| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yvdE [H]
Identifier: 150003885
GI number: 150003885
Start: 1766430
End: 1768187
Strand: Reverse
Name: yvdE [H]
Synonym: BVU_1318
Alternate gene names: 150003885
Gene position: 1768187-1766430 (Counterclockwise)
Preceding gene: 150003888
Following gene: 150003884
Centisome position: 34.25
GC content: 48.29
Gene sequence:
>1758_bases ATGAAAACGTTTCAAACATTTGACATTTCAGCCGAGTACGATGCCATACACCGCACCTTTCCCTGCCACAAAGATGCTCC AGTCATAGGGCTTACCGGAAACTTCCAGGAAGGCGCATGTACTTTGCTGGAAGGATATTTCACTTCCATTCTGAAAGCAG GAGGTATTCCTTTCATTATTCCTCCTGTTGACGAAACTAACAGTTTGATAAACTCACTGAATGCATTGGATGGCTTGCTA CTGACCGGCGGTGCGGATATCAATCCCTTGTTCCTTGGAGAAGAACCGATAAAGGAATTACACAGCATAAATCCCCGGAG GGATCGTCAGGAGTTATTGCTTGCCAAACTGGCCGCCGACCGGCAGATACCGATTCTGGGAATATGCCGCGGCATACAGG TGATGAACGCCGCTTTTGGAGGCAGCCTGTATCAGGATATCCACGTACAGATGGAAGGGGAACGGATCAAACACGATCAG GATTTGGGACGGGGATATGCCTCGCATACGGTCCGGATAGAGAAAGATTCCTTACTCTATAAATTGTTTGAAACAGAAAT ATTGCCGGTCAATTCGTTTCACCATCAGGCGGTAAAGGAGGTTGCGCCGGGTTTCAGGGTAACTGCCCGCTCATCCGACG GAGTCATTGAAGCGATGGAATCTACCGAATGCAAGTCCATGATGGGAGTGCAATGGCATCCGGAATGTTTCATTCTGGAA AACAATACCTGTATGATGCCGGTATTCCACTGGCTTATACAGGAATCCACTTCTTTCAGAGAAGCCAAAAAACTTCACAA CCGCATGATAACGCTGGATTCACATTGCGACACTCCCATGTTCTTCGATCAAGGAATAAACTTCGCCACCCGTGACAAGA AAATCCTGGTAGACCTGCATAAGATGACGGAAGGACATCTGGACGCAACCATCATGGTGGCTTACCTGAAGCAATTGGAA CGTACCGATGAAGCCTTATCGGCCGCTACTGCCAAAGCAGACCGCATCCTGAACGAAATAGAGGAGATGGTTGCCAAGAA CTGTACAGCCGTAGATATAGCATATACTCCCGCTGATCTGTGCCGTTTGAAAAAAGCAGGGAAAAAGGCTGTCATGCTGG GCATTGAAAACGGATATGCCATTGGCAAGGATATCACGAATGTAGAACGTTTCCGCCATCGTGGCGTGGTGTACATGACA CTTTGCCACAACGGAAATAATGATATCTGCGGCTCTGCCCGTTATAATGAGGAAGGACTGGGCGTAAGCACATTCGGTGA ACAGGTGATAAAAGAAATGAACCGTGTGGGAATGATGGTAGATGTTTCTCATGCCGGAGAGAAAAGTTTCTATGATGCAC TGGCAATCAGCGGCAAACCGATCGTAGCCTCTCATTCTTCGGCCCGTGCCCTTTGCGACCATCCGCGCAATCTGACGGAT GACCAATTGAAAGCATTGGCAGCCAAGGGGGGGGTGGCACAGGTATGTATGTATGGCGGATTCCTGCGCAAGAACGGAGA AGCTACCATCAAGGATGCCATCGAGCATCTGAACCACATGGTAAATGTCATGGGCATAGAACATGTAGGGATAGGAACCG ATTTTGACGGTGACGGCGGCATCACAGGCTGCGCTTCGGCATCAGAATTGATAAACTTTACACGCCGGCTGCTGTTGGAA AGATACAGTGAAGAAAATATCCGCCTCATTTGGGGTGGAAACTTCCTGCGCGTTATGGAAGAAGTACAAAGAAAATAA
Upstream 100 bases:
>100_bases GTCTTGTATAGGTTCCATGGTCATTAGATTTTTAGCAAATATGAAAAATAAATCTGAATTTATCCCTATCTTTGCTTAGT TTCTACGAATAATTTAACTT
Downstream 100 bases:
>100_bases CGTAACTTTGCGGCGCAGCCCCCTTCCATATAAAGGATAATGCACAAATAAATAACAGAAGAATAAGTATGAAGATAAGA AATGTTTTAGTAATCCCGTT
Product: glutamine amidotransferase, class II/dipeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFIIPPVDETNSLINSLNALDGLL LTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAADRQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQ DLGRGYASHTVRIEKDSLLYKLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLHKMTEGHLDATIMVAYLKQLE RTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADLCRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMT LCHNGNNDICGSARYNEEGLGVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGGITGCASASELINFTRRLLLE RYSEENIRLIWGGNFLRVMEEVQRK
Sequences:
>Translated_585_residues MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFIIPPVDETNSLINSLNALDGLL LTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAADRQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQ DLGRGYASHTVRIEKDSLLYKLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLHKMTEGHLDATIMVAYLKQLE RTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADLCRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMT LCHNGNNDICGSARYNEEGLGVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGGITGCASASELINFTRRLLLE RYSEENIRLIWGGNFLRVMEEVQRK >Mature_585_residues MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFIIPPVDETNSLINSLNALDGLL LTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAADRQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQ DLGRGYASHTVRIEKDSLLYKLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLHKMTEGHLDATIMVAYLKQLE RTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADLCRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMT LCHNGNNDICGSARYNEEGLGVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGGITGCASASELINFTRRLLLE RYSEENIRLIWGGNFLRVMEEVQRK
Specific function: Unknown
COG id: COG2071
COG function: function code R; Predicted glutamine amidotransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=341, Percent_Identity=29.6187683284457, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI193211608, Length=337, Percent_Identity=28.1899109792285, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI193211610, Length=337, Percent_Identity=28.1899109792285, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI189458885, Length=339, Percent_Identity=25.3687315634218, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI4758190, Length=339, Percent_Identity=25.3687315634218, Blast_Score=124, Evalue=3e-28, Organism=Escherichia coli, GI87081871, Length=204, Percent_Identity=38.7254901960784, Blast_Score=116, Evalue=4e-27, Organism=Drosophila melanogaster, GI281362638, Length=295, Percent_Identity=34.2372881355932, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI281362636, Length=295, Percent_Identity=34.2372881355932, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI221475880, Length=353, Percent_Identity=30.5949008498584, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI161083233, Length=303, Percent_Identity=29.042904290429, Blast_Score=150, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR011697 [H]
Pfam domain/function: PF07722 Peptidase_C26 [H]
EC number: NA
Molecular weight: Translated: 64910; Mature: 64910
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFII CCCCEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE PPVDETNSLINSLNALDGLLLTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAAD CCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCC RQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQDLGRGYASHTVRIEKDSLLY CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHCCHHHHCCCCCCCEEEEEHHHHHH KLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE HHHHHHEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEECCEEEEEE NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLH CCEEHHHHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCCHHHCCCCCCCCCCCCEEEHH KMTEGHLDATIMVAYLKQLERTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH CRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMTLCHNGNNDICGSARYNEEGL HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC GVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD CHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHEECCCCEEECCCCHHHHHCCCCCCCH DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGG HHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCC ITGCASASELINFTRRLLLERYSEENIRLIWGGNFLRVMEEVQRK CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC >Mature Secondary Structure MKTFQTFDISAEYDAIHRTFPCHKDAPVIGLTGNFQEGACTLLEGYFTSILKAGGIPFII CCCCEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE PPVDETNSLINSLNALDGLLLTGGADINPLFLGEEPIKELHSINPRRDRQELLLAKLAAD CCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCC RQIPILGICRGIQVMNAAFGGSLYQDIHVQMEGERIKHDQDLGRGYASHTVRIEKDSLLY CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHCCHHHHCCCCCCCEEEEEHHHHHH KLFETEILPVNSFHHQAVKEVAPGFRVTARSSDGVIEAMESTECKSMMGVQWHPECFILE HHHHHHEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEECCEEEEEE NNTCMMPVFHWLIQESTSFREAKKLHNRMITLDSHCDTPMFFDQGINFATRDKKILVDLH CCEEHHHHHHHHHHCCCHHHHHHHHHHCEEEECCCCCCCCHHHCCCCCCCCCCCCEEEHH KMTEGHLDATIMVAYLKQLERTDEALSAATAKADRILNEIEEMVAKNCTAVDIAYTPADL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH CRLKKAGKKAVMLGIENGYAIGKDITNVERFRHRGVVYMTLCHNGNNDICGSARYNEEGL HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC GVSTFGEQVIKEMNRVGMMVDVSHAGEKSFYDALAISGKPIVASHSSARALCDHPRNLTD CHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHEECCCCEEECCCCHHHHHCCCCCCCH DQLKALAAKGGVAQVCMYGGFLRKNGEATIKDAIEHLNHMVNVMGIEHVGIGTDFDGDGG HHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCC ITGCASASELINFTRRLLLERYSEENIRLIWGGNFLRVMEEVQRK CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]