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The map label for this gene is yjbR [H]

Identifier: 150004431

GI number: 150004431

Start: 2453684

End: 2454040

Strand: Reverse

Name: yjbR [H]

Synonym: BVU_1878

Alternate gene names: 150004431

Gene position: 2454040-2453684 (Counterclockwise)

Preceding gene: 150004432

Following gene: 150004430

Centisome position: 47.53

GC content: 37.25

Gene sequence:

>357_bases
ATGGACATAGAAACAATACGCGATTACTGTATCAGAAAGAAAGGAACAACAGAAGAATTCCCTTTTGACAATGTCACCTT
AGTATTCAAAGTCATGGGGAAAATGTATGCCTGTATCGGATTGGACAACCCGGGATGGCTATCTTTAAAATGTGCACCCG
AATATGCCTTGGAATTAAGAGAACATCATTCCGGCATTGAAGGAGCCTATCACTTCAATAAGAAATATTGGAACCAAGTA
TCCTTACAAGGTAACATTGACGACAAACTTATTTTATCACTGATAGACCACTCATACGAAGAGGTTATCAAAAAATTCAC
CCGTAAACTTAAAAAAGAATATGATGAGATCCCCTAA

Upstream 100 bases:

>100_bases
TTGATATCATCACCTTAGTGGGCGAAAAGACTCCTTTCACTATAGAGCATATTGAAGAAGCCTTTTATCCTCCGATTTGG
TAAAAATATATATATTATAT

Downstream 100 bases:

>100_bases
CTGGTCAAGCAAAATCTTAAAAGAAGAAACCGTAACCTCAACAAATGACCGACTTGCAGAACTTTGCCAGGAAAAAGAAA
TCAAGGAATTCACCACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MDIETIRDYCIRKKGTTEEFPFDNVTLVFKVMGKMYACIGLDNPGWLSLKCAPEYALELREHHSGIEGAYHFNKKYWNQV
SLQGNIDDKLILSLIDHSYEEVIKKFTRKLKKEYDEIP

Sequences:

>Translated_118_residues
MDIETIRDYCIRKKGTTEEFPFDNVTLVFKVMGKMYACIGLDNPGWLSLKCAPEYALELREHHSGIEGAYHFNKKYWNQV
SLQGNIDDKLILSLIDHSYEEVIKKFTRKLKKEYDEIP
>Mature_118_residues
MDIETIRDYCIRKKGTTEEFPFDNVTLVFKVMGKMYACIGLDNPGWLSLKCAPEYALELREHHSGIEGAYHFNKKYWNQV
SLQGNIDDKLILSLIDHSYEEVIKKFTRKLKKEYDEIP

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367342, Length=113, Percent_Identity=30.9734513274336, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 13864; Mature: 13864

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIETIRDYCIRKKGTTEEFPFDNVTLVFKVMGKMYACIGLDNPGWLSLKCAPEYALELR
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
EHHSGIEGAYHFNKKYWNQVSLQGNIDDKLILSLIDHSYEEVIKKFTRKLKKEYDEIP
HHCCCCCCHHHCCHHHHCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIETIRDYCIRKKGTTEEFPFDNVTLVFKVMGKMYACIGLDNPGWLSLKCAPEYALELR
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
EHHSGIEGAYHFNKKYWNQVSLQGNIDDKLILSLIDHSYEEVIKKFTRKLKKEYDEIP
HHCCCCCCHHHCCHHHHCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]