Click here to switch to the map view.

The map label for this gene is rsgA

Identifier: 150004419

GI number: 150004419

Start: 2436256

End: 2437188

Strand: Reverse

Name: rsgA

Synonym: BVU_1866

Alternate gene names: 150004419

Gene position: 2437188-2436256 (Counterclockwise)

Preceding gene: 150004420

Following gene: 150004418

Centisome position: 47.2

GC content: 43.09

Gene sequence:

>933_bases
ATGAAAGGACTAGTAATAAAAAACACAGGCAGCTGGTATCTTGTCAAAACAGAAGACGGACGTACCATCGAATGCAAGAT
CAAAGGAAATTTCCGTTTAAAGGGTATTCGGAGTACCAATCCCATTGCTGTAGGAGATTATGTACAAATCATTATCAACA
ATGAAGGAACCGCCTTCATCAGTGAGATAGAAGACCGCAAGAACTATATCATCCGGCGCGCCTCCAACCTTTCCAAACAA
TCGCACATACTGGCTGCCAATCTGGATCAATGTATGCTGATTGTTACAATTAATTATCCCGAAACCTCAACTATATTCAT
TGACCGTTTTCTAGCCACCGCGGAAGCATACCGTGTACCCGTCAAACTGATATTCAATAAGACAGACAGGTATAATGAGG
ATGATACACGCTATATGGATGCTCTGATAAACCTGTACACATACATCGGTTACCCTTGCTTCAAAGTTTCCGCACTGAAC
AACATAGGTACAGATGAAGTGAAAAAAGACCTGGAAGGGAAGGTCACTTTGCTTTCCGGCAACTCAGGAGTAGGGAAATC
AACATTAATCAACGCCATTTTACCTGAACAAACTTTGAAAACAGGTGAAATATCCGATTACCATAACAAGGGAATGCATA
CCACAACCTTTTCCGAAATGTTCCCGGTAGACGGCGGCGGATACATCATCGACACTCCGGGTATCAAAGGTTTCGGAACA
TTCGATATGGAAGAAGAGGAAGTAGGACATTACTTTAAAGAAATATTTGAATATTCCGCTCATTGCAAGTATGGAAACTG
CACCCACAGGCACGAGCCCGGATGCGCCGTACGCGATGCAGTGGAGAAACATCTAATCAGCGAGTCACGCTATACTTCTT
ACCTGAATATGTTGGAAGACAAGGAAGAAGGCAAGTATCGCGCCGCTTACTAA

Upstream 100 bases:

>100_bases
AGCAATAATAATGAAGAAGGAAGAATTGTCCTGCACAGCCTTGCTTTTGTCCGTGCGATCCAATTCCTCTTTCTTCATTT
TTCATTCTTCATTTTAATTT

Downstream 100 bases:

>100_bases
AAACCACAACTTTATGAAAAAACACCTCTTAGCTATTGCACTGTTTGCATTATGCACCACCGGGCTGAATGCCGCTTCTC
CTAAAAAAGTAGCTCCTGAA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKGLVIKNTGSWYLVKTEDGRTIECKIKGNFRLKGIRSTNPIAVGDYVQIIINNEGTAFISEIEDRKNYIIRRASNLSKQ
SHILAANLDQCMLIVTINYPETSTIFIDRFLATAEAYRVPVKLIFNKTDRYNEDDTRYMDALINLYTYIGYPCFKVSALN
NIGTDEVKKDLEGKVTLLSGNSGVGKSTLINAILPEQTLKTGEISDYHNKGMHTTTFSEMFPVDGGGYIIDTPGIKGFGT
FDMEEEEVGHYFKEIFEYSAHCKYGNCTHRHEPGCAVRDAVEKHLISESRYTSYLNMLEDKEEGKYRAAY

Sequences:

>Translated_310_residues
MKGLVIKNTGSWYLVKTEDGRTIECKIKGNFRLKGIRSTNPIAVGDYVQIIINNEGTAFISEIEDRKNYIIRRASNLSKQ
SHILAANLDQCMLIVTINYPETSTIFIDRFLATAEAYRVPVKLIFNKTDRYNEDDTRYMDALINLYTYIGYPCFKVSALN
NIGTDEVKKDLEGKVTLLSGNSGVGKSTLINAILPEQTLKTGEISDYHNKGMHTTTFSEMFPVDGGGYIIDTPGIKGFGT
FDMEEEEVGHYFKEIFEYSAHCKYGNCTHRHEPGCAVRDAVEKHLISESRYTSYLNMLEDKEEGKYRAAY
>Mature_310_residues
MKGLVIKNTGSWYLVKTEDGRTIECKIKGNFRLKGIRSTNPIAVGDYVQIIINNEGTAFISEIEDRKNYIIRRASNLSKQ
SHILAANLDQCMLIVTINYPETSTIFIDRFLATAEAYRVPVKLIFNKTDRYNEDDTRYMDALINLYTYIGYPCFKVSALN
NIGTDEVKKDLEGKVTLLSGNSGVGKSTLINAILPEQTLKTGEISDYHNKGMHTTTFSEMFPVDGGGYIIDTPGIKGFGT
FDMEEEEVGHYFKEIFEYSAHCKYGNCTHRHEPGCAVRDAVEKHLISESRYTSYLNMLEDKEEGKYRAAY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=316, Percent_Identity=31.3291139240506, Blast_Score=167, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_BACV8 (A6L1H7)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001299163.1
- ProteinModelPortal:   A6L1H7
- SMR:   A6L1H7
- STRING:   A6L1H7
- GeneID:   5302832
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_1866
- NMPDR:   fig|435590.6.peg.1757
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   FRDCKHL
- ProtClustDB:   PRK00098
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 35097; Mature: 35097

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLVIKNTGSWYLVKTEDGRTIECKIKGNFRLKGIRSTNPIAVGDYVQIIINNEGTAFI
CCCEEEECCCCEEEEECCCCCEEEEEEECCEEEEEECCCCCEEECCEEEEEECCCCCEEH
SEIEDRKNYIIRRASNLSKQSHILAANLDQCMLIVTINYPETSTIFIDRFLATAEAYRVP
HHHHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCE
VKLIFNKTDRYNEDDTRYMDALINLYTYIGYPCFKVSALNNIGTDEVKKDLEGKVTLLSG
EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHCCCCEEEEEEC
NSGVGKSTLINAILPEQTLKTGEISDYHNKGMHTTTFSEMFPVDGGGYIIDTPGIKGFGT
CCCCCHHHHHHHHCCHHHCCCCCCCHHHCCCCEEEEHHHHCCCCCCCEEEECCCCCCCCC
FDMEEEEVGHYFKEIFEYSAHCKYGNCTHRHEPGCAVRDAVEKHLISESRYTSYLNMLED
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
KEEGKYRAAY
CCCCCEECCC
>Mature Secondary Structure
MKGLVIKNTGSWYLVKTEDGRTIECKIKGNFRLKGIRSTNPIAVGDYVQIIINNEGTAFI
CCCEEEECCCCEEEEECCCCCEEEEEEECCEEEEEECCCCCEEECCEEEEEECCCCCEEH
SEIEDRKNYIIRRASNLSKQSHILAANLDQCMLIVTINYPETSTIFIDRFLATAEAYRVP
HHHHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCE
VKLIFNKTDRYNEDDTRYMDALINLYTYIGYPCFKVSALNNIGTDEVKKDLEGKVTLLSG
EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHCCCCEEEEEEC
NSGVGKSTLINAILPEQTLKTGEISDYHNKGMHTTTFSEMFPVDGGGYIIDTPGIKGFGT
CCCCCHHHHHHHHCCHHHCCCCCCCHHHCCCCEEEEHHHHCCCCCCCEEEECCCCCCCCC
FDMEEEEVGHYFKEIFEYSAHCKYGNCTHRHEPGCAVRDAVEKHLISESRYTSYLNMLED
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
KEEGKYRAAY
CCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA