| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150003859
Identifier: 150003859
GI number: 150003859
Start: 1739500
End: 1740864
Strand: Direct
Name: 150003859
Synonym: BVU_1291
Alternate gene names: NA
Gene position: 1739500-1740864 (Clockwise)
Preceding gene: 150003858
Following gene: 150003860
Centisome position: 33.69
GC content: 39.41
Gene sequence:
>1365_bases ATGAGTGACCTGAAGAATGATTTGAAGAATGTGCCTTATATAAAGCAGTTCTTTGGTGAATATCTTGATTTGCGCAAGGA TAAGGATAATGAAGCCTTGATTGTAGAAAGTATTCGTAACGGTGTTGAGTTCAAAGGAACTAATTTGTGGATTCTTATAT TCGCAATTTTTATTGCTTCATTGGGCTTGAATGTGAATTCTACGGCAGTGATTATCGGTGCTATGTTGATATCTCCGCTG ATGGGGCCGATTATGGGAGTGGGGCTGGCTATCGGACAGAATGATTTTGAACTGTTGAAACGTTCTCTGAAAAGTTATTT GGTGGCGACTGTATTTAGTGTGATTACATCCACGATTTATTTTTCGCTGACTCCGTTGGATGAAGTGCAATCGGAGTTGC TGGCACGTACTTCTCCTACTATATATGATGTGCTTATAGCTTTATGCGGTGGCTTGGCCGGTATTATCGCCTTGTCTACA AAGGAGAAGGGGAATGTTATTCCGGGGGTAGCTATTGCTACGGCTTTGATGCCGCCTTTGTGTACTGCCGGATTCGGGCT TGCTACCGGAAATTTACTTTATTTTTTAGGTGCGTTCTATTTGTATTTTATCAATTCAGTATTTATCAGTCTGGCTACTT TTATCGGGGTGCGTGTCATGCATTTCCAACGTAAGGAGTTTGTGGATAAGGAGCGTGAGAAATTGGTAAAGAAATATATT ATTTTTATTACTTTGGCTACGATGTGTCCTGCTGTTTATCTGACTTATGGCATTGTAAAAAGTACTATTTATGAAGCTTC TGCCAACAACTTTATCAACGAGGAGCTGAATTTTAATAATACCCAAGTAATAGACCGGAAGATTTCTTTCGAGAAGAAGG AAATACGTGTTGTGCTAATAGGCAATGAGGTTTCGGAAACAGAAATAGCAACCGCAAGGGATAACTTGAAACTTTTTAAT CTGGCAGGAACCAAACTGGTTGTTCTTCAAGGAATGAATAATGATGCGATGGATATTGGCAGTATAAAGGCGCAAGTGAT GGAGGACTTTTATAAGAATAGTGAGAAACGTTTGCTGGAGCAGCAGGAAAAGATTAAGTCTTTGGAAAACGAACTTAATG TATATGCCGCATACAATACCGTAGATAAAAAGATAATTCCCGAACTTAAAGTACTTTATCCTGCAGCAGAAGCTATAGCC ATGGCGAAGACTGTGGAATTGCAGGTAGACTCAACCCAAACGGACACATTGACAATAGTCTTGATGAAATTCAGTAAAAA ACCTGTAGGAAAAGAACAGGAAAAGATTTCCGAATGGTTGAAGGCACGTGTCGGGGCGAAAAAACTTAAATTAATTGTAG AGTAA
Upstream 100 bases:
>100_bases TTCGTACATTACTGTTGTTATTGTTTGTGGCATATATTGTGAAAACGGACTTCCCCTTGCAGCAGATACCTGTTATAAAC CGATACATAAAGAAATAGCT
Downstream 100 bases:
>100_bases AACCATGAAAAAACTACTATTGCTGCTGTCTTTCCTGCCTTTATGTATATGGGGTAATGAGGGAATGTGGCTTCCTTGTT GCCTTAGCAAACAAACTCAA
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSDLKNDLKNVPYIKQFFGEYLDLRKDKDNEALIVESIRNGVEFKGTNLWILIFAIFIASLGLNVNSTAVIIGAMLISPL MGPIMGVGLAIGQNDFELLKRSLKSYLVATVFSVITSTIYFSLTPLDEVQSELLARTSPTIYDVLIALCGGLAGIIALST KEKGNVIPGVAIATALMPPLCTAGFGLATGNLLYFLGAFYLYFINSVFISLATFIGVRVMHFQRKEFVDKEREKLVKKYI IFITLATMCPAVYLTYGIVKSTIYEASANNFINEELNFNNTQVIDRKISFEKKEIRVVLIGNEVSETEIATARDNLKLFN LAGTKLVVLQGMNNDAMDIGSIKAQVMEDFYKNSEKRLLEQQEKIKSLENELNVYAAYNTVDKKIIPELKVLYPAAEAIA MAKTVELQVDSTQTDTLTIVLMKFSKKPVGKEQEKISEWLKARVGAKKLKLIVE
Sequences:
>Translated_454_residues MSDLKNDLKNVPYIKQFFGEYLDLRKDKDNEALIVESIRNGVEFKGTNLWILIFAIFIASLGLNVNSTAVIIGAMLISPL MGPIMGVGLAIGQNDFELLKRSLKSYLVATVFSVITSTIYFSLTPLDEVQSELLARTSPTIYDVLIALCGGLAGIIALST KEKGNVIPGVAIATALMPPLCTAGFGLATGNLLYFLGAFYLYFINSVFISLATFIGVRVMHFQRKEFVDKEREKLVKKYI IFITLATMCPAVYLTYGIVKSTIYEASANNFINEELNFNNTQVIDRKISFEKKEIRVVLIGNEVSETEIATARDNLKLFN LAGTKLVVLQGMNNDAMDIGSIKAQVMEDFYKNSEKRLLEQQEKIKSLENELNVYAAYNTVDKKIIPELKVLYPAAEAIA MAKTVELQVDSTQTDTLTIVLMKFSKKPVGKEQEKISEWLKARVGAKKLKLIVE >Mature_453_residues SDLKNDLKNVPYIKQFFGEYLDLRKDKDNEALIVESIRNGVEFKGTNLWILIFAIFIASLGLNVNSTAVIIGAMLISPLM GPIMGVGLAIGQNDFELLKRSLKSYLVATVFSVITSTIYFSLTPLDEVQSELLARTSPTIYDVLIALCGGLAGIIALSTK EKGNVIPGVAIATALMPPLCTAGFGLATGNLLYFLGAFYLYFINSVFISLATFIGVRVMHFQRKEFVDKEREKLVKKYII FITLATMCPAVYLTYGIVKSTIYEASANNFINEELNFNNTQVIDRKISFEKKEIRVVLIGNEVSETEIATARDNLKLFNL AGTKLVVLQGMNNDAMDIGSIKAQVMEDFYKNSEKRLLEQQEKIKSLENELNVYAAYNTVDKKIIPELKVLYPAAEAIAM AKTVELQVDSTQTDTLTIVLMKFSKKPVGKEQEKISEWLKARVGAKKLKLIVE
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 50533; Mature: 50402
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLKNDLKNVPYIKQFFGEYLDLRKDKDNEALIVESIRNGVEFKGTNLWILIFAIFIAS CCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCEECCCCHHHHHHHHHHHH LGLNVNSTAVIIGAMLISPLMGPIMGVGLAIGQNDFELLKRSLKSYLVATVFSVITSTIY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSLTPLDEVQSELLARTSPTIYDVLIALCGGLAGIIALSTKEKGNVIPGVAIATALMPPL EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH CTAGFGLATGNLLYFLGAFYLYFINSVFISLATFIGVRVMHFQRKEFVDKEREKLVKKYI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFITLATMCPAVYLTYGIVKSTIYEASANNFINEELNFNNTQVIDRKISFEKKEIRVVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHCCCCEEEEEEEE GNEVSETEIATARDNLKLFNLAGTKLVVLQGMNNDAMDIGSIKAQVMEDFYKNSEKRLLE CCCCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHH QQEKIKSLENELNVYAAYNTVDKKIIPELKVLYPAAEAIAMAKTVELQVDSTQTDTLTIV HHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEE LMKFSKKPVGKEQEKISEWLKARVGAKKLKLIVE EEECCCCCCCCHHHHHHHHHHHHHCHHHHHEECC >Mature Secondary Structure SDLKNDLKNVPYIKQFFGEYLDLRKDKDNEALIVESIRNGVEFKGTNLWILIFAIFIAS CCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCEECCCCHHHHHHHHHHHH LGLNVNSTAVIIGAMLISPLMGPIMGVGLAIGQNDFELLKRSLKSYLVATVFSVITSTIY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSLTPLDEVQSELLARTSPTIYDVLIALCGGLAGIIALSTKEKGNVIPGVAIATALMPPL EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH CTAGFGLATGNLLYFLGAFYLYFINSVFISLATFIGVRVMHFQRKEFVDKEREKLVKKYI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFITLATMCPAVYLTYGIVKSTIYEASANNFINEELNFNNTQVIDRKISFEKKEIRVVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHCCCCEEEEEEEE GNEVSETEIATARDNLKLFNLAGTKLVVLQGMNNDAMDIGSIKAQVMEDFYKNSEKRLLE CCCCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHH QQEKIKSLENELNVYAAYNTVDKKIIPELKVLYPAAEAIAMAKTVELQVDSTQTDTLTIV HHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEE LMKFSKKPVGKEQEKISEWLKARVGAKKLKLIVE EEECCCCCCCCHHHHHHHHHHHHHCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]