| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is gmk [H]
Identifier: 150004203
GI number: 150004203
Start: 2127165
End: 2127734
Strand: Reverse
Name: gmk [H]
Synonym: BVU_1644
Alternate gene names: 150004203
Gene position: 2127734-2127165 (Counterclockwise)
Preceding gene: 150004204
Following gene: 150004202
Centisome position: 41.21
GC content: 43.33
Gene sequence:
>570_bases ATGGCAACAGGAAAACTTATCATTTTTTCAGCCCCCTCGGGTTCGGGCAAATCAACCATTATCAACTATCTGTTGACACA AAACCTGAACCTGTCTTTCTCTATTTCTGCCACCAGCCGCCCTCCTCGCGGAAAAGAACGGCATGGTGTGGAATATTTCT TCCTATCTCCTGAGGAATTCAGACAACGCATTGCCAATAATGAGTTTCTGGAATACGAAGAAGTATACGAAAACCGTTTC TACGGAACCTTGAAAGCACAAGTGGAAAAACAATTGGAAGCCGGACAAAATGTGATTTTTGACGTAGATGTGGTAGGCGG ATGTAATATCAAAAAATATTATGGCAGCCGCGCATTGTCTGTTTTCATTCAACCACCCAGTGTAGAAGAACTCCGTAAAC GCCTGCAAGGCCGTGGTACTGATGCCCCCGAAGTGATTGAAAGCCGAATCGCAAAAGCAGAATTCGAATTGGGGTTCGCC GATAAATTCGATACCGTGATAGTAAATGACGATTTGGAGAAGGCAAAGGCGGAAGCACTGAAAGTTATTAGAAACTTTAT TGAACAATAA
Upstream 100 bases:
>100_bases CAGATGAAGGACGAACTGGAACAAATCAAAGAACAGGTGTTAAATGTAATGTAACCGGTTCACATACCGGACACCATTCT CATAAGCAAAGAATCAAGAT
Downstream 100 bases:
>100_bases GACGATGATCAAAGATCCGAAAAAACTGGCCCAAAGAATGTCGATACTTTGTATCCTCATTGGTTTTATAGCTTTGGCTG TAGGCATCATTGCAATGGCA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEFRQRIANNEFLEYEEVYENRF YGTLKAQVEKQLEAGQNVIFDVDVVGGCNIKKYYGSRALSVFIQPPSVEELRKRLQGRGTDAPEVIESRIAKAEFELGFA DKFDTVIVNDDLEKAKAEALKVIRNFIEQ
Sequences:
>Translated_189_residues MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEFRQRIANNEFLEYEEVYENRF YGTLKAQVEKQLEAGQNVIFDVDVVGGCNIKKYYGSRALSVFIQPPSVEELRKRLQGRGTDAPEVIESRIAKAEFELGFA DKFDTVIVNDDLEKAKAEALKVIRNFIEQ >Mature_188_residues ATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEFRQRIANNEFLEYEEVYENRFY GTLKAQVEKQLEAGQNVIFDVDVVGGCNIKKYYGSRALSVFIQPPSVEELRKRLQGRGTDAPEVIESRIAKAEFELGFAD KFDTVIVNDDLEKAKAEALKVIRNFIEQ
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=182, Percent_Identity=35.1648351648352, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI4504221, Length=182, Percent_Identity=35.1648351648352, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI226874831, Length=182, Percent_Identity=35.1648351648352, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI38570142, Length=188, Percent_Identity=29.7872340425532, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI186700627, Length=178, Percent_Identity=28.6516853932584, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI186700629, Length=178, Percent_Identity=28.6516853932584, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI186972120, Length=178, Percent_Identity=28.6516853932584, Blast_Score=68, Evalue=4e-12, Organism=Homo sapiens, GI111154074, Length=165, Percent_Identity=29.6969696969697, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI262118263, Length=186, Percent_Identity=30.1075268817204, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI262118259, Length=189, Percent_Identity=30.6878306878307, Blast_Score=64, Evalue=7e-11, Organism=Homo sapiens, GI4505237, Length=186, Percent_Identity=30.1075268817204, Blast_Score=64, Evalue=7e-11, Organism=Homo sapiens, GI262118255, Length=186, Percent_Identity=30.1075268817204, Blast_Score=64, Evalue=7e-11, Organism=Escherichia coli, GI1790080, Length=186, Percent_Identity=44.0860215053763, Blast_Score=146, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17508835, Length=188, Percent_Identity=37.7659574468085, Blast_Score=119, Evalue=6e-28, Organism=Caenorhabditis elegans, GI193203132, Length=188, Percent_Identity=37.7659574468085, Blast_Score=119, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6320662, Length=184, Percent_Identity=41.304347826087, Blast_Score=139, Evalue=3e-34, Organism=Drosophila melanogaster, GI21356141, Length=187, Percent_Identity=36.8983957219251, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI161077626, Length=187, Percent_Identity=26.2032085561497, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45554489, Length=187, Percent_Identity=26.2032085561497, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640542, Length=187, Percent_Identity=26.2032085561497, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007136, Length=187, Percent_Identity=26.2032085561497, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI45554481, Length=187, Percent_Identity=26.2032085561497, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI85724806, Length=187, Percent_Identity=26.2032085561497, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21366; Mature: 21235
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF CCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEECHHHH RQRIANNEFLEYEEVYENRFYGTLKAQVEKQLEAGQNVIFDVDVVGGCNIKKYYGSRALS HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCEEEE VFIQPPSVEELRKRLQGRGTDAPEVIESRIAKAEFELGFADKFDTVIVNDDLEKAKAEAL EEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH KVIRNFIEQ HHHHHHHCC >Mature Secondary Structure ATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEECHHHH RQRIANNEFLEYEEVYENRFYGTLKAQVEKQLEAGQNVIFDVDVVGGCNIKKYYGSRALS HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCEEEE VFIQPPSVEELRKRLQGRGTDAPEVIESRIAKAEFELGFADKFDTVIVNDDLEKAKAEAL EEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH KVIRNFIEQ HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]