| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is rbr [H]
Identifier: 150003706
GI number: 150003706
Start: 1531425
End: 1532003
Strand: Reverse
Name: rbr [H]
Synonym: BVU_1137
Alternate gene names: 150003706
Gene position: 1532003-1531425 (Counterclockwise)
Preceding gene: 150003709
Following gene: 150003701
Centisome position: 29.67
GC content: 41.62
Gene sequence:
>579_bases ATGGCTAAAAGCGTAAAAGGTACACAGACAGAGAAAAACTTGCTGAATTCATTTGCAGGTGAATCACAGGCTAGAATGCG TTATACTTACTTTGCAAGTACAGCAAAGAAGGAAGGTTATGAACAAATAGCAGCTATTTTTACAGAAACAGCTGATCAGG AAAAAGAACATGCAAAACGTATGTTTAAATGGTTGGAAGGCGGTATGGTAGAAATTACTGCCAGCTATCCTGCAGGTATC ATTGGTACCACTATGGAAAATTTGAAAGCTGCCGCTGCCGGTGAAAATGAAGAATGGACTACTGATTACCCTCACTTTGC TGATGTGGCCGATCAGGAAGGTTTTCCTGCTATCGCTACTATGTATCGCAGAATCGCTGAAGCTGAAAAGGGGCATGAGG AAAGATATCTGGCTTTATTGAAGAATGTGGAAGAAGGCACAGTATTCAAGAAAGCGGAAGAAACTGTATGGCAGTGCCGT AACTGCGGTTACATTTATGTAGGTACGGAAGCTCCTGAAGTATGTCCTGCATGTCTGCATCCGCAAGCTTATTTCGAAGT GAAGAAGAATAATTATTGA
Upstream 100 bases:
>100_bases ATAAAAACGTAATTGTAATAAATACAATTTTGAAATAAAATATATATCTTTGTGTCATCAACAGATGATCAAATAATACT AACTAATAAAACTAACAATT
Downstream 100 bases:
>100_bases TTGAAATAAAACCACTCGTTCATCATGGATCCGGTTTCTCTGAAAAGGGGAAACCGGATTTTTTATTTTTAGGAAATGAT TTTTGATTAGTTTTTATTCT
Product: rubrerythrin
Products: NA
Alternate protein names: RR [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAKSVKGTQTEKNLLNSFAGESQARMRYTYFASTAKKEGYEQIAAIFTETADQEKEHAKRMFKWLEGGMVEITASYPAGI IGTTMENLKAAAAGENEEWTTDYPHFADVADQEGFPAIATMYRRIAEAEKGHEERYLALLKNVEEGTVFKKAEETVWQCR NCGYIYVGTEAPEVCPACLHPQAYFEVKKNNY
Sequences:
>Translated_192_residues MAKSVKGTQTEKNLLNSFAGESQARMRYTYFASTAKKEGYEQIAAIFTETADQEKEHAKRMFKWLEGGMVEITASYPAGI IGTTMENLKAAAAGENEEWTTDYPHFADVADQEGFPAIATMYRRIAEAEKGHEERYLALLKNVEEGTVFKKAEETVWQCR NCGYIYVGTEAPEVCPACLHPQAYFEVKKNNY >Mature_191_residues AKSVKGTQTEKNLLNSFAGESQARMRYTYFASTAKKEGYEQIAAIFTETADQEKEHAKRMFKWLEGGMVEITASYPAGII GTTMENLKAAAAGENEEWTTDYPHFADVADQEGFPAIATMYRRIAEAEKGHEERYLALLKNVEEGTVFKKAEETVWQCRN CGYIYVGTEAPEVCPACLHPQAYFEVKKNNY
Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 21638; Mature: 21507
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSVKGTQTEKNLLNSFAGESQARMRYTYFASTAKKEGYEQIAAIFTETADQEKEHAKR CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MFKWLEGGMVEITASYPAGIIGTTMENLKAAAAGENEEWTTDYPHFADVADQEGFPAIAT HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHH MYRRIAEAEKGHEERYLALLKNVEEGTVFKKAEETVWQCRNCGYIYVGTEAPEVCPACLH HHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCC PQAYFEVKKNNY CHHHEEECCCCC >Mature Secondary Structure AKSVKGTQTEKNLLNSFAGESQARMRYTYFASTAKKEGYEQIAAIFTETADQEKEHAKR CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MFKWLEGGMVEITASYPAGIIGTTMENLKAAAAGENEEWTTDYPHFADVADQEGFPAIAT HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHH MYRRIAEAEKGHEERYLALLKNVEEGTVFKKAEETVWQCRNCGYIYVGTEAPEVCPACLH HHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCC PQAYFEVKKNNY CHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11972784; 12949112 [H]