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The map label for this gene is rprY [H]

Identifier: 150003409

GI number: 150003409

Start: 1126151

End: 1126852

Strand: Reverse

Name: rprY [H]

Synonym: BVU_0832

Alternate gene names: 150003409

Gene position: 1126852-1126151 (Counterclockwise)

Preceding gene: 150003410

Following gene: 150003404

Centisome position: 21.82

GC content: 39.46

Gene sequence:

>702_bases
ATGATAAAACTGTTGTTGGTGGAAGATGATGCCAATCTTTGTTATATTATTCGTGGTGGATTGGAGGATATGATAGGTGG
ATACGAGGTGATGACCGCTTCTAATGGCGAAGAAGGGTTGAAGATATGGAAGGAGCAACATCTTGATATCATTATTTCAG
ACATTGAGATGCCTGTTATGGATGGTTATGAAATGGTACGTCGTATTCGGGAAACGGATGGATTTATTCCCATTGTTTTT
ACCTCGGGCAGGGTTTCGCCTAAAGATGTGGTGAAAGGTTATGAATTGGGGGTGAATAATTATATTAAGAAACCTTTTTT
GGCGGAAGAACTGGATGCGCATATTGGTGCTTTGTTGAAAATGAAGCGGGGAATGGGAGCCGCTAATGAAAGTGAGATTT
ATCGGATTGGTGAAAATTATACATTTGATGCTGTTCATGCAGTATTAAAGCATTCGTCGTGTGTACAAAAGACAATGACG
GAACGCGAAGCGAAATTGCTTCAGATGCTTTGTAAAAAGAAAAATGAACTAGTGAGGCGGGATATTATTCTTTCAAGACT
ATGGGATACGGAGGATGATTTTTTTGCATCACGTAGTCTCGATGTTTTTGTTACTCGACTTAGAAAATTGTTTGCTGATG
ATGAACGGATACAGATAAAGACTGTGAAAGGAGTGGGTTTATGTCTTTCGGACAAAGGATGA

Upstream 100 bases:

>100_bases
AAAAGTGTGTGTAGAAAGCATTGAAGGGGAGTATAGTGAATTTTTTCTTTTTTTGCCGAGTGGGGAGAAGAAATAAATAT
TTTTTAAGGAGGAAGATGAT

Downstream 100 bases:

>100_bases
ATATGTGTAATATAACATTTATTGTAAGTTCTTTTGGCATTTTCCGGATACTAAACGTTTTTAAGCAACTCGAAAAGATG
TGCATTGGTGAAATGACCGT

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIKLLLVEDDANLCYIIRGGLEDMIGGYEVMTASNGEEGLKIWKEQHLDIIISDIEMPVMDGYEMVRRIRETDGFIPIVF
TSGRVSPKDVVKGYELGVNNYIKKPFLAEELDAHIGALLKMKRGMGAANESEIYRIGENYTFDAVHAVLKHSSCVQKTMT
EREAKLLQMLCKKKNELVRRDIILSRLWDTEDDFFASRSLDVFVTRLRKLFADDERIQIKTVKGVGLCLSDKG

Sequences:

>Translated_233_residues
MIKLLLVEDDANLCYIIRGGLEDMIGGYEVMTASNGEEGLKIWKEQHLDIIISDIEMPVMDGYEMVRRIRETDGFIPIVF
TSGRVSPKDVVKGYELGVNNYIKKPFLAEELDAHIGALLKMKRGMGAANESEIYRIGENYTFDAVHAVLKHSSCVQKTMT
EREAKLLQMLCKKKNELVRRDIILSRLWDTEDDFFASRSLDVFVTRLRKLFADDERIQIKTVKGVGLCLSDKG
>Mature_233_residues
MIKLLLVEDDANLCYIIRGGLEDMIGGYEVMTASNGEEGLKIWKEQHLDIIISDIEMPVMDGYEMVRRIRETDGFIPIVF
TSGRVSPKDVVKGYELGVNNYIKKPFLAEELDAHIGALLKMKRGMGAANESEIYRIGENYTFDAVHAVLKHSSCVQKTMT
EREAKLLQMLCKKKNELVRRDIILSRLWDTEDDFFASRSLDVFVTRLRKLFADDERIQIKTVKGVGLCLSDKG

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=33.1877729257642, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=30.2631578947368, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=29.4372294372294, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=28.3185840707965, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=25.8474576271186, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790552, Length=231, Percent_Identity=29.004329004329, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=28.0172413793103, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786599, Length=234, Percent_Identity=26.0683760683761, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=25.6637168141593, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788713, Length=92, Percent_Identity=33.695652173913, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=104, Percent_Identity=32.6923076923077, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786911, Length=214, Percent_Identity=24.7663551401869, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI2367329, Length=235, Percent_Identity=27.6595744680851, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788550, Length=120, Percent_Identity=25, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787229, Length=191, Percent_Identity=27.2251308900524, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788905, Length=102, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26527; Mature: 26527

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLLVEDDANLCYIIRGGLEDMIGGYEVMTASNGEEGLKIWKEQHLDIIISDIEMPVM
CEEEEEEECCCCEEEEEECCHHHHHCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHH
DGYEMVRRIRETDGFIPIVFTSGRVSPKDVVKGYELGVNNYIKKPFLAEELDAHIGALLK
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH
MKRGMGAANESEIYRIGENYTFDAVHAVLKHSSCVQKTMTEREAKLLQMLCKKKNELVRR
HHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIILSRLWDTEDDFFASRSLDVFVTRLRKLFADDERIQIKTVKGVGLCLSDKG
HHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCC
>Mature Secondary Structure
MIKLLLVEDDANLCYIIRGGLEDMIGGYEVMTASNGEEGLKIWKEQHLDIIISDIEMPVM
CEEEEEEECCCCEEEEEECCHHHHHCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHH
DGYEMVRRIRETDGFIPIVFTSGRVSPKDVVKGYELGVNNYIKKPFLAEELDAHIGALLK
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH
MKRGMGAANESEIYRIGENYTFDAVHAVLKHSSCVQKTMTEREAKLLQMLCKKKNELVRR
HHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIILSRLWDTEDDFFASRSLDVFVTRLRKLFADDERIQIKTVKGVGLCLSDKG
HHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]