| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is engD [H]
Identifier: 150003773
GI number: 150003773
Start: 1623158
End: 1624261
Strand: Reverse
Name: engD [H]
Synonym: BVU_1205
Alternate gene names: 150003773
Gene position: 1624261-1623158 (Counterclockwise)
Preceding gene: 150003774
Following gene: 150003772
Centisome position: 31.46
GC content: 44.84
Gene sequence:
>1104_bases ATGGCTTTACAATGTGGTATTGTCGGTCTTCCAAACGTAGGAAAGTCGACACTTTTTAATTGTTTATCGAATGCAAAGGC TCAAGCAGCCAACTTCCCTTTCTGTACCATCGAACCGAATGTAGGTGTCATCACCGTTCCTGATGAACGCCTGACCAAAC TTGCCGAACTGGTTCATCCGGGACGTATCGTTCCCACTACTGTAGAAATTGTTGACATTGCAGGACTTGTAAAAGGGGCT AGCAAAGGTGAAGGGCTGGGAAACAAGTTTCTGGCAAATATCCGTGAAACAGATGCTATCCTGCACGTACTCCGTTGTTT TGACGATGAAAATGTAACTCATGTAGACGGTAGTGTAGATCCGGTACGTGACAAAGAAATCATTGACACCGAACTCCAGC TGAAAGATTTAGAAACCATTGAAAGCCGTATTCAAAAAGTACAAAAACAGGCACAGACGGGCGGTGACAAACAAGCAAAA CAAATGTACGACATCCTTGTTAAATATAAAGACGCATTGGAACAAGGCAAATCTGCGCGTACCGTACAATTTGACAGCAA AGACGAACAAAAAATCGCAAAAGAACTGTTCTTGCTGACCAGCAAACCAGTGATGTACGTATGCAACGTGGACGAAGCAA GTGCTGCTACCGGCAATAAATATGTAGAACAAGTACGCGAAGCCGTAAAAGAAGAAAATGCAGAAATTCTGGTCGTAGCC GCCAAAACCGAAGCCGATATCGCAGAACTTGAAACCTATGAAGACCGCCAGATGTTCCTTCAGGAAGTCGGTCTGAAAGA ATCAGGTGTAAACCGTCTGATCAAATCGGCTTATCACCTGCTGGAACTGGAAACCTTCATCACCGCCGGAGAAATGGAAG TAAAAGCCTGGACCTATCGTAAAGGATGGAAAGCCCCCCAATGTGCAGGAGTCATCCACACCGATTTCGAGAAAGGATTT ATCCGTGCCGAGGTAATCAAGTACGAAGACTACATTAAATATGGTTCGGAAGCCGCCGTGAAAGAGGCTGGAAAAATGGG CGTGGAAGGTAAAGAATACGTAGTACAGGACGGTGACATCATGCACTTCCGTTTCAATGTATAA
Upstream 100 bases:
>100_bases TAAAAAAGCCAAATCTGACTTCAATATGAAGTCTGATACAAAAAGAATGGTTATCTTTGCAAACAAATAGATAGATAATA ATCAAAAAAACAAATAGATA
Downstream 100 bases:
>100_bases GGTAAATCAAAACGCAAAAGACTTGTCATGCAATGCATGAAAAAACATCAGGAAACCAGCAAAACTGATGGCAGACCGAT AAGTCAGTGTTTTGTTTCCT
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MALQCGIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVPTTVEIVDIAGLVKGA SKGEGLGNKFLANIRETDAILHVLRCFDDENVTHVDGSVDPVRDKEIIDTELQLKDLETIESRIQKVQKQAQTGGDKQAK QMYDILVKYKDALEQGKSARTVQFDSKDEQKIAKELFLLTSKPVMYVCNVDEASAATGNKYVEQVREAVKEENAEILVVA AKTEADIAELETYEDRQMFLQEVGLKESGVNRLIKSAYHLLELETFITAGEMEVKAWTYRKGWKAPQCAGVIHTDFEKGF IRAEVIKYEDYIKYGSEAAVKEAGKMGVEGKEYVVQDGDIMHFRFNV
Sequences:
>Translated_367_residues MALQCGIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVPTTVEIVDIAGLVKGA SKGEGLGNKFLANIRETDAILHVLRCFDDENVTHVDGSVDPVRDKEIIDTELQLKDLETIESRIQKVQKQAQTGGDKQAK QMYDILVKYKDALEQGKSARTVQFDSKDEQKIAKELFLLTSKPVMYVCNVDEASAATGNKYVEQVREAVKEENAEILVVA AKTEADIAELETYEDRQMFLQEVGLKESGVNRLIKSAYHLLELETFITAGEMEVKAWTYRKGWKAPQCAGVIHTDFEKGF IRAEVIKYEDYIKYGSEAAVKEAGKMGVEGKEYVVQDGDIMHFRFNV >Mature_366_residues ALQCGIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHPGRIVPTTVEIVDIAGLVKGAS KGEGLGNKFLANIRETDAILHVLRCFDDENVTHVDGSVDPVRDKEIIDTELQLKDLETIESRIQKVQKQAQTGGDKQAKQ MYDILVKYKDALEQGKSARTVQFDSKDEQKIAKELFLLTSKPVMYVCNVDEASAATGNKYVEQVREAVKEENAEILVVAA KTEADIAELETYEDRQMFLQEVGLKESGVNRLIKSAYHLLELETFITAGEMEVKAWTYRKGWKAPQCAGVIHTDFEKGFI RAEVIKYEDYIKYGSEAAVKEAGKMGVEGKEYVVQDGDIMHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=371, Percent_Identity=49.5956873315364, Blast_Score=344, Evalue=7e-95, Organism=Homo sapiens, GI58761502, Length=229, Percent_Identity=44.9781659388646, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI24308117, Length=148, Percent_Identity=28.3783783783784, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI111955139, Length=99, Percent_Identity=34.3434343434343, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1787454, Length=367, Percent_Identity=56.6757493188011, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1789574, Length=128, Percent_Identity=32.8125, Blast_Score=81, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=45.9016393442623, Blast_Score=322, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6319499, Length=373, Percent_Identity=41.5549597855228, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6321773, Length=382, Percent_Identity=36.6492146596859, Blast_Score=221, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321649, Length=145, Percent_Identity=40, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6321962, Length=129, Percent_Identity=29.4573643410853, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640873, Length=368, Percent_Identity=47.554347826087, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24640877, Length=368, Percent_Identity=47.554347826087, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24640875, Length=368, Percent_Identity=47.554347826087, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24640879, Length=327, Percent_Identity=45.565749235474, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI24585318, Length=102, Percent_Identity=36.2745098039216, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 40800; Mature: 40669
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQCGIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHP CCEEECCCCCCCCCHHHHHHHHHCCCHHHCCCCEEEECCCCCEEECCHHHHHHHHHHHCC GRIVPTTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENVTHVDGSVD CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PVRDKEIIDTELQLKDLETIESRIQKVQKQAQTGGDKQAKQMYDILVKYKDALEQGKSAR CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC TVQFDSKDEQKIAKELFLLTSKPVMYVCNVDEASAATGNKYVEQVREAVKEENAEILVVA EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCEEEEE AKTEADIAELETYEDRQMFLQEVGLKESGVNRLIKSAYHLLELETFITAGEMEVKAWTYR ECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC KGWKAPQCAGVIHTDFEKGFIRAEVIKYEDYIKYGSEAAVKEAGKMGVEGKEYVVQDGDI CCCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCE MHFRFNV EEEEECC >Mature Secondary Structure ALQCGIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLTKLAELVHP CEEECCCCCCCCCHHHHHHHHHCCCHHHCCCCEEEECCCCCEEECCHHHHHHHHHHHCC GRIVPTTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAILHVLRCFDDENVTHVDGSVD CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PVRDKEIIDTELQLKDLETIESRIQKVQKQAQTGGDKQAKQMYDILVKYKDALEQGKSAR CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC TVQFDSKDEQKIAKELFLLTSKPVMYVCNVDEASAATGNKYVEQVREAVKEENAEILVVA EEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCEEEEE AKTEADIAELETYEDRQMFLQEVGLKESGVNRLIKSAYHLLELETFITAGEMEVKAWTYR ECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC KGWKAPQCAGVIHTDFEKGFIRAEVIKYEDYIKYGSEAAVKEAGKMGVEGKEYVVQDGDI CCCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCE MHFRFNV EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]