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The map label for this gene is dinF [H]

Identifier: 150004427

GI number: 150004427

Start: 2448322

End: 2449647

Strand: Reverse

Name: dinF [H]

Synonym: BVU_1874

Alternate gene names: 150004427

Gene position: 2449647-2448322 (Counterclockwise)

Preceding gene: 150004429

Following gene: 150004426

Centisome position: 47.44

GC content: 43.44

Gene sequence:

>1326_bases
ATGATTCAACTTAATAACGGAAACAAAAAAATACTTCAAATAGCCATCCCTTCTATCGTTTCAAACATTACAGTTCCTCT
GTTGGGCTTGATTGATGTTACTATTGTAGGTCATTTGGGCTCTGCCGCCTACATCGGAGCGATAGCTGTAGGCGGAATGC
TTTTCAACATCATCTACTGGATTTTCGGTTTTCTGCGTATGGGAACCAGCGGCATGACTTCACAAGCATACGGCAGGCAC
GACCTGAATGAAGTCACCCGGTTACTACTCCGTTCCGTCGGAGTAGGATTATTCATTGCATTTACTTTGCTAGCCTTGCA
ATATCCTATAGAAAGAACCGCCTTCACCTTTATCCAAACGACTGAAGAAGTAGAACATCTGGCGTCCCTCTATTTCTATA
TCTGTATTTGGGGAGCACCGGCTGTATTAGGGCTTTACAGTTTTGCCGGCTGGTATATCGGTATGCAAAATTCCCGTTTC
CCCATGTATATAGCCATCACACAAAATATAGTGAACATTGCGGTCAGTCTTCTTCTTGTATATGGATTAGGAATGAAAAT
AGAAGGTGTCGCCATCGGAACGTTAACTGCACAATATGCCGGGCTAGTCATGGCATATTTGTTGTGGTTACGCTACTACA
GCACCCTGCGGAAACGCATAGAATGGCATTCCTTCTTTGACAAACAGGCCATGTACCGTTTCTTCCAAGTAAACAGGGAT
ATCTTTTTCCGTACCATCTGCCTGGTAGCGGTTACTGTCTTTTTCACCTCGGCTGGTGCGGCACAAGGAGAAGTGGTGTT
GGCGGTCAATACATTACTTATGCAATTATTCACTTTATTCTCCTACATTATGGACGGCTTCGCATACGCCGGAGAAGCAT
TGGCAGGAAGATATATCGGAGCCAATAATCAGAAAGCACTCCACACGACGGTTCGCCAACTATTCGGCTGGGGAGTAGGA
TTATCGCTTGCTTTCACCTTATTATATAGTATAGGGGGACAATCCTTTCTCGGATTACTGACTGACGAAACAACTGTCAT
TCATGCTTCCGAAAGTTATTTTTATTGGGTACTTGCCATTCCTTTGGCAGGCTTCTCTGCTTTTTTGTTCGATGGAATAT
TCATCGGTGCGACAGCCACCCATCTGATGCTGAAAGCTATGATAGTAGCCTCTGTCAGTTTCTTTCTTATTTACTATGGT
TTCCGGGGGACAATGGGCAATCACGCTTTATGGATGGCATTCATTACCTATCTTCTACTTCGCGGAGTAATGCAAGGAGT
CATGGGAAGAAATATTTTAGGATATAAAACAAGTAAAAAAGATTAA

Upstream 100 bases:

>100_bases
TCATCTTAAACAACAACTATTTTCAATTCAAATTTAAATTTTCATTGGTTATTTATGAGAAAGAGAGTACCTTTGTATCC
ATCTCTATCAATCTACACTC

Downstream 100 bases:

>100_bases
TATTTTTATCTTTGCAAAAAACTAAAAGACAAACCAATATGGCAAGATTTAAAAGAATTCTACTGAAGCTGAGCGGCGAA
AGCCTGATGGGCGAAAAGCA

Product: DNA-damage-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MIQLNNGNKKILQIAIPSIVSNITVPLLGLIDVTIVGHLGSAAYIGAIAVGGMLFNIIYWIFGFLRMGTSGMTSQAYGRH
DLNEVTRLLLRSVGVGLFIAFTLLALQYPIERTAFTFIQTTEEVEHLASLYFYICIWGAPAVLGLYSFAGWYIGMQNSRF
PMYIAITQNIVNIAVSLLLVYGLGMKIEGVAIGTLTAQYAGLVMAYLLWLRYYSTLRKRIEWHSFFDKQAMYRFFQVNRD
IFFRTICLVAVTVFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYAGEALAGRYIGANNQKALHTTVRQLFGWGVG
LSLAFTLLYSIGGQSFLGLLTDETTVIHASESYFYWVLAIPLAGFSAFLFDGIFIGATATHLMLKAMIVASVSFFLIYYG
FRGTMGNHALWMAFITYLLLRGVMQGVMGRNILGYKTSKKD

Sequences:

>Translated_441_residues
MIQLNNGNKKILQIAIPSIVSNITVPLLGLIDVTIVGHLGSAAYIGAIAVGGMLFNIIYWIFGFLRMGTSGMTSQAYGRH
DLNEVTRLLLRSVGVGLFIAFTLLALQYPIERTAFTFIQTTEEVEHLASLYFYICIWGAPAVLGLYSFAGWYIGMQNSRF
PMYIAITQNIVNIAVSLLLVYGLGMKIEGVAIGTLTAQYAGLVMAYLLWLRYYSTLRKRIEWHSFFDKQAMYRFFQVNRD
IFFRTICLVAVTVFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYAGEALAGRYIGANNQKALHTTVRQLFGWGVG
LSLAFTLLYSIGGQSFLGLLTDETTVIHASESYFYWVLAIPLAGFSAFLFDGIFIGATATHLMLKAMIVASVSFFLIYYG
FRGTMGNHALWMAFITYLLLRGVMQGVMGRNILGYKTSKKD
>Mature_441_residues
MIQLNNGNKKILQIAIPSIVSNITVPLLGLIDVTIVGHLGSAAYIGAIAVGGMLFNIIYWIFGFLRMGTSGMTSQAYGRH
DLNEVTRLLLRSVGVGLFIAFTLLALQYPIERTAFTFIQTTEEVEHLASLYFYICIWGAPAVLGLYSFAGWYIGMQNSRF
PMYIAITQNIVNIAVSLLLVYGLGMKIEGVAIGTLTAQYAGLVMAYLLWLRYYSTLRKRIEWHSFFDKQAMYRFFQVNRD
IFFRTICLVAVTVFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYAGEALAGRYIGANNQKALHTTVRQLFGWGVG
LSLAFTLLYSIGGQSFLGLLTDETTVIHASESYFYWVLAIPLAGFSAFLFDGIFIGATATHLMLKAMIVASVSFFLIYYG
FRGTMGNHALWMAFITYLLLRGVMQGVMGRNILGYKTSKKD

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=437, Percent_Identity=34.7826086956522, Blast_Score=218, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48969; Mature: 48969

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLNNGNKKILQIAIPSIVSNITVPLLGLIDVTIVGHLGSAAYIGAIAVGGMLFNIIYW
CEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IFGFLRMGTSGMTSQAYGRHDLNEVTRLLLRSVGVGLFIAFTLLALQYPIERTAFTFIQT
HHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TEEVEHLASLYFYICIWGAPAVLGLYSFAGWYIGMQNSRFPMYIAITQNIVNIAVSLLLV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHH
YGLGMKIEGVAIGTLTAQYAGLVMAYLLWLRYYSTLRKRIEWHSFFDKQAMYRFFQVNRD
HCCCCEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
IFFRTICLVAVTVFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYAGEALAGRYIG
HHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANNQKALHTTVRQLFGWGVGLSLAFTLLYSIGGQSFLGLLTDETTVIHASESYFYWVLAI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHEEECCEEEEEECCCEEEEEEHH
PLAGFSAFLFDGIFIGATATHLMLKAMIVASVSFFLIYYGFRGTMGNHALWMAFITYLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RGVMQGVMGRNILGYKTSKKD
HHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure
MIQLNNGNKKILQIAIPSIVSNITVPLLGLIDVTIVGHLGSAAYIGAIAVGGMLFNIIYW
CEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IFGFLRMGTSGMTSQAYGRHDLNEVTRLLLRSVGVGLFIAFTLLALQYPIERTAFTFIQT
HHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TEEVEHLASLYFYICIWGAPAVLGLYSFAGWYIGMQNSRFPMYIAITQNIVNIAVSLLLV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHH
YGLGMKIEGVAIGTLTAQYAGLVMAYLLWLRYYSTLRKRIEWHSFFDKQAMYRFFQVNRD
HCCCCEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
IFFRTICLVAVTVFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYAGEALAGRYIG
HHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANNQKALHTTVRQLFGWGVGLSLAFTLLYSIGGQSFLGLLTDETTVIHASESYFYWVLAI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHEEECCEEEEEECCCEEEEEEHH
PLAGFSAFLFDGIFIGATATHLMLKAMIVASVSFFLIYYGFRGTMGNHALWMAFITYLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RGVMQGVMGRNILGYKTSKKD
HHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]