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The map label for this gene is yloC [H]

Identifier: 150004204

GI number: 150004204

Start: 2127781

End: 2128677

Strand: Reverse

Name: yloC [H]

Synonym: BVU_1645

Alternate gene names: 150004204

Gene position: 2128677-2127781 (Counterclockwise)

Preceding gene: 150004212

Following gene: 150004203

Centisome position: 41.23

GC content: 41.03

Gene sequence:

>897_bases
TTGCAAAAAAACATATTAGTTATGATACAGTCAATGACCGGATACGGTAAAGCAACCGCTATATTCGGAGAAAAAAAAAT
TAACGTAGAGATCAAGTCTTTAAATAGTAAAGCAATGGACTTGTCTACACGGATCGCTCCTTTATACCGTGAAAAAGAAA
TGGAAATCCGCAATATGATTTCCAAATCATTGGAACGCGGTAAAGTTGATTTCAGCCTGTGGATAGAGAAAGACGTTTCG
GATACAGCCACTCCCATTAACGCCGCCCTTGTAGAAAACTACTACAATCAGATAAAATCTATTTCCGAAATGACCCATAT
ACCAATGCCCGAAGATTGGTTTGCAACCCTTCTACGAATGCCTGACGTACTGACCAAAGCCGATGTACAAGAACTTTCGG
AAGACGAATGGGAGGTAGTCCGCCGGGTAGTGGAAGAGGCCATCAACCATTTGGTAGATTTCCGCAAACAGGAAGGAACC
GCCTTGGAAAAGAAATTCAACGAAAAGATTGACAACATCGAGCGTTTGTTAAAGTCCATCGAACCCTACGAAACAGAGCG
TGTAGCCAAGATACGTGAACGCATTACAGATGCTTTGGAAAAGACCATCAGTGTGGATTATGATAAAAACCGCCTGGAGC
AAGAATTGATTTATTACATTGAAAAATTAGATATTAACGAAGAGAAACAACGACTGAGCAATCACTTGAGATATTTCCGT
GAAACCATGGCAGGCGGTCATGGACAAGGAAAAAAACTTGGTTTCATAGCACAGGAAATGGGACGCGAAATCAATACGAC
TGGCAGCAAATCCAATCATGCCGAAATGCAAAACATCGTAGTGCAGATGAAGGACGAACTGGAACAAATCAAAGAACAGG
TGTTAAATGTAATGTAA

Upstream 100 bases:

>100_bases
GTTTCAATATGCAAAATACACGACATAATGCTCTACTTATATAATATAATCTGCAAATATACACTTTTATTTATACTTCA
TTTCCATAAAAAGATTACTT

Downstream 100 bases:

>100_bases
CCGGTTCACATACCGGACACCATTCTCATAAGCAAAGAATCAAGATATGGCAACAGGAAAACTTATCATTTTTTCAGCCC
CCTCGGGTTCGGGCAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQKNILVMIQSMTGYGKATAIFGEKKINVEIKSLNSKAMDLSTRIAPLYREKEMEIRNMISKSLERGKVDFSLWIEKDVS
DTATPINAALVENYYNQIKSISEMTHIPMPEDWFATLLRMPDVLTKADVQELSEDEWEVVRRVVEEAINHLVDFRKQEGT
ALEKKFNEKIDNIERLLKSIEPYETERVAKIRERITDALEKTISVDYDKNRLEQELIYYIEKLDINEEKQRLSNHLRYFR
ETMAGGHGQGKKLGFIAQEMGREINTTGSKSNHAEMQNIVVQMKDELEQIKEQVLNVM

Sequences:

>Translated_298_residues
MQKNILVMIQSMTGYGKATAIFGEKKINVEIKSLNSKAMDLSTRIAPLYREKEMEIRNMISKSLERGKVDFSLWIEKDVS
DTATPINAALVENYYNQIKSISEMTHIPMPEDWFATLLRMPDVLTKADVQELSEDEWEVVRRVVEEAINHLVDFRKQEGT
ALEKKFNEKIDNIERLLKSIEPYETERVAKIRERITDALEKTISVDYDKNRLEQELIYYIEKLDINEEKQRLSNHLRYFR
ETMAGGHGQGKKLGFIAQEMGREINTTGSKSNHAEMQNIVVQMKDELEQIKEQVLNVM
>Mature_298_residues
MQKNILVMIQSMTGYGKATAIFGEKKINVEIKSLNSKAMDLSTRIAPLYREKEMEIRNMISKSLERGKVDFSLWIEKDVS
DTATPINAALVENYYNQIKSISEMTHIPMPEDWFATLLRMPDVLTKADVQELSEDEWEVVRRVVEEAINHLVDFRKQEGT
ALEKKFNEKIDNIERLLKSIEPYETERVAKIRERITDALEKTISVDYDKNRLEQELIYYIEKLDINEEKQRLSNHLRYFR
ETMAGGHGQGKKLGFIAQEMGREINTTGSKSNHAEMQNIVVQMKDELEQIKEQVLNVM

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=295, Percent_Identity=30.1694915254237, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34693; Mature: 34693

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNILVMIQSMTGYGKATAIFGEKKINVEIKSLNSKAMDLSTRIAPLYREKEMEIRNMI
CCCCCEEEEECCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
SKSLERGKVDFSLWIEKDVSDTATPINAALVENYYNQIKSISEMTHIPMPEDWFATLLRM
HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
PDVLTKADVQELSEDEWEVVRRVVEEAINHLVDFRKQEGTALEKKFNEKIDNIERLLKSI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
EPYETERVAKIRERITDALEKTISVDYDKNRLEQELIYYIEKLDINEEKQRLSNHLRYFR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ETMAGGHGQGKKLGFIAQEMGREINTTGSKSNHAEMQNIVVQMKDELEQIKEQVLNVM
HHHCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKNILVMIQSMTGYGKATAIFGEKKINVEIKSLNSKAMDLSTRIAPLYREKEMEIRNMI
CCCCCEEEEECCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
SKSLERGKVDFSLWIEKDVSDTATPINAALVENYYNQIKSISEMTHIPMPEDWFATLLRM
HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
PDVLTKADVQELSEDEWEVVRRVVEEAINHLVDFRKQEGTALEKKFNEKIDNIERLLKSI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
EPYETERVAKIRERITDALEKTISVDYDKNRLEQELIYYIEKLDINEEKQRLSNHLRYFR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ETMAGGHGQGKKLGFIAQEMGREINTTGSKSNHAEMQNIVVQMKDELEQIKEQVLNVM
HHHCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]