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The map label for this gene is rbfA [H]

Identifier: 150003447

GI number: 150003447

Start: 1176946

End: 1177281

Strand: Reverse

Name: rbfA [H]

Synonym: BVU_0874

Alternate gene names: 150003447

Gene position: 1177281-1176946 (Counterclockwise)

Preceding gene: 150003448

Following gene: 150003446

Centisome position: 22.8

GC content: 41.96

Gene sequence:

>336_bases
ATGGAAACGACCAGACAAAATAAGATTTCTCGTTTGATCCAAAAGGAGTTGAGTGAGATTTTCCTGCTTCAGACCAAGTC
CATGAATGGTGTTTTGGTGTCGGTAAGTGCTGTCCGCATCAGTCCCGATATGAGTATTGCACGTGTCTATCTCAGCGTGT
TCCCTTCTGAGAGGAGCCAGGAAATAGTAAAGAATATCAATGATAATATGAAATCCATCCGTTATGAGTTAGGAACACGG
GTACGCCATCAGTTGCGCATCATTCCCGAGTTGAAATTCTTTGTGGATGATTCATTGGATTATGCCGAACGTATAGACGA
ATTGTTGAAAAAGTAG

Upstream 100 bases:

>100_bases
GGGCTGACAATCATAAGAAAATGTTGAATAATGTGCCAATAGGTTATGCTATGAACCGTATGGCATATTAACAAATTAGC
AAACTGAATAATTATTAATT

Downstream 100 bases:

>100_bases
AACCGGGCGGTGAATTTTCCCTTTTATATAGCGAAGCGTTATCTTTTTTCCAAGAAGTCGCACAATGCCATTAATGTCAT
TTCAGCCATTTCCGTCTGCG

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
METTRQNKISRLIQKELSEIFLLQTKSMNGVLVSVSAVRISPDMSIARVYLSVFPSERSQEIVKNINDNMKSIRYELGTR
VRHQLRIIPELKFFVDDSLDYAERIDELLKK

Sequences:

>Translated_111_residues
METTRQNKISRLIQKELSEIFLLQTKSMNGVLVSVSAVRISPDMSIARVYLSVFPSERSQEIVKNINDNMKSIRYELGTR
VRHQLRIIPELKFFVDDSLDYAERIDELLKK
>Mature_111_residues
METTRQNKISRLIQKELSEIFLLQTKSMNGVLVSVSAVRISPDMSIARVYLSVFPSERSQEIVKNINDNMKSIRYELGTR
VRHQLRIIPELKFFVDDSLDYAERIDELLKK

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA [H]

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR000238
- ProDom:   PD007327 [H]

Pfam domain/function: PF02033 RBFA [H]

EC number: NA

Molecular weight: Translated: 12972; Mature: 12972

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTRQNKISRLIQKELSEIFLLQTKSMNGVLVSVSAVRISPDMSIARVYLSVFPSERSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHH
EIVKNINDNMKSIRYELGTRVRHQLRIIPELKFFVDDSLDYAERIDELLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
METTRQNKISRLIQKELSEIFLLQTKSMNGVLVSVSAVRISPDMSIARVYLSVFPSERSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHH
EIVKNINDNMKSIRYELGTRVRHQLRIIPELKFFVDDSLDYAERIDELLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA