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The map label for this gene is frr [H]

Identifier: 150004420

GI number: 150004420

Start: 2437309

End: 2437869

Strand: Reverse

Name: frr [H]

Synonym: BVU_1867

Alternate gene names: 150004420

Gene position: 2437869-2437309 (Counterclockwise)

Preceding gene: 150004423

Following gene: 150004419

Centisome position: 47.22

GC content: 46.17

Gene sequence:

>561_bases
ATGATAGACGCAAAAACTTGCATCAACGACGCACAAGAGAAAATGGACATGGCCGTTATGTATTTGGAAGAAGCCTTAGC
GCACATTCGTGCAGGAAAAGCCAGTACCCGGTTGCTGGACGGCATTCGTGTTGACTCTTATGGAAGCATGGTTCCCATCA
GTAATGTAGCTGCCGTGACTACTCCCGATGCACGCAGTATCGCCATCAAGCCATGGGACAAAAGTATGTTCCGTATCATC
GAAAAAGCTATCATGGACTCTGATCTGGGCATCACTCCCGAAAACAACGGTGAAATTATCCGTTTGGGTATTCCGCCATT
GACAGAGGAACGCCGCAAGCAACTGGCCAAACAATGTAAAGGCGAAGGCGAAACCGCAAAAGTAAGTATACGCAACGCAC
GCCGTGACGCTATAGACACACTGAAAAAGGCCGTTAAAGAGGGTATGCCCGAAGACGAGCAAAAGAATGCGGAAGCCAAA
CTTCAGAAAGTACACGATAAATATATCGCGAAGATTGAAGAACTTCTAGCAGAGAAAGATAAAGAAATTATGACGGTTTA
A

Upstream 100 bases:

>100_bases
AAATATAAAATCATCTCTCTTTTATTGCAGATAATCAAAAAATAAATTACTTTTGTTTCACTTAAAACGAATCAATAAAC
AACTTAAATAACAGAACAGT

Downstream 100 bases:

>100_bases
TGAAGAACTTAAAATAATGAAGCAATAATAATGAAGAAGGAAGAATTGTCCTGCACAGCCTTGCTTTTGTCCGTGCGATC
CAATTCCTCTTTCTTCATTT

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIDAKTCINDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSIAIKPWDKSMFRII
EKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAKVSIRNARRDAIDTLKKAVKEGMPEDEQKNAEAK
LQKVHDKYIAKIEELLAEKDKEIMTV

Sequences:

>Translated_186_residues
MIDAKTCINDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSIAIKPWDKSMFRII
EKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAKVSIRNARRDAIDTLKKAVKEGMPEDEQKNAEAK
LQKVHDKYIAKIEELLAEKDKEIMTV
>Mature_186_residues
MIDAKTCINDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSIAIKPWDKSMFRII
EKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAKVSIRNARRDAIDTLKKAVKEGMPEDEQKNAEAK
LQKVHDKYIAKIEELLAEKDKEIMTV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=176, Percent_Identity=45.4545454545455, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 20737; Mature: 20737

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAKTCINDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEECCCCCCCCCCCEEEEE
TPDARSIAIKPWDKSMFRIIEKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCK
CCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC
GEGETAKVSIRNARRDAIDTLKKAVKEGMPEDEQKNAEAKLQKVHDKYIAKIEELLAEKD
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEIMTV
HHHCCC
>Mature Secondary Structure
MIDAKTCINDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEECCCCCCCCCCCEEEEE
TPDARSIAIKPWDKSMFRIIEKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCK
CCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC
GEGETAKVSIRNARRDAIDTLKKAVKEGMPEDEQKNAEAKLQKVHDKYIAKIEELLAEKD
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEIMTV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA