| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150003858
Identifier: 150003858
GI number: 150003858
Start: 1738052
End: 1739497
Strand: Direct
Name: 150003858
Synonym: BVU_1290
Alternate gene names: NA
Gene position: 1738052-1739497 (Clockwise)
Preceding gene: 150003857
Following gene: 150003859
Centisome position: 33.66
GC content: 40.39
Gene sequence:
>1446_bases ATGGCAGGATTAAAAGCATTAGCCAAGGAAACAGCCATATATGGGATGAGTAGTATCATCGGGCGGTTCCTGAATTATTT GTTAGTACCGATATATACCAACGCTTTGCCTGTGGAATCGGGGGGCTATGGTATCATTACCAATATGTATGCTATAACTG CCTTGCTGATGGTGCTTTTAACATATGGTATGGAAACCGGATTTTTCCGGTTTGCCAATAAGGGGGTGGATGATCCGATG CGCGTCTATTCCACTACTTTGCTTTCGGTAGGGGCGACTGCGCTCTTGTTTTTAATCGTTTGTCTTTCTTTTCTGCATCC CATAGCAGGTTTCTTGGGATATGGAGAGCATCCGTGGTATATGGGGATGATGCTGATTGTAGTCGCAATGGACGCTTTCC AAGCTATTCCTTTTGCTTATTTGCGATATAAGAAACGCCCTGTTAAGTTCGCTGCATTGAAATTGTTGTTCATTTTTGCC AGCATTGCCTTGAATATCGCTTATTTTGTAGGTATGAAAGGAGAGAATGTCGGAGTGGCTTTTGCTATAAATCTGGCTTG TACTTCTTTGGTGATGCTGTGTATGTGGAAAGAATTGGTGGGCTTCAGGTATGTGCTGGACAGGGAGTTGTTGCGGCGTA TGCTGCATTATTCTTTCCCGATATTGATTCTGGGTATTGCCGGAATCTTAAATCAGGTAGCCGATAAAATTATTTTTCCG TTTGTTTATCCTGATAAGGCGGAGGCGACCATCCAGTTGGGTATTTATGGGGCTGCCAGTAAAATAGCTATGATAATGGC CATGCTGACACAGGCTTTCCGGTTTGCATACGAGCCGTTTGTTTTTAGTAAGAGTAAAGAAAAGGATAGTCGGGAAATGT ATGCCAAAGCGATGAAGTTTTTCATTATCTTCACTTTGCTGGCCTTTTTGGCTGTTATGTTTTACCTTGATATATTGCGT TATATTTTAGGACGTGATTATTGGGTAGGGCTTAAAGTTGTACCTATTGTCATGGCTGCCGAAATGTTTATGGGTATTTA TTTCAATCTTTCTTTTTGGTATAAGCTGATTGATGAAACAAAATGGGGAGCTTATTTTTCATTGGTGGGATGCAGTATCA TTATCCTGATAAATATTTTCCTTATTCCGGTATTTGGCTATATGGCGTGTGCGTGGGCAGGTTTTGCCGGATATGGAGTA GCTATGCTTCTCTCTTATTTTGTAGGGCAGAAAAAATATCCTATTAATTATGATTTGAAAGCGATAGGTAACTATGTGGC GTTAGCGCTGGTACTTTACATTGTTTCAGTTTATCTTCCTATTCAAAATATATTCTTGTTGTTGGGTGTTCGTACATTAC TGTTGTTATTGTTTGTGGCATATATTGTGAAAACGGACTTCCCCTTGCAGCAGATACCTGTTATAAACCGATACATAAAG AAATAG
Upstream 100 bases:
>100_bases AAAACGTACTCCGCGTGGACGTGAGGTCACGGAACTGGCCTATATGCACCTGGGACGGAGCATTTATAATAGTCAGAAGA CATTATTTGATGATTAAAAG
Downstream 100 bases:
>100_bases CTATGAGTGACCTGAAGAATGATTTGAAGAATGTGCCTTATATAAAGCAGTTCTTTGGTGAATATCTTGATTTGCGCAAG GATAAGGATAATGAAGCCTT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Multi Anti Extrusion Protein MatE; Polysaccharide Biosynthesis Domain-Containing Protein; Polysaccharide Biosynthesis Transmembrane Protein
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MAGLKALAKETAIYGMSSIIGRFLNYLLVPIYTNALPVESGGYGIITNMYAITALLMVLLTYGMETGFFRFANKGVDDPM RVYSTTLLSVGATALLFLIVCLSFLHPIAGFLGYGEHPWYMGMMLIVVAMDAFQAIPFAYLRYKKRPVKFAALKLLFIFA SIALNIAYFVGMKGENVGVAFAINLACTSLVMLCMWKELVGFRYVLDRELLRRMLHYSFPILILGIAGILNQVADKIIFP FVYPDKAEATIQLGIYGAASKIAMIMAMLTQAFRFAYEPFVFSKSKEKDSREMYAKAMKFFIIFTLLAFLAVMFYLDILR YILGRDYWVGLKVVPIVMAAEMFMGIYFNLSFWYKLIDETKWGAYFSLVGCSIIILINIFLIPVFGYMACAWAGFAGYGV AMLLSYFVGQKKYPINYDLKAIGNYVALALVLYIVSVYLPIQNIFLLLGVRTLLLLLFVAYIVKTDFPLQQIPVINRYIK K
Sequences:
>Translated_481_residues MAGLKALAKETAIYGMSSIIGRFLNYLLVPIYTNALPVESGGYGIITNMYAITALLMVLLTYGMETGFFRFANKGVDDPM RVYSTTLLSVGATALLFLIVCLSFLHPIAGFLGYGEHPWYMGMMLIVVAMDAFQAIPFAYLRYKKRPVKFAALKLLFIFA SIALNIAYFVGMKGENVGVAFAINLACTSLVMLCMWKELVGFRYVLDRELLRRMLHYSFPILILGIAGILNQVADKIIFP FVYPDKAEATIQLGIYGAASKIAMIMAMLTQAFRFAYEPFVFSKSKEKDSREMYAKAMKFFIIFTLLAFLAVMFYLDILR YILGRDYWVGLKVVPIVMAAEMFMGIYFNLSFWYKLIDETKWGAYFSLVGCSIIILINIFLIPVFGYMACAWAGFAGYGV AMLLSYFVGQKKYPINYDLKAIGNYVALALVLYIVSVYLPIQNIFLLLGVRTLLLLLFVAYIVKTDFPLQQIPVINRYIK K >Mature_480_residues AGLKALAKETAIYGMSSIIGRFLNYLLVPIYTNALPVESGGYGIITNMYAITALLMVLLTYGMETGFFRFANKGVDDPMR VYSTTLLSVGATALLFLIVCLSFLHPIAGFLGYGEHPWYMGMMLIVVAMDAFQAIPFAYLRYKKRPVKFAALKLLFIFAS IALNIAYFVGMKGENVGVAFAINLACTSLVMLCMWKELVGFRYVLDRELLRRMLHYSFPILILGIAGILNQVADKIIFPF VYPDKAEATIQLGIYGAASKIAMIMAMLTQAFRFAYEPFVFSKSKEKDSREMYAKAMKFFIIFTLLAFLAVMFYLDILRY ILGRDYWVGLKVVPIVMAAEMFMGIYFNLSFWYKLIDETKWGAYFSLVGCSIIILINIFLIPVFGYMACAWAGFAGYGVA MLLSYFVGQKKYPINYDLKAIGNYVALALVLYIVSVYLPIQNIFLLLGVRTLLLLLFVAYIVKTDFPLQQIPVINRYIKK
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54342; Mature: 54211
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLKALAKETAIYGMSSIIGRFLNYLLVPIYTNALPVESGGYGIITNMYAITALLMVLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH TYGMETGFFRFANKGVDDPMRVYSTTLLSVGATALLFLIVCLSFLHPIAGFLGYGEHPWY HHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MGMMLIVVAMDAFQAIPFAYLRYKKRPVKFAALKLLFIFASIALNIAYFVGMKGENVGVA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FAINLACTSLVMLCMWKELVGFRYVLDRELLRRMLHYSFPILILGIAGILNQVADKIIFP EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC FVYPDKAEATIQLGIYGAASKIAMIMAMLTQAFRFAYEPFVFSKSKEKDSREMYAKAMKF CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH FIIFTLLAFLAVMFYLDILRYILGRDYWVGLKVVPIVMAAEMFMGIYFNLSFWYKLIDET HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KWGAYFSLVGCSIIILINIFLIPVFGYMACAWAGFAGYGVAMLLSYFVGQKKYPINYDLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AIGNYVALALVLYIVSVYLPIQNIFLLLGVRTLLLLLFVAYIVKTDFPLQQIPVINRYIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC K C >Mature Secondary Structure AGLKALAKETAIYGMSSIIGRFLNYLLVPIYTNALPVESGGYGIITNMYAITALLMVLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH TYGMETGFFRFANKGVDDPMRVYSTTLLSVGATALLFLIVCLSFLHPIAGFLGYGEHPWY HHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MGMMLIVVAMDAFQAIPFAYLRYKKRPVKFAALKLLFIFASIALNIAYFVGMKGENVGVA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FAINLACTSLVMLCMWKELVGFRYVLDRELLRRMLHYSFPILILGIAGILNQVADKIIFP EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC FVYPDKAEATIQLGIYGAASKIAMIMAMLTQAFRFAYEPFVFSKSKEKDSREMYAKAMKF CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH FIIFTLLAFLAVMFYLDILRYILGRDYWVGLKVVPIVMAAEMFMGIYFNLSFWYKLIDET HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KWGAYFSLVGCSIIILINIFLIPVFGYMACAWAGFAGYGVAMLLSYFVGQKKYPINYDLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AIGNYVALALVLYIVSVYLPIQNIFLLLGVRTLLLLLFVAYIVKTDFPLQQIPVINRYIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA