| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003709
Identifier: 150003709
GI number: 150003709
Start: 1535145
End: 1535921
Strand: Reverse
Name: 150003709
Synonym: BVU_1140
Alternate gene names: NA
Gene position: 1535921-1535145 (Counterclockwise)
Preceding gene: 150003710
Following gene: 150003706
Centisome position: 29.75
GC content: 41.96
Gene sequence:
>777_bases ATGTCAACAGTCATTTATCCTTCTCCCATCTTCGGTCCGGTACATAGTCGTCGTTTGGGAGTGTCTTTAGGAATCAATCT TCTTCCTGAAGATGGTAAATTTTGTACCTTCGATTGCATTTATTGCGAATGTGGTTTTAATGAAGATCATCGTCCCCAAA AGAAACTGCCTACTCGCGAGCAGGTTCGTGAGGCTTTGGAAGCCCGTTTGATTGATATGCAGCAAAATGGTCCTAAACCG GATGTGCTGACTTTTGCCGGTAATGGCGAACCGACGGCTCATCCTCACTTTGCAGGAATTATAGAGGATACTTTGGCATT GCGTGATATATATTTTCCTCAGGCAAAAGTGAGTGTATTGAGTAATTCTACTTTTATTCACAAACCGGAGGTATTTGATG CATTGAATAAGATAGATAATAATATATTGAAGCTGGATACTATTGATACGGATTATATTCGATTGACAGACCGCCCGACC GGGCACTATGATGTACGGAAAATTATAAAAGGGATGAAAGCTTTCAAAGGTAATCTGATTATTCAGACCATGTTCATGAA AGGTAAATATCAAGGGCAGGATGTGGATAATACTTCAGATCGGTATGTGCTGCCCTGGCTGGAAACGGTGAAAGAGATTG CTCCCCGTCAGGTGATGATTTACACCATCGACCGTGAAACGCCCGATCATGATTTGGAAAAGGCTACTCATGAGGAATTG GACAGAATAGGAAAATTGATAAAGGATTCCGGCATTCCGGTATCGGTCTCGTATTGA
Upstream 100 bases:
>100_bases AATTGACGGCAGTACAAAGAGTGACCTTTATTTGCAGTTGAGACTGAAATTTTGAAAAACATTCTGTATTTTTGTACTGT TATCAACTGAAAAAAGAACT
Downstream 100 bases:
>100_bases GAAAAAAGTAAGTTGACTTCAAAGGGCAAGTAAGTTGACTTACTTTGCCGATGAAGTGAACTTACTTTGCTCATGAACAT ATCTTACTTTTTCAGGTCAC
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSTVIYPSPIFGPVHSRRLGVSLGINLLPEDGKFCTFDCIYCECGFNEDHRPQKKLPTREQVREALEARLIDMQQNGPKP DVLTFAGNGEPTAHPHFAGIIEDTLALRDIYFPQAKVSVLSNSTFIHKPEVFDALNKIDNNILKLDTIDTDYIRLTDRPT GHYDVRKIIKGMKAFKGNLIIQTMFMKGKYQGQDVDNTSDRYVLPWLETVKEIAPRQVMIYTIDRETPDHDLEKATHEEL DRIGKLIKDSGIPVSVSY
Sequences:
>Translated_258_residues MSTVIYPSPIFGPVHSRRLGVSLGINLLPEDGKFCTFDCIYCECGFNEDHRPQKKLPTREQVREALEARLIDMQQNGPKP DVLTFAGNGEPTAHPHFAGIIEDTLALRDIYFPQAKVSVLSNSTFIHKPEVFDALNKIDNNILKLDTIDTDYIRLTDRPT GHYDVRKIIKGMKAFKGNLIIQTMFMKGKYQGQDVDNTSDRYVLPWLETVKEIAPRQVMIYTIDRETPDHDLEKATHEEL DRIGKLIKDSGIPVSVSY >Mature_257_residues STVIYPSPIFGPVHSRRLGVSLGINLLPEDGKFCTFDCIYCECGFNEDHRPQKKLPTREQVREALEARLIDMQQNGPKPD VLTFAGNGEPTAHPHFAGIIEDTLALRDIYFPQAKVSVLSNSTFIHKPEVFDALNKIDNNILKLDTIDTDYIRLTDRPTG HYDVRKIIKGMKAFKGNLIIQTMFMKGKYQGQDVDNTSDRYVLPWLETVKEIAPRQVMIYTIDRETPDHDLEKATHEELD RIGKLIKDSGIPVSVSY
Specific function: Unknown
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0026 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 29334; Mature: 29203
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIYPSPIFGPVHSRRLGVSLGINLLPEDGKFCTFDCIYCECGFNEDHRPQKKLPTRE CCCEECCCCCCCCCCCCEEEEEECCEECCCCCCEEEEEEEEEEECCCCCCCCHHCCCCHH QVREALEARLIDMQQNGPKPDVLTFAGNGEPTAHPHFAGIIEDTLALRDIYFPQAKVSVL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEE SNSTFIHKPEVFDALNKIDNNILKLDTIDTDYIRLTDRPTGHYDVRKIIKGMKAFKGNLI CCCCEEECCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEE IQTMFMKGKYQGQDVDNTSDRYVLPWLETVKEIAPRQVMIYTIDRETPDHDLEKATHEEL EEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH DRIGKLIKDSGIPVSVSY HHHHHHHHCCCCEEEEEC >Mature Secondary Structure STVIYPSPIFGPVHSRRLGVSLGINLLPEDGKFCTFDCIYCECGFNEDHRPQKKLPTRE CCEECCCCCCCCCCCCEEEEEECCEECCCCCCEEEEEEEEEEECCCCCCCCHHCCCCHH QVREALEARLIDMQQNGPKPDVLTFAGNGEPTAHPHFAGIIEDTLALRDIYFPQAKVSVL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEE SNSTFIHKPEVFDALNKIDNNILKLDTIDTDYIRLTDRPTGHYDVRKIIKGMKAFKGNLI CCCCEEECCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEE IQTMFMKGKYQGQDVDNTSDRYVLPWLETVKEIAPRQVMIYTIDRETPDHDLEKATHEEL EEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH DRIGKLIKDSGIPVSVSY HHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]