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The map label for this gene is dsbD [H]

Identifier: 150004632

GI number: 150004632

Start: 2706211

End: 2708244

Strand: Reverse

Name: dsbD [H]

Synonym: BVU_2092

Alternate gene names: 150004632

Gene position: 2708244-2706211 (Counterclockwise)

Preceding gene: 150004633

Following gene: 150004631

Centisome position: 52.45

GC content: 41.84

Gene sequence:

>2034_bases
ATGAAAAAGAAGTTTTTTTTAAGTTGCCTCTTAATCGTTATGGCATTGCTTCCGGCAGTTGCCCAGATTCAAGATCCGGT
ACAATTCAAAACCGAGTTAAAGACGATTTCCGATACGGAAGCACAAATAGTATTCACTGGTAAGATTGATGCCGGATGGC
ACGTTTATTCCACTGATCTTCCTTCGGGAGGTCCTATCTCCGCAACTTTCAACGTAGACAAGATAGAAGGAGTAGAATTA
GTAGGAAAGCTCACTCCACAAGGTAAAGAAATTGAAAACTTCGACAAGGTGTTTGAAATGAAATTACGTTACTTTGAGAA
CACTGCCATTTTCATTCAGAAACTAAAAATAACGGGCGCTACCTATATGATAGAAGGTTATATGGAATTCGGTGCCTGCA
ACGATGAAAACTGTCTGCCTCCTACTGAAGTTTCTTTCTCTTTCTCCGGAAAAGGAGTTGCCGCTGCCACTACAAGCAAG
ACTACTGAACCTGCAAAAACAGAAACAGCCATAACGGAAGTTCCTGTAGCGGAAACAGCTACTGCAACTACCGCAACAGA
TAGTGCTACAACTGCCGCCCTGATCGGCAATGACACTGCTGTCCAAGATTATTGGACTCCGGTTATCCAAGAGCTGAACG
CATTTGGCGAAACGACATCACAACAAGACCGTTCATGGATTTACATCTTCTTTGCCGGGTTTATCGGTGGATTACTTGCC
TTATTTACGCCCTGTGTATGGCCTATCATCCCAATGACGGTAAGTTTCTTTTTAAAACGTAGCAAAGACAAAAAGAAAGG
AATCCGTGATGCATGGACATATGGTGCTTCTATCGTAGTGATCTATGTATTATTAGGTCTTGCCATAACCTTGATATTCG
GTGCCAGTGCCTTGAATGCACTTTCCACAAATGCTATTTTTAACATATTCTTCTGCTTGATGCTAATTGTGTTTGCAGCC
TCTTTCTTTGGAGCATTCGAACTTACTCTTCCTTCAAAATGGAGCAATGCAGTAGACAGTAAAGCGGAACAGACCAGTGG
TTTGTTAAGTATCTTCCTGATGGCATTCACCCTATCTTTGGTTTCATTCTCATGCACAGGTCCTATCATCGGCTTTTTGT
TGGTAGAAGTTTCCACTACAGGTAGTGTAGTTGCCCCTGCTATCGGCATGTTAGGTTTTGCTCTTGCATTAGCGTTGCCA
TTCACACTGTTTGCCATGTTCCCGTCTTGGCTGAAATCCATGCCTAAATCCGGTGGTTGGATGAATGTAATTAAAGTAGT
ATTAGGTTTCCTTGAGCTCGCATTTGCTTTGAAATTCCTGTCGGTTGCTGACTTGGCTTATGGATGGGGAATTCTAGACC
GTGAAACATTCCTTGCTTTGTGGATTGTGATTTTCGCTTTGCTAGGCTTCTATTTGCTGGGTAAGATCAAATTCCCTCAC
GATGATGATGATGATAAAGTAGGTGTTGCCCGTTTTTTTATGGCTCTTATCTCACTTGCATTTGCTGTATATATGGTACC
GGGCTTATGGGGTGCTCCTTTGAAAGCTGTCAGCGCATTTGCTCCTCCCATGAATACACAAGACTTCAACTTATACACCA
ATGAAGTACATGCGCAGTTTGATGACTACGATGCCGGTATGGAATATGCAAAACGTACCGGAAAACCGGTAATGCTTGAC
TTTACAGGTTACGGATGTGTAAATTGCCGTAAAATGGAAGCTGCTGTATGGACTGATCCGAAAGTAAACAAGTTGATGAC
TGAGGACTATGTACTGATTACATTGTTCGTTGATAACAAAACTCCATTGCCCGAACACATCAAAGTGATGGAGAACGGTA
AGGAACGTACACTACGCACGATCGGTGATAAATGGAGTTACCTGCAACGCTCTAAATTCGGTGCCAATGCACAACCTTTC
TATGTATTGATTGACAATGAGGGAAAACCGTTGAATAAATCATATTCATATGATGAGGATATAGACAAATATGTTGATTT
CCTCCAGACCGGATTACAAAACTATAAAAAATAA

Upstream 100 bases:

>100_bases
ACAGCAATTGCCGATATTAATATAGGTATAAAGAGGCATATCTAAGATATTATCCCTTACTTTGCGGTATGAACATTAAT
CCAAATTTAAATAATACGTA

Downstream 100 bases:

>100_bases
CCAAAGTGTGTCAAAAGTCGAAGGAGTGTCAAAACTAAATAAACCTATCATTTTATTCTTTCAGAATATTCTTTAATGAA
AAATATTCTGAAAATCAACA

Product: putative exported cytochrome C biogenesis-related protein

Products: NA

Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MKKKFFLSCLLIVMALLPAVAQIQDPVQFKTELKTISDTEAQIVFTGKIDAGWHVYSTDLPSGGPISATFNVDKIEGVEL
VGKLTPQGKEIENFDKVFEMKLRYFENTAIFIQKLKITGATYMIEGYMEFGACNDENCLPPTEVSFSFSGKGVAAATTSK
TTEPAKTETAITEVPVAETATATTATDSATTAALIGNDTAVQDYWTPVIQELNAFGETTSQQDRSWIYIFFAGFIGGLLA
LFTPCVWPIIPMTVSFFLKRSKDKKKGIRDAWTYGASIVVIYVLLGLAITLIFGASALNALSTNAIFNIFFCLMLIVFAA
SFFGAFELTLPSKWSNAVDSKAEQTSGLLSIFLMAFTLSLVSFSCTGPIIGFLLVEVSTTGSVVAPAIGMLGFALALALP
FTLFAMFPSWLKSMPKSGGWMNVIKVVLGFLELAFALKFLSVADLAYGWGILDRETFLALWIVIFALLGFYLLGKIKFPH
DDDDDKVGVARFFMALISLAFAVYMVPGLWGAPLKAVSAFAPPMNTQDFNLYTNEVHAQFDDYDAGMEYAKRTGKPVMLD
FTGYGCVNCRKMEAAVWTDPKVNKLMTEDYVLITLFVDNKTPLPEHIKVMENGKERTLRTIGDKWSYLQRSKFGANAQPF
YVLIDNEGKPLNKSYSYDEDIDKYVDFLQTGLQNYKK

Sequences:

>Translated_677_residues
MKKKFFLSCLLIVMALLPAVAQIQDPVQFKTELKTISDTEAQIVFTGKIDAGWHVYSTDLPSGGPISATFNVDKIEGVEL
VGKLTPQGKEIENFDKVFEMKLRYFENTAIFIQKLKITGATYMIEGYMEFGACNDENCLPPTEVSFSFSGKGVAAATTSK
TTEPAKTETAITEVPVAETATATTATDSATTAALIGNDTAVQDYWTPVIQELNAFGETTSQQDRSWIYIFFAGFIGGLLA
LFTPCVWPIIPMTVSFFLKRSKDKKKGIRDAWTYGASIVVIYVLLGLAITLIFGASALNALSTNAIFNIFFCLMLIVFAA
SFFGAFELTLPSKWSNAVDSKAEQTSGLLSIFLMAFTLSLVSFSCTGPIIGFLLVEVSTTGSVVAPAIGMLGFALALALP
FTLFAMFPSWLKSMPKSGGWMNVIKVVLGFLELAFALKFLSVADLAYGWGILDRETFLALWIVIFALLGFYLLGKIKFPH
DDDDDKVGVARFFMALISLAFAVYMVPGLWGAPLKAVSAFAPPMNTQDFNLYTNEVHAQFDDYDAGMEYAKRTGKPVMLD
FTGYGCVNCRKMEAAVWTDPKVNKLMTEDYVLITLFVDNKTPLPEHIKVMENGKERTLRTIGDKWSYLQRSKFGANAQPF
YVLIDNEGKPLNKSYSYDEDIDKYVDFLQTGLQNYKK
>Mature_677_residues
MKKKFFLSCLLIVMALLPAVAQIQDPVQFKTELKTISDTEAQIVFTGKIDAGWHVYSTDLPSGGPISATFNVDKIEGVEL
VGKLTPQGKEIENFDKVFEMKLRYFENTAIFIQKLKITGATYMIEGYMEFGACNDENCLPPTEVSFSFSGKGVAAATTSK
TTEPAKTETAITEVPVAETATATTATDSATTAALIGNDTAVQDYWTPVIQELNAFGETTSQQDRSWIYIFFAGFIGGLLA
LFTPCVWPIIPMTVSFFLKRSKDKKKGIRDAWTYGASIVVIYVLLGLAITLIFGASALNALSTNAIFNIFFCLMLIVFAA
SFFGAFELTLPSKWSNAVDSKAEQTSGLLSIFLMAFTLSLVSFSCTGPIIGFLLVEVSTTGSVVAPAIGMLGFALALALP
FTLFAMFPSWLKSMPKSGGWMNVIKVVLGFLELAFALKFLSVADLAYGWGILDRETFLALWIVIFALLGFYLLGKIKFPH
DDDDDKVGVARFFMALISLAFAVYMVPGLWGAPLKAVSAFAPPMNTQDFNLYTNEVHAQFDDYDAGMEYAKRTGKPVMLD
FTGYGCVNCRKMEAAVWTDPKVNKLMTEDYVLITLFVDNKTPLPEHIKVMENGKERTLRTIGDKWSYLQRSKFGANAQPF
YVLIDNEGKPLNKSYSYDEDIDKYVDFLQTGLQNYKK

Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a

COG id: COG4232

COG function: function code OC; Thiol:disulfide interchange protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1790578, Length=379, Percent_Identity=25.8575197889182, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834
- InterPro:   IPR022910
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]

EC number: =1.8.1.8 [H]

Molecular weight: Translated: 74732; Mature: 74732

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFFLSCLLIVMALLPAVAQIQDPVQFKTELKTISDTEAQIVFTGKIDAGWHVYSTDL
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCC
PSGGPISATFNVDKIEGVELVGKLTPQGKEIENFDKVFEMKLRYFENTAIFIQKLKITGA
CCCCCEEEEECCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCC
TYMIEGYMEFGACNDENCLPPTEVSFSFSGKGVAAATTSKTTEPAKTETAITEVPVAETA
EEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCCCCCC
TATTATDSATTAALIGNDTAVQDYWTPVIQELNAFGETTSQQDRSWIYIFFAGFIGGLLA
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHH
LFTPCVWPIIPMTVSFFLKRSKDKKKGIRDAWTYGASIVVIYVLLGLAITLIFGASALNA
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTNAIFNIFFCLMLIVFAASFFGAFELTLPSKWSNAVDSKAEQTSGLLSIFLMAFTLSL
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFSCTGPIIGFLLVEVSTTGSVVAPAIGMLGFALALALPFTLFAMFPSWLKSMPKSGGW
HHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
MNVIKVVLGFLELAFALKFLSVADLAYGWGILDRETFLALWIVIFALLGFYLLGKIKFPH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
DDDDDKVGVARFFMALISLAFAVYMVPGLWGAPLKAVSAFAPPMNTQDFNLYTNEVHAQF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHCCC
DDYDAGMEYAKRTGKPVMLDFTGYGCVNCRKMEAAVWTDPKVNKLMTEDYVLITLFVDNK
CCHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCEECCCCCHHHHHCCCEEEEEEEECCC
TPLPEHIKVMENGKERTLRTIGDKWSYLQRSKFGANAQPFYVLIDNEGKPLNKSYSYDED
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHH
IDKYVDFLQTGLQNYKK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKFFLSCLLIVMALLPAVAQIQDPVQFKTELKTISDTEAQIVFTGKIDAGWHVYSTDL
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCC
PSGGPISATFNVDKIEGVELVGKLTPQGKEIENFDKVFEMKLRYFENTAIFIQKLKITGA
CCCCCEEEEECCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCC
TYMIEGYMEFGACNDENCLPPTEVSFSFSGKGVAAATTSKTTEPAKTETAITEVPVAETA
EEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCCCCCC
TATTATDSATTAALIGNDTAVQDYWTPVIQELNAFGETTSQQDRSWIYIFFAGFIGGLLA
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHH
LFTPCVWPIIPMTVSFFLKRSKDKKKGIRDAWTYGASIVVIYVLLGLAITLIFGASALNA
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTNAIFNIFFCLMLIVFAASFFGAFELTLPSKWSNAVDSKAEQTSGLLSIFLMAFTLSL
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFSCTGPIIGFLLVEVSTTGSVVAPAIGMLGFALALALPFTLFAMFPSWLKSMPKSGGW
HHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
MNVIKVVLGFLELAFALKFLSVADLAYGWGILDRETFLALWIVIFALLGFYLLGKIKFPH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
DDDDDKVGVARFFMALISLAFAVYMVPGLWGAPLKAVSAFAPPMNTQDFNLYTNEVHAQF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHCCC
DDYDAGMEYAKRTGKPVMLDFTGYGCVNCRKMEAAVWTDPKVNKLMTEDYVLITLFVDNK
CCHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCEECCCCCHHHHHCCCEEEEEEEECCC
TPLPEHIKVMENGKERTLRTIGDKWSYLQRSKFGANAQPFYVLIDNEGKPLNKSYSYDED
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHH
IDKYVDFLQTGLQNYKK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA