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The map label for this gene is ygiM [C]

Identifier: 148828410

GI number: 148828410

Start: 1864178

End: 1864789

Strand: Reverse

Name: ygiM [C]

Synonym: CGSHiGG_10095

Alternate gene names: 148828410

Gene position: 1864789-1864178 (Counterclockwise)

Preceding gene: 148828411

Following gene: 148828409

Centisome position: 98.81

GC content: 38.73

Gene sequence:

>612_bases
ATGAAAAAGATCTATAAAGCCTTAATCTCATCTTTACTTTTAAGCACATCAATAAATGTTGCTTATGCGGAAACCCAATA
TGTTACTGAAAATCTCAGTACGTTCTTACGCCGTGGTGCAGGCGAACAATTTAAAATTGCAGGTTCAATTCAAGCAGGCG
AAGCGGTGAATGTATTAGATCGCCAAGGCAAATACACACTCATTCGCGACAATAAAAATCGTGAAGCTTGGATTTTAAAT
TCAGACTTAAGCAGTACGCCAAGTAGTAAAGAAGAAAATCCAAAATTAAAAGCGCAAGTACAAGAATTAACCTTAAAACT
TAGTCGTTTAGATGGCGATTGGCAGCAACGTACCGTAGAAATGCAACGTCGAACCAAACAAGCTGAGCAACAAAGTGCGG
ATCTTTTAGAGCAAAATTCACAATTGAAACGTGAACTTGAAATGACCAAAAATAAAAATCGTGATTTAGAAGCGATACTT
GATGCAGGTAAACGAGAAATTGCGATCCAATGGTTTATTTATGGCGGTTCAGTATTAGGCGTAGGCTTACTCTTCGGCTT
GCTCATTCCTTATGTGTTACCAAAACGTCGCCGTCGTGATGGTTGGGCATAA

Upstream 100 bases:

>100_bases
TTATTTTCTATGTGCTAAGAACTATCTTTAATTAATTGATCTCAATAAAAAGTGCGGTTAATTTTAACCGCACTTTTGTT
GTGATGTTTAAGGGGAAAAA

Downstream 100 bases:

>100_bases
TCACGAATGAAAATTTATTTAGTTGGTGGGGCTGTTCGTGATCAATTATTGGGGTTACCAGTAAAAGATCGTGATTGGAT
TGTGGTAGGCGCAGACCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKKIYKALISSLLLSTSINVAYAETQYVTENLSTFLRRGAGEQFKIAGSIQAGEAVNVLDRQGKYTLIRDNKNREAWILN
SDLSSTPSSKEENPKLKAQVQELTLKLSRLDGDWQQRTVEMQRRTKQAEQQSADLLEQNSQLKRELEMTKNKNRDLEAIL
DAGKREIAIQWFIYGGSVLGVGLLFGLLIPYVLPKRRRRDGWA

Sequences:

>Translated_203_residues
MKKIYKALISSLLLSTSINVAYAETQYVTENLSTFLRRGAGEQFKIAGSIQAGEAVNVLDRQGKYTLIRDNKNREAWILN
SDLSSTPSSKEENPKLKAQVQELTLKLSRLDGDWQQRTVEMQRRTKQAEQQSADLLEQNSQLKRELEMTKNKNRDLEAIL
DAGKREIAIQWFIYGGSVLGVGLLFGLLIPYVLPKRRRRDGWA
>Mature_203_residues
MKKIYKALISSLLLSTSINVAYAETQYVTENLSTFLRRGAGEQFKIAGSIQAGEAVNVLDRQGKYTLIRDNKNREAWILN
SDLSSTPSSKEENPKLKAQVQELTLKLSRLDGDWQQRTVEMQRRTKQAEQQSADLLEQNSQLKRELEMTKNKNRDLEAIL
DAGKREIAIQWFIYGGSVLGVGLLFGLLIPYVLPKRRRRDGWA

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiM [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=195, Percent_Identity=40.5128205128205, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 23129; Mature: 23129

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYKALISSLLLSTSINVAYAETQYVTENLSTFLRRGAGEQFKIAGSIQAGEAVNVLD
CHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
RQGKYTLIRDNKNREAWILNSDLSSTPSSKEENPKLKAQVQELTLKLSRLDGDWQQRTVE
CCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
MQRRTKQAEQQSADLLEQNSQLKRELEMTKNKNRDLEAILDAGKREIAIQWFIYGGSVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEEECCHHHH
VGLLFGLLIPYVLPKRRRRDGWA
HHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure
MKKIYKALISSLLLSTSINVAYAETQYVTENLSTFLRRGAGEQFKIAGSIQAGEAVNVLD
CHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
RQGKYTLIRDNKNREAWILNSDLSSTPSSKEENPKLKAQVQELTLKLSRLDGDWQQRTVE
CCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
MQRRTKQAEQQSADLLEQNSQLKRELEMTKNKNRDLEAILDAGKREIAIQWFIYGGSVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEEECCHHHH
VGLLFGLLIPYVLPKRRRRDGWA
HHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]