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The map label for this gene is ygcF [C]

Identifier: 150004624

GI number: 150004624

Start: 2695963

End: 2696508

Strand: Direct

Name: ygcF [C]

Synonym: BVU_2083

Alternate gene names: 150004624

Gene position: 2695963-2696508 (Clockwise)

Preceding gene: 150004623

Following gene: 150004629

Centisome position: 52.22

GC content: 39.74

Gene sequence:

>546_bases
ATGAGAAGGATTAATGAAATATTTTACAGCTTACAGGGGGAGGGGTATCATACTGGAATACCTGCCGTTTTTGTACGTTT
TTCCGGGTGCAATTTGAGATGTCCTTTTTGCGATACTCAGCATGAAGAAGGTACATTGATGAGTGATGAGGATATTGTGA
TGGAAGTGGCAAAATATTCGACCCAGGTAGTAATACTGACTGGTGGTGAGCCAGGATTGTGGATTGATGAAAAGTTAGTT
GATGCATTGCATCATGAAGGGAAGTATGTTTGTATTGAGACAAACGGCACTTGTCTGCTGCCTGAAAATATAGATTGGGT
TACTTGTTCCCCTAAAGAAGGGGCGAAAATAAATCTAGATCGTATAGATGAGGTGAAAGTGGTTTATGTGGGACAAGATG
TTTCTGCTTATTTGGATTTGTCTGCCAGTCATTATTTTTTGCAGCCTTGTTCTTGTGCTAATACAGAAGAAGTGATTGCT
TACATTTTGCAACATCCAGAGTGGCGGTTGAGCCTACAAACTCATAAACTTTTGCAAATTCCTTAA

Upstream 100 bases:

>100_bases
TTTAATCCTACAGCTGAAAATATTGCACGCTGGGTATGTGAGCAAATTCCCACTTGTTTCAAGGTTGAAGTTCGCGAGTC
AGAAGGAAATACCGTTATCT

Downstream 100 bases:

>100_bases
GAAAGTAGAAGATATAAAAAAAGATTATCCAATGGCGTGGCATTGAATAATCTTTTTTGCACGGGAGGAGAGGCTCGAAC
TCCCGACACCCGGTTTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRRINEIFYSLQGEGYHTGIPAVFVRFSGCNLRCPFCDTQHEEGTLMSDEDIVMEVAKYSTQVVILTGGEPGLWIDEKLV
DALHHEGKYVCIETNGTCLLPENIDWVTCSPKEGAKINLDRIDEVKVVYVGQDVSAYLDLSASHYFLQPCSCANTEEVIA
YILQHPEWRLSLQTHKLLQIP

Sequences:

>Translated_181_residues
MRRINEIFYSLQGEGYHTGIPAVFVRFSGCNLRCPFCDTQHEEGTLMSDEDIVMEVAKYSTQVVILTGGEPGLWIDEKLV
DALHHEGKYVCIETNGTCLLPENIDWVTCSPKEGAKINLDRIDEVKVVYVGQDVSAYLDLSASHYFLQPCSCANTEEVIA
YILQHPEWRLSLQTHKLLQIP
>Mature_181_residues
MRRINEIFYSLQGEGYHTGIPAVFVRFSGCNLRCPFCDTQHEEGTLMSDEDIVMEVAKYSTQVVILTGGEPGLWIDEKLV
DALHHEGKYVCIETNGTCLLPENIDWVTCSPKEGAKINLDRIDEVKVVYVGQDVSAYLDLSASHYFLQPCSCANTEEVIA
YILQHPEWRLSLQTHKLLQIP

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789139, Length=219, Percent_Identity=33.7899543378995, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 20465; Mature: 20465

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRINEIFYSLQGEGYHTGIPAVFVRFSGCNLRCPFCDTQHEEGTLMSDEDIVMEVAKYS
CCHHHEEHEEECCCCEECCCCEEEEEECCCEEECCCCCCCCCCCCEECCHHHHHHHHHCC
TQVVILTGGEPGLWIDEKLVDALHHEGKYVCIETNGTCLLPENIDWVTCSPKEGAKINLD
EEEEEEECCCCCCEECHHHHHHHHCCCCEEEEECCCCEECCCCCCEEEECCCCCCEEECC
RIDEVKVVYVGQDVSAYLDLSASHYFLQPCSCANTEEVIAYILQHPEWRLSLQTHKLLQI
CCCEEEEEEECCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCEEEEC
P
C
>Mature Secondary Structure
MRRINEIFYSLQGEGYHTGIPAVFVRFSGCNLRCPFCDTQHEEGTLMSDEDIVMEVAKYS
CCHHHEEHEEECCCCEECCCCEEEEEECCCEEECCCCCCCCCCCCEECCHHHHHHHHHCC
TQVVILTGGEPGLWIDEKLVDALHHEGKYVCIETNGTCLLPENIDWVTCSPKEGAKINLD
EEEEEEECCCCCCEECHHHHHHHHCCCCEEEEECCCCEECCCCCCEEEECCCCCCEEECC
RIDEVKVVYVGQDVSAYLDLSASHYFLQPCSCANTEEVIAYILQHPEWRLSLQTHKLLQI
CCCEEEEEEECCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCEEEEC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]