCGGTATGATGTGA
TTGTCATGGAAGATCTGGCTTATTTCTGCATGGATTTCCGTCGGGATATGGGGCATCCTTTCGAACCGCCTTATCCGCCC
ACTGTGGCAAGATATACGGATAATTATATCCTGATGCTTTCTTCTTCCAAGATATTCAGTTATGCCGGACAGCGTATGGC
ATTGGCATGTATCAGCGACAAACTGTTCGACCGCCAGTTCCCTGCCTTGGCAGAACGGTATAAAGATGCAGGGGTGTTCG
GTCCTACGCTGATTGCTTCCATTCTTTATATGATTACTTCGGGATGTACGGCTTCCACTCAGTATGCATACGCTGAAATG
CTTCGTCTGTCTACCGAAGGTAAAATCAATTTTGTGGAAGATACCCGCGAATATGCCCGTCGTGCGGAACGCATGAAGAA
AATATTTACCGACAATGGTTTCCATATCGTATATGACTATGATGCTACCCAGGTGGTGGGAGATGGTTTCTTCTTTACCA
TTGGTTACGGAAATATGACAGGGGGTGAATTGCTCCGGGAGTTATTGTATTATGGGGTAAGCAGCATCTCGCTTTCTACT
ACCGGCAGCGAGCAGGAAGGTGTCCGCGCCTGTACGTCACGGATGCGCGATGAACTTTATCCGGTGATGGAGGAACGCAT
GAGAGCTTTTCATGAAGATCATTGA

Upstream 100 bases:

>100_bases
AGCATAGGGCGTGTGTTTGCTGCAAAAGGTGAGAAGATTGTTGAAATGAATCAGAAGGCTTTTGATATAGGATTGAATGC
GGTAAAGAACTGGTAATGCC

Downstream 100 bases:

>100_bases
AAATAATGTGCTAATAGGATAATGTGCCGATTGCCATACAGTGGGTTTGTGTGCCAGTACATTGGCAGATTAGCACATTG
AAAAATTATTTATTATGATT

Product: putative aspartate aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKIFSEELVEKAVKELHIANLAQATIGDVLLVAQYLEKETGIPFIRMDQGSPGLAANQIGIEAEKAALDRGVGSQYPAAA
GVPELKKEASRFVKAFLNLDISPRACVPTTGSVAGSFGSFIACTQRIPGKDKVLFIDPGFPIQKSQLRIIGVEWEEFDIY
HYRGQALREKLESFLSKGDIAAIIYSNPNNPAWICLEEEELQIIGELATRYDVIVMEDLAYFCMDFRRDMGHPFEPPYPP
TVARYTDNYILMLSSSKIFSYAGQRMALACISDKLFDRQFPALAERYKDAGVFGPTLIASILYMITSGCTASTQYAYAEM
LRLSTEGKINFVEDTREYARRAERMKKIFTDNGFHIVYDYDATQVVGDGFFFTIGYGNMTGGELLRELLYYGVSSISLST
TGSEQEGVRACTSRMRDELYPVMEERMRAFHEDH

Sequences:

>Translated_434_residues
MKIFSEELVEKAVKELHIANLAQATIGDVLLVAQYLEKETGIPFIRMDQGSPGLAANQIGIEAEKAALDRGVGSQYPAAA
GVPELKKEASRFVKAFLNLDISPRACVPTTGSVAGSFGSFIACTQRIPGKDKVLFIDPGFPIQKSQLRIIGVEWEEFDIY
HYRGQALREKLESFLSKGDIAAIIYSNPNNPAWICLEEEELQIIGELATRYDVIVMEDLAYFCMDFRRDMGHPFEPPYPP
TVARYTDNYILMLSSSKIFSYAGQRMALACISDKLFDRQFPALAERYKDAGVFGPTLIASILYMITSGCTASTQYAYAEM
LRLSTEGKINFVEDTREYARRAERMKKIFTDNGFHIVYDYDATQVVGDGFFFTIGYGNMTGGELLRELLYYGVSSISLST
TGSEQEGVRACTSRMRDELYPVMEERMRAFHEDH
>Mature_434_residues
MKIFSEELVEKAVKELHIANLAQATIGDVLLVAQYLEKETGIPFIRMDQGSPGLAANQIGIEAEKAALDRGVGSQYPAAA
GVPELKKEASRFVKAFLNLDISPRACVPTTGSVAGSFGSFIACTQRIPGKDKVLFIDPGFPIQKSQLRIIGVEWEEFDIY
HYRGQALREKLESFLSKGDIAAIIYSNPNNPAWICLEEEELQIIGELATRYDVIVMEDLAYFCMDFRRDMGHPFEPPYPP
TVARYTDNYILMLSSSKIFSYAGQRMALACISDKLFDRQFPALAERYKDAGVFGPTLIASILYMITSGCTASTQYAYAEM
LRLSTEGKINFVEDTREYARRAERMKKIFTDNGFHIVYDYDATQVVGDGFFFTIGYGNMTGGELLRELLYYGVSSISLST
TGSEQEGVRACTSRMRDELYPVMEERMRAFHEDH

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1788722, Length=273, Percent_Identity=26.7399267399267, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 48670; Mature: 48670

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFSEELVEKAVKELHIANLAQATIGDVLLVAQYLEKETGIPFIRMDQGSPGLAANQIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHCC
IEAEKAALDRGVGSQYPAAAGVPELKKEASRFVKAFLNLDISPRACVPTTGSVAGSFGSF
CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHH
IACTQRIPGKDKVLFIDPGFPIQKSQLRIIGVEWEEFDIYHYRGQALREKLESFLSKGDI
HHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEHHHEEEEECCCHHHHHHHHHHHCCCCE
AAIIYSNPNNPAWICLEEEELQIIGELATRYDVIVMEDLAYFCMDFRRDMGHPFEPPYPP
EEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TVARYTDNYILMLSSSKIFSYAGQRMALACISDKLFDRQFPALAERYKDAGVFGPTLIAS
CHHEECCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH
ILYMITSGCTASTQYAYAEMLRLSTEGKINFVEDTREYARRAERMKKIFTDNGFHIVYDY
HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
DATQVVGDGFFFTIGYGNMTGGELLRELLYYGVSSISLSTTGSEQEGVRACTSRMRDELY
CCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
PVMEERMRAFHEDH
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKIFSEELVEKAVKELHIANLAQATIGDVLLVAQYLEKETGIPFIRMDQGSPGLAANQIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHCC
IEAEKAALDRGVGSQYPAAAGVPELKKEASRFVKAFLNLDISPRACVPTTGSVAGSFGSF
CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHH
IACTQRIPGKDKVLFIDPGFPIQKSQLRIIGVEWEEFDIYHYRGQALREKLESFLSKGDI
HHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEHHHEEEEECCCHHHHHHHHHHHCCCCE
AAIIYSNPNNPAWICLEEEELQIIGELATRYDVIVMEDLAYFCMDFRRDMGHPFEPPYPP
EEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TVARYTDNYILMLSSSKIFSYAGQRMALACISDKLFDRQFPALAERYKDAGVFGPTLIAS
CHHEECCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH
ILYMITSGCTASTQYAYAEMLRLSTEGKINFVEDTREYARRAERMKKIFTDNGFHIVYDY
HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
DATQVVGDGFFFTIGYGNMTGGELLRELLYYGVSSISLSTTGSEQEGVRACTSRMRDELY
CCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
PVMEERMRAFHEDH
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]