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The map label for this gene is 150003838

Identifier: 150003838

GI number: 150003838

Start: 1710095

End: 1710628

Strand: Direct

Name: 150003838

Synonym: BVU_1270

Alternate gene names: NA

Gene position: 1710095-1710628 (Clockwise)

Preceding gene: 150003834

Following gene: 150003839

Centisome position: 33.12

GC content: 42.51

Gene sequence:

>534_bases
ATGGATAAAATTGCTATTTTCTGTTCCGCATCCGAGAATATAGAGCCTGTGTTTTTTGAAAAAGCACGTGAGTTGGGCGT
TTGGATGGGACAAAACAAGAAGACGTTAGTGTATGGAGGTGCTAATATCGGATTGATGGAATGTATTGCCAAGGCAGCCA
AAGACAACGGTTCGATGATAATGGGAGTTATTCCGACCAAGCTGGAAGAACGTGGACGAGCCAGCGATTTGGTGGATGTG
ACTTTCCGTACGGATAATTTGAGTGACCGTAAAGATGTGATGTTGAATGAATCGGATGTAGTGATAGCTTTGCCGGGAGG
AGTGGGTACACTGGATGAGGTTTTTCATGTAATGGCGGCCGCTACGCTGGACTATCATCGTAAAAAAGTAATTTTTTATA
ATATAAATGGCTTTTGGAATGGCATTATCGACTTTTTGGCCGGATTGGAGAGGCAGCATTTTGCCCATCATCCGTTGAAC
AGTTATTTTGCTGTTGCCAATGACTTGAGAGAACTAACCGAACTACTTAAATAA

Upstream 100 bases:

>100_bases
TTTTGCTTCAAATAAGTTTCGGTTGGCAAAAATACAACAAAAGTTATTGCCGTTCTTCAAAAAATGCAGATATTTGTATT
TACTAACAGAAAACAAGATG

Downstream 100 bases:

>100_bases
TATTCATGTAACCTATTATGATGACATCTATACACGAATTGTTGCAGAAAGAGGCTCAGGCTGTTTTGAATATTCCTATA
ACTGATGCTTATGAGAAAGC

Product: lysine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MDKIAIFCSASENIEPVFFEKARELGVWMGQNKKTLVYGGANIGLMECIAKAAKDNGSMIMGVIPTKLEERGRASDLVDV
TFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKVIFYNINGFWNGIIDFLAGLERQHFAHHPLN
SYFAVANDLRELTELLK

Sequences:

>Translated_177_residues
MDKIAIFCSASENIEPVFFEKARELGVWMGQNKKTLVYGGANIGLMECIAKAAKDNGSMIMGVIPTKLEERGRASDLVDV
TFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKVIFYNINGFWNGIIDFLAGLERQHFAHHPLN
SYFAVANDLRELTELLK
>Mature_177_residues
MDKIAIFCSASENIEPVFFEKARELGVWMGQNKKTLVYGGANIGLMECIAKAAKDNGSMIMGVIPTKLEERGRASDLVDV
TFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKVIFYNINGFWNGIIDFLAGLERQHFAHHPLN
SYFAVANDLRELTELLK

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=200, Percent_Identity=27, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 19738; Mature: 19738

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIAIFCSASENIEPVFFEKARELGVWMGQNKKTLVYGGANIGLMECIAKAAKDNGSMI
CCCEEEEEECCCCCCHHHHHHHHHHCCEECCCCCEEEECCCCCCHHHHHHHHHCCCCCEE
MGVIPTKLEERGRASDLVDVTFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAA
EEECCCHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHH
ATLDYHRKKVIFYNINGFWNGIIDFLAGLERQHFAHHPLNSYFAVANDLRELTELLK
HHHHHCCEEEEEEECCCHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDKIAIFCSASENIEPVFFEKARELGVWMGQNKKTLVYGGANIGLMECIAKAAKDNGSMI
CCCEEEEEECCCCCCHHHHHHHHHHCCEECCCCCEEEECCCCCCHHHHHHHHHCCCCCEE
MGVIPTKLEERGRASDLVDVTFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAA
EEECCCHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHH
ATLDYHRKKVIFYNINGFWNGIIDFLAGLERQHFAHHPLNSYFAVANDLRELTELLK
HHHHHCCEEEEEEECCCHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]