| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is melR [C]
Identifier: 150004633
GI number: 150004633
Start: 2708377
End: 2710128
Strand: Reverse
Name: melR [C]
Synonym: BVU_2093
Alternate gene names: 150004633
Gene position: 2710128-2708377 (Counterclockwise)
Preceding gene: 150004639
Following gene: 150004632
Centisome position: 52.49
GC content: 36.76
Gene sequence:
>1752_bases ATGAAACTAAAATGTCTTTTCTTACTGTTACTTTTGGGAATATCCTTTTGTGTACATGCACAAAAGCGCCCCGTCATCCT TGAGAAACAGTTGGAGATCATTAGGAAAGAACCTGATAACGGGGATGCATTAAAGTTTCTATGCCAATACTATTTAAATA AAGGAGATTATTCCAAAACCATCACTTACGCCGAGATTATGAAAAACGTAGCGGACAAGACTAAAAATCCTCTACTCCAA CTCTATTCATATATCTACCAAGCACAAGCACAAATGATGAGCGGACGGGAAAAAATAGCCAAAAAAAACTTGAACCTTTC TCTTGAACTAGCAACCAAACTGAATAATGACTCCACCCTTTGTTCCGTCTATGGTAGTCTCGGACTCTACTCTGCAAATA TTGAAACCGATTATTACCGTGCCATACGATGGCTTTATAAAGGTATCCAGTTGGCACAACAAAATAATTTCCAACAACAA TACGCTTTGCTTTTAGGCAATTTAGCAAACATCTATTACCTCAAAAAAGATACAGCCGGTATCAAATACGCATTAGAATG TTATGAATTAGGACACAGTATGCGTAATCCATACATCATTTATTCCGGTGCAGTAAATTCTGCCTATATGTATTTTTTAA TGAAACAGAATGAGGAAGCAATGAAATATATACATGAAGCCGAAACATTGATGCTGGAAAATGATTTCTACGACCAAGCC CATACCTACAATCTCTTTGGCAATATATTATATGATATGGGTGAATATGCCCAGGCCTTGGAATATTACAAAAAAGCCAT GAAGGACAAACAGGCGGCACAAACTTCCTCTATTGTCTATGCCCATTTGGGATATGCACGTATACTAATGCAGCAAAACA AACAACCAGAAGCTATTTTATTGTTAAAACAAGGAATAGCTATTTCTTATGCACGCGTCAACGCCATCCATCGCAATGAA CTATACGAAAATCTGTCCACCTGCTATGAGCAATTGCACCAATATCATGACGCACTGAAATATTATAAAATATTCCGTTT GGAAAACGACAGTCTTTTCAACAAGGACAAAGAAAGAGATTTAAGTGAAATGCGATTCAAATACGACTCTGAGCGGCAGG AAAATTTGATAAAACAAAGCAAACTGGATGTAATGCAGAAAGAACAGCGTATACAACAACAGACATTTATTCTTATTATC ATTGTGATTGTTCTAGGATTGCTTTATTACCTCTACCACCGTAAAAACAAACTTTATTTAAGTATAGTCAAGCAAAATCA AGAAGCAATCAAAAGAGAAACGGAACTGCATCGCCGTATAAAAGAATTGGAAACCAATGCCCCCTCCATGGTTTCTACTT CCGAAAAATATGCTTCCTCCTCACTCACCGACGAGAAAAGTTTAGAACTTTTCCGTACATTAGAGCGTATTATGAGAGAA GAAAAAATTTACAAAGACAATTTTATAACAAAAGACAAAGTAGCAGAAATATTAGGAACTAACCGTACTTATCTATCACG TATCATCAATGAACAATCCAAACTATCCTTCACTCATTATGTAAACCGTTTCCGTATTGAAGAAGCTATCCGTCTATTAT CCGACCCCAATAACGAAACTCCGCTGAAAGCCATTTCTACAGAGCTGGGATTTAACTCCATTTCCACCTTTTATAACCTT TTCCAATCCTCAGTGGGAATGACTCCCTCCCAATATAGGAACAAAGTTATGGAACTTCAAAAAGAGCAATAG
Upstream 100 bases:
>100_bases AGCGTTGCAAAGGTACGACTTTATTTTAAATATGCAAGACTTTTGAACAAGAAAAATTAAAGGTTTTATTATATTTGCAC TCTCAACCGAAAAAAAGCAT
Downstream 100 bases:
>100_bases GTTATCTTTTTGCTCTTTTTTTTATTCTGAAAACAGCAATTGCCGATATTAATATAGGTATAAAGAGGCATATCTAAGAT ATTATCCCTTACTTTGCGGT
Product: transcriptional regulator
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Response Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKLKCLFLLLLLGISFCVHAQKRPVILEKQLEIIRKEPDNGDALKFLCQYYLNKGDYSKTITYAEIMKNVADKTKNPLLQ LYSYIYQAQAQMMSGREKIAKKNLNLSLELATKLNNDSTLCSVYGSLGLYSANIETDYYRAIRWLYKGIQLAQQNNFQQQ YALLLGNLANIYYLKKDTAGIKYALECYELGHSMRNPYIIYSGAVNSAYMYFLMKQNEEAMKYIHEAETLMLENDFYDQA HTYNLFGNILYDMGEYAQALEYYKKAMKDKQAAQTSSIVYAHLGYARILMQQNKQPEAILLLKQGIAISYARVNAIHRNE LYENLSTCYEQLHQYHDALKYYKIFRLENDSLFNKDKERDLSEMRFKYDSERQENLIKQSKLDVMQKEQRIQQQTFILII IVIVLGLLYYLYHRKNKLYLSIVKQNQEAIKRETELHRRIKELETNAPSMVSTSEKYASSSLTDEKSLELFRTLERIMRE EKIYKDNFITKDKVAEILGTNRTYLSRIINEQSKLSFTHYVNRFRIEEAIRLLSDPNNETPLKAISTELGFNSISTFYNL FQSSVGMTPSQYRNKVMELQKEQ
Sequences:
>Translated_583_residues MKLKCLFLLLLLGISFCVHAQKRPVILEKQLEIIRKEPDNGDALKFLCQYYLNKGDYSKTITYAEIMKNVADKTKNPLLQ LYSYIYQAQAQMMSGREKIAKKNLNLSLELATKLNNDSTLCSVYGSLGLYSANIETDYYRAIRWLYKGIQLAQQNNFQQQ YALLLGNLANIYYLKKDTAGIKYALECYELGHSMRNPYIIYSGAVNSAYMYFLMKQNEEAMKYIHEAETLMLENDFYDQA HTYNLFGNILYDMGEYAQALEYYKKAMKDKQAAQTSSIVYAHLGYARILMQQNKQPEAILLLKQGIAISYARVNAIHRNE LYENLSTCYEQLHQYHDALKYYKIFRLENDSLFNKDKERDLSEMRFKYDSERQENLIKQSKLDVMQKEQRIQQQTFILII IVIVLGLLYYLYHRKNKLYLSIVKQNQEAIKRETELHRRIKELETNAPSMVSTSEKYASSSLTDEKSLELFRTLERIMRE EKIYKDNFITKDKVAEILGTNRTYLSRIINEQSKLSFTHYVNRFRIEEAIRLLSDPNNETPLKAISTELGFNSISTFYNL FQSSVGMTPSQYRNKVMELQKEQ >Mature_583_residues MKLKCLFLLLLLGISFCVHAQKRPVILEKQLEIIRKEPDNGDALKFLCQYYLNKGDYSKTITYAEIMKNVADKTKNPLLQ LYSYIYQAQAQMMSGREKIAKKNLNLSLELATKLNNDSTLCSVYGSLGLYSANIETDYYRAIRWLYKGIQLAQQNNFQQQ YALLLGNLANIYYLKKDTAGIKYALECYELGHSMRNPYIIYSGAVNSAYMYFLMKQNEEAMKYIHEAETLMLENDFYDQA HTYNLFGNILYDMGEYAQALEYYKKAMKDKQAAQTSSIVYAHLGYARILMQQNKQPEAILLLKQGIAISYARVNAIHRNE LYENLSTCYEQLHQYHDALKYYKIFRLENDSLFNKDKERDLSEMRFKYDSERQENLIKQSKLDVMQKEQRIQQQTFILII IVIVLGLLYYLYHRKNKLYLSIVKQNQEAIKRETELHRRIKELETNAPSMVSTSEKYASSSLTDEKSLELFRTLERIMRE EKIYKDNFITKDKVAEILGTNRTYLSRIINEQSKLSFTHYVNRFRIEEAIRLLSDPNNETPLKAISTELGFNSISTFYNL FQSSVGMTPSQYRNKVMELQKEQ
Specific function: Transcription Activator For The Expression Of The Melab Operon. Melr Binds At Two Sites Located Upstream Of The Melab Transcription Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68505; Mature: 68505
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKCLFLLLLLGISFCVHAQKRPVILEKQLEIIRKEPDNGDALKFLCQYYLNKGDYSKT CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH ITYAEIMKNVADKTKNPLLQLYSYIYQAQAQMMSGREKIAKKNLNLSLELATKLNNDSTL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH CSVYGSLGLYSANIETDYYRAIRWLYKGIQLAQQNNFQQQYALLLGNLANIYYLKKDTAG HHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCC IKYALECYELGHSMRNPYIIYSGAVNSAYMYFLMKQNEEAMKYIHEAETLMLENDFYDQA HHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHEEECCCCCHH HTYNLFGNILYDMGEYAQALEYYKKAMKDKQAAQTSSIVYAHLGYARILMQQNKQPEAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLKQGIAISYARVNAIHRNELYENLSTCYEQLHQYHDALKYYKIFRLENDSLFNKDKERD EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHCC LSEMRFKYDSERQENLIKQSKLDVMQKEQRIQQQTFILIIIVIVLGLLYYLYHRKNKLYL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE SIVKQNQEAIKRETELHRRIKELETNAPSMVSTSEKYASSSLTDEKSLELFRTLERIMRE HHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHH EKIYKDNFITKDKVAEILGTNRTYLSRIINEQSKLSFTHYVNRFRIEEAIRLLSDPNNET HHHHHCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PLKAISTELGFNSISTFYNLFQSSVGMTPSQYRNKVMELQKEQ CHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKLKCLFLLLLLGISFCVHAQKRPVILEKQLEIIRKEPDNGDALKFLCQYYLNKGDYSKT CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH ITYAEIMKNVADKTKNPLLQLYSYIYQAQAQMMSGREKIAKKNLNLSLELATKLNNDSTL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH CSVYGSLGLYSANIETDYYRAIRWLYKGIQLAQQNNFQQQYALLLGNLANIYYLKKDTAG HHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCC IKYALECYELGHSMRNPYIIYSGAVNSAYMYFLMKQNEEAMKYIHEAETLMLENDFYDQA HHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHEEECCCCCHH HTYNLFGNILYDMGEYAQALEYYKKAMKDKQAAQTSSIVYAHLGYARILMQQNKQPEAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLKQGIAISYARVNAIHRNELYENLSTCYEQLHQYHDALKYYKIFRLENDSLFNKDKERD EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHCC LSEMRFKYDSERQENLIKQSKLDVMQKEQRIQQQTFILIIIVIVLGLLYYLYHRKNKLYL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE SIVKQNQEAIKRETELHRRIKELETNAPSMVSTSEKYASSSLTDEKSLELFRTLERIMRE HHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHH EKIYKDNFITKDKVAEILGTNRTYLSRIINEQSKLSFTHYVNRFRIEEAIRLLSDPNNET HHHHHCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PLKAISTELGFNSISTFYNLFQSSVGMTPSQYRNKVMELQKEQ CHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA