| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003976
Identifier: 150003976
GI number: 150003976
Start: 1884575
End: 1886383
Strand: Direct
Name: 150003976
Synonym: BVU_1410
Alternate gene names: NA
Gene position: 1884575-1886383 (Clockwise)
Preceding gene: 150003975
Following gene: 150003977
Centisome position: 36.5
GC content: 41.07
Gene sequence:
>1809_bases ATGAATAGAAGATTGAAATATGTGCCCATGCTATGTGTATGTCTGATAGGCATGCTTGTTTCATGCGGTACGGTGAAGAG AGCTTCCGGCTTGTCCGGAAATAAAGCTGTTGTGGAGGAAAAGGATCCGCTTACTCCGGAGCAGCGCCGTAAATACGACT ATTTCTTTTTGGAAGCGCTTCGGATGAAGGAAAAAGGTGACTTGGATGCGGCTTTCGAAATGTATAGTCACTGTTTGGAC ATTTATCCGCAAGGAGCCGCTACTTTGTTCGAAATTTCCCGCTTCCATATGTTTCTCAATCAGCCGGAAAAAGGGGAGGA AGCTTTGAAGAAGGCAGTGGATGCCGATCCTAAGAGCTTTTGGTATAAGCAAACTTTGGCAGCCTATTATCAAGGTAAGG GAAATTACCCGAAAGCCATTTATGTTTATGAGGATATGGCGAGCCAGTTCCCCTCACGTCTGGAACCGTTGATGGCTTTG ATTGATCTCTATACCCGTACCAAGGACTATCAGCAGGTAGTTAATACATTGAACCGCCTTGAAGCCTTGGATGGGAAGTC TGAACAAATCAGCATGGAGAAATTCCGTATGTATCTGGCCATGAACAATGACCAGCAGGCATTTACGGAGATTGAGAATT TGGCAAAAGAATATCCATATGACATGCGTTATCTTACCATTTTGGGAGATGTCTATCTGAACAACGGTAAGGAAGAAGAA GCATACGAAACTTATCAGAAAGTATTGAAGGAAGAACCGGGCTATGCGCCGGCGTTGCTTTCCATGGCTTCTTATTACGA GAAAAAAGGGCAGGATAGTTTGTATCAGGTACAGTTGGATACTATTTTGCTGAATGATAATGTGGATAGCGATACAAAGA TGAACATTATGCGCCAGCTTATTCTGCGTTCCGAGCAAACGAACAAGGACAGTACGAAAATAGCAGGCCTGTTTACTTCT ATATTGAAGGAAAAACAAGAGAATGCAGATATTGCTATGTTGGCGGCCCAATATCTTCTGACGAAAAAGATGGATAAAGA GGCAACCCCTGTTTTGCACCAAGTGCTTGAAATTGATCCGGAAAATACGCCGGCACGCTTGCAGCTATTGAGTTTTGCCA TTCGTGAGCAGAATATGGATGAAGTAATCAAATTGTGTGCTCCTGCTTTAGAATATACTCCGGATGTATTGGAATTCTAT TATTATATGGGATTGGCCTATCATCAGAAAGAGAAAACAGACGAGGCATTGGAGGTTTTTAAAAAAGGAGTGAATCAAGT AACAGATAAAAGCAATAAGGATATCGTTTCTGATTTCTATGCCATTATGGGGGATCTTTATCATATAAAGAAGATGAATG TGGAGGCATATGCCGCATACGATTCCGCTTTGGTTTATAAGGAAAACAATATAGGGGCCTTGAATAATTATGCCTATTAC CTGTCTGTAGAGCGTAAAAACCTGGATAAAGCGGAAGAAATGAGTTATCGTACCGTAAAGGCCGAACCTACCAATGGTAC GTATCTGGATACCTATGCCTGGATACTTTTTGAGAAAGGTAAATATGTAGAAGCAAAAATTTACATTGACCAGGCTATGC AGAATGATGGAAGTAAAAGTTCCGTTGTTGTAGAGCATTGTGGAGATATTTACTATATGAATGGAGATCGTGAAAAGGCT TTGGAATATTGGCAACAAGCGGAAAAATTATCCAAGGAGCCTCCTCAAGAAGGTAGTGAAGAACGTAGTGAAAAGGAATT GAACTTATTGAGAAAGAAAATTGTACAAAAGAAATACTTTGCAGAATGA
Upstream 100 bases:
>100_bases CCGTCACGAACATGCCGAATGGCAGGAAGTGGAGGTGCTGGACGAAACGGAACGTGGTGCAGGTGGCTTTGGACATACCG GAAAAAAGTAAAAGGAAACA
Downstream 100 bases:
>100_bases TGAAACGTGTCTGTTTTTATTTGTTTAGCGCTTTGCTGATTATATTTATTTCTTCATGTTCATCTACCCGGAGTATGAAG AAAGGGGTATCTATTGGCAA
Product: TPR domain-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLD IYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMAL IDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQLILRSEQTNKDSTKIAGLFTS ILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDPENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFY YYMGLAYHQKEKTDEALEVFKKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKSSVVVEHCGDIYYMNGDREKA LEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYFAE
Sequences:
>Translated_602_residues MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLD IYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMAL IDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQLILRSEQTNKDSTKIAGLFTS ILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDPENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFY YYMGLAYHQKEKTDEALEVFKKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKSSVVVEHCGDIYYMNGDREKA LEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYFAE >Mature_602_residues MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLD IYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMAL IDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQLILRSEQTNKDSTKIAGLFTS ILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDPENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFY YYMGLAYHQKEKTDEALEVFKKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKSSVVVEHCGDIYYMNGDREKA LEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYFAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69688; Mature: 69688
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEAL CCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH RMKEKGDLDAAFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSF HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH WYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRL HHHHHHHHHHCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE HHCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCCCCCHH AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQL HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHH ILRSEQTNKDSTKIAGLFTSILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDP HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC ENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFYYYMGLAYHQKEKTDEALEVF CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH KKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCEEEE LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKS EEEECCCCCHHHHCCCEEEEECCCCCCEEHHEEEEEEECCCEEEEEEEEEHHHCCCCCCC SVVVEHCGDIYYMNGDREKALEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYF CCHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AE CC >Mature Secondary Structure MNRRLKYVPMLCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEAL CCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH RMKEKGDLDAAFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSF HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH WYKQTLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRL HHHHHHHHHHCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EALDGKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEE HHCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCCCCCHH AYETYQKVLKEEPGYAPALLSMASYYEKKGQDSLYQVQLDTILLNDNVDSDTKMNIMRQL HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHH ILRSEQTNKDSTKIAGLFTSILKEKQENADIAMLAAQYLLTKKMDKEATPVLHQVLEIDP HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC ENTPARLQLLSFAIREQNMDEVIKLCAPALEYTPDVLEFYYYMGLAYHQKEKTDEALEVF CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHH KKGVNQVTDKSNKDIVSDFYAIMGDLYHIKKMNVEAYAAYDSALVYKENNIGALNNYAYY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCEEEE LSVERKNLDKAEEMSYRTVKAEPTNGTYLDTYAWILFEKGKYVEAKIYIDQAMQNDGSKS EEEECCCCCHHHHCCCEEEEECCCCCCEEHHEEEEEEECCCEEEEEEEEEHHHCCCCCCC SVVVEHCGDIYYMNGDREKALEYWQQAEKLSKEPPQEGSEERSEKELNLLRKKIVQKKYF CCHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA