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The map label for this gene is peh [H]

Identifier: 150004321

GI number: 150004321

Start: 2266143

End: 2267447

Strand: Reverse

Name: peh [H]

Synonym: BVU_1767

Alternate gene names: 150004321

Gene position: 2267447-2266143 (Counterclockwise)

Preceding gene: 150004322

Following gene: 150004317

Centisome position: 43.92

GC content: 42.07

Gene sequence:

>1305_bases
ATGAAATTAATAACTTTTGTATGTGCCGCCTTTCTATGCCTTCCGTCTTTGGCACAAGAAAAATTTCCGGACGGCACGCC
TGTATCCGATTGGTTTAAGGACAGTAAGATAGTAGATATAAACACATTAGGCAAGAAATACATTCTGACAGATTACGGTG
TCATCAATGACAGCACCCTGTTACAAACAGAGAAAATCCAATCTGCCATTGATGCTGCCGCACAAAATGGCGGCGGAGTT
ATCGTCATTCCCAAAGGAACCTATTTAAGCGGAGCGCTGTTCTTCAAACCCAAAACACACCTGCATCTGGAGGAAGGAGC
TGTGTTGAAGGGAAGTGATGATATCAGCAACTTCCCCATCATAGATACCCGCATGGAAGGGCAAAGCTTGAAATATTTCG
CGGCGTTGGTCAATGCCGACAAAGTGGACGGTTTTACGTTATCCGGAAAAGGCACGATTGATGGCAACGGATTAAGATAC
TGGAAATCATTCTGGCTTCGTCGAAAAGTCAATCCCCAATGTACCAATATGGATGAATTACGCCCTCGGCTGGTTCATAT
CTCCCATAGCAATAACGTCCAACTCTCAGGAGTACGCCTCATCAACTCTCCCTTTTGGACTACCCATCTTTATAAATGTA
ATCACATAAAATTACTGAACCTCTATATTTTCTCACCGGAGAAACCGGTAAAGGCTCCAAGTACGGATGCCATTGATATT
GATGTATGCAGCAATGTACTGGTGAAGAACTGCTATATGTCTGTCAATGATGACGCCATAGCCTTAAAAGGCGGCAAAGG
TCCCTGGGCAGACCAAGACCCGAACAATGGAGGTAACTTCAACATCATCATCGAAGATTGTACCTACGGCTTCTGCCACG
GCGCCCTCACTTGTGGAAGCGAATCCATCCACAATCGCAATATTATCTTGCGACGCATTCACATCACCAATGCCAATCGT
TTGTTATGGTTAAAGATGCGGCCGGACACCCCCCAACAATATGAATATATTCTGGTGGAAGATATCACCGGAGATGCAGA
TCATTTTCTGTATATCAAGCCTTGGACACAATTCTTCGACCTGAAAGATAGAAAAGACATTCCCGTTTCTTACTCAAACC
ATGTGACAATGAGAAACATTGATTTTAAATGCGATAATTTCTTCAGCGTAGAAAAGTCTGATCAATATCAACTTACTAAC
TTTACATTCGAAAACCTGAACATTAAAGCTAAAAACGGGGAATGCGACAAAGAAATGATTGACAATTTCATTTGGAAAAA
GGTAAGTATAAATAATATAAAATAA

Upstream 100 bases:

>100_bases
GTATCAAATCGGGGGATGAAGGGTTACATCTGAATTTGATGTTTGATTTCCGACAATAAACAAGTGAATAGTAGTTAGTG
ATTAATTTAATAGCAGAATC

Downstream 100 bases:

>100_bases
GATCAGCAGTTGAATAAATCAAATTCAACAATATCTAATCACGAGCCACGGCTGGCACTATCCAAACGTGGCTCCTGTTT
TTTCAACATGAAATTCACAA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKLITFVCAAFLCLPSLAQEKFPDGTPVSDWFKDSKIVDINTLGKKYILTDYGVINDSTLLQTEKIQSAIDAAAQNGGGV
IVIPKGTYLSGALFFKPKTHLHLEEGAVLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY
WKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNLYIFSPEKPVKAPSTDAIDI
DVCSNVLVKNCYMSVNDDAIALKGGKGPWADQDPNNGGNFNIIIEDCTYGFCHGALTCGSESIHNRNIILRRIHITNANR
LLWLKMRPDTPQQYEYILVEDITGDADHFLYIKPWTQFFDLKDRKDIPVSYSNHVTMRNIDFKCDNFFSVEKSDQYQLTN
FTFENLNIKAKNGECDKEMIDNFIWKKVSINNIK

Sequences:

>Translated_434_residues
MKLITFVCAAFLCLPSLAQEKFPDGTPVSDWFKDSKIVDINTLGKKYILTDYGVINDSTLLQTEKIQSAIDAAAQNGGGV
IVIPKGTYLSGALFFKPKTHLHLEEGAVLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY
WKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNLYIFSPEKPVKAPSTDAIDI
DVCSNVLVKNCYMSVNDDAIALKGGKGPWADQDPNNGGNFNIIIEDCTYGFCHGALTCGSESIHNRNIILRRIHITNANR
LLWLKMRPDTPQQYEYILVEDITGDADHFLYIKPWTQFFDLKDRKDIPVSYSNHVTMRNIDFKCDNFFSVEKSDQYQLTN
FTFENLNIKAKNGECDKEMIDNFIWKKVSINNIK
>Mature_434_residues
MKLITFVCAAFLCLPSLAQEKFPDGTPVSDWFKDSKIVDINTLGKKYILTDYGVINDSTLLQTEKIQSAIDAAAQNGGGV
IVIPKGTYLSGALFFKPKTHLHLEEGAVLKGSDDISNFPIIDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRY
WKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNLYIFSPEKPVKAPSTDAIDI
DVCSNVLVKNCYMSVNDDAIALKGGKGPWADQDPNNGGNFNIIIEDCTYGFCHGALTCGSESIHNRNIILRRIHITNANR
LLWLKMRPDTPQQYEYILVEDITGDADHFLYIKPWTQFFDLKDRKDIPVSYSNHVTMRNIDFKCDNFFSVEKSDQYQLTN
FTFENLNIKAKNGECDKEMIDNFIWKKVSINNIK

Specific function: Involved in maceration and soft-rotting of plant tissue [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 28 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 49159; Mature: 49159

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITFVCAAFLCLPSLAQEKFPDGTPVSDWFKDSKIVDINTLGKKYILTDYGVINDSTL
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCEEEEEECCEECCCCE
LQTEKIQSAIDAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEEGAVLKGSDDISNFPI
EHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCCE
IDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRYWKSFWLRRKVNPQCTNMDEL
EEEECCCCCCEEEEEECCCCCCCCEEECCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHC
RPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNLYIFSPEKPVKAPSTDAIDI
CCEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCCEEEH
DVCSNVLVKNCYMSVNDDAIALKGGKGPWADQDPNNGGNFNIIIEDCTYGFCHGALTCGS
HHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHCCEEECCC
ESIHNRNIILRRIHITNANRLLWLKMRPDTPQQYEYILVEDITGDADHFLYIKPWTQFFD
CCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCHHEEC
LKDRKDIPVSYSNHVTMRNIDFKCDNFFSVEKSDQYQLTNFTFENLNIKAKNGECDKEMI
CCCCCCCCEECCCEEEEEEECCCCCCEEECCCCCCEEEEEEEEECEEEEECCCCCCHHHH
DNFIWKKVSINNIK
HHHHEEEEEECCCC
>Mature Secondary Structure
MKLITFVCAAFLCLPSLAQEKFPDGTPVSDWFKDSKIVDINTLGKKYILTDYGVINDSTL
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCEEEEEECCEECCCCE
LQTEKIQSAIDAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEEGAVLKGSDDISNFPI
EHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCCE
IDTRMEGQSLKYFAALVNADKVDGFTLSGKGTIDGNGLRYWKSFWLRRKVNPQCTNMDEL
EEEECCCCCCEEEEEECCCCCCCCEEECCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHC
RPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLLNLYIFSPEKPVKAPSTDAIDI
CCEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCCEEEH
DVCSNVLVKNCYMSVNDDAIALKGGKGPWADQDPNNGGNFNIIIEDCTYGFCHGALTCGS
HHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHCCEEECCC
ESIHNRNIILRRIHITNANRLLWLKMRPDTPQQYEYILVEDITGDADHFLYIKPWTQFFD
CCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCHHEEC
LKDRKDIPVSYSNHVTMRNIDFKCDNFFSVEKSDQYQLTNFTFENLNIKAKNGECDKEMI
CCCCCCCCEECCCEEEEEEECCCCCCEEECCCCCCEEEEEEEEECEEEEECCCCCCHHHH
DNFIWKKVSINNIK
HHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2215211; 8074530; 8407675 [H]