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The map label for this gene is hifC [H]

Identifier: 148828398

GI number: 148828398

Start: 1848614

End: 1851127

Strand: Direct

Name: hifC [H]

Synonym: CGSHiGG_10035

Alternate gene names: 148828398

Gene position: 1848614-1851127 (Clockwise)

Preceding gene: 148828397

Following gene: 148828399

Centisome position: 97.96

GC content: 43.6

Gene sequence:

>2514_bases
GTGAAAACAAAAATTTTTCCTTTAAATAAAATTGCGTTGGCTTGCACCTTGCTACTGGCTAATCCTGTGGCGTGGGCAGA
AGACCAATTCGATGCATCCCTTTGGGGAGAAGGCTCGGTGTTGGGCATTGATTTTGCTCGATTTAATGTAAAAAATGCGG
TATTGCCAGGACGCTATGAAGCACAAATTTATGTGAATGGCGAAGAAAAAGGCGAAAGTGACATTATTTTTGCCGATAAT
CCTGCCACAGGTCGGGCAGAATTATGCCTTACGCCTAAACTTCAAGAAATACTGGATTTGATGGATGGAGCTATTGTGAA
ATCACCCGCAACGGAAGAAGATGCTTGCACCTTCGCTTCTGAGGCTATTCCGCAAGGCACCTTTGATTATCAAGGTGGCG
AGATGAAACTAAAACTTGAAATCCCTCAAGCATTAACCATTCGCCGACCAAGAGGCTATATTGCGCCGTCTCGTTGGCAA
ACAGGCACAAATGCTGCCTTTGCGAATTACGATATTAACTATTATCGTTCCAGCAATCCTGATGTGAAATCTGAAAGTTT
GTATGTAGGATTACGCAGTGGTGTGAATTTAGGCAATTGGGCATTGCGACATAATGGCAGTTTTAGCCGTTTTAAAAATC
ACAGTAGTTCAGGTTTTACTGATAAAGGCAAAAATCATTATGAACGTGGCGATACCTATTTACAACGAGATTTCGCCATG
CTTCGTGGCAATGTTACTGTTGGGGATTTTTTCAGTACTGCCCGTATTGGGGAAAATTTTGGTCTGCGTGGTTTGCGTAT
TGCCTCTGATGATAGAATGCTTGCCCCATCACAACGTGGTTTTGCCCCCGTGGTGCGTGGTGTGGCGAATACCAATGCAA
AAGTCAGCATTAAACAAAATGGCTATACCATTTATCAAATTACCGTACCAGCAGGGCCTTTCGTGATTAACGATTTGTAT
GCCAGTGGTTATAGCGGCGATTTAACGGTGGAAATCCAAGAAAGTGATGGCAAAGTGCGGTCATTTATTGTGCCGTTTTC
TAATCTTGCCCCGTTAATGCGTGTGGGACACTTGCGTTATCAATTAGCTGGCGGACGTTATCGCATTGACAGCCGCACCT
TTGATGAACGGGTGTTACAAGGCGTGTTGCAATATGGTTTAACTAATCATCTCACGCTGAATTCAAGCCTGCTTTATACA
CGTCATTATCGTGCAGGGCTATTTGGTTTTGGTTTAAATACGCCGATTGGGGCGTTTTCTGCTGATGCCACTTGGTCGCA
CGCTGAATTTCCGCTAAAAAATGTGAGCAAAAACGGCTACAGCTTGCACGGCAGTTATAGTATTAACTTCAATGAAAGTG
GCACCAATATCACGTTGGCAGCCTATCGCTATTCTTCACGGGATTTTTACACCTTAAGCGACACCATTGGTCTTAACCGC
ACTTTCAGACAATTTAGCGGTGCGTATTTGCCTGAAATTTACCGCCCAAAAAATCAGTTTCAAGTGAGTTTAAGCCAAAG
TCTGGGGAATTGGGGAAATCTCTATCTTTCAGGACAAACCTATAATTATTGGGAAAAACGTGGCACGAATACGCAATATC
AAATAGCCTATTCAAACAGCTTCCACATTCTCAATTACTCTGTAAACCTCTCACAGAGTATTGATAAAGAAACGGGCAAA
CGTGACAACAGCATTTATTTGAGTCTCAGCCTGCCATTAGGTGATAACCATTCTGCAGATAGTGGTTATTCTCGCAGTGG
TAACGATATTAACCAACGACTTGGCGTAAATGGCTCTTTTGGCGAACGTCATCAATGGAGTTATGGCATTAACGCTTCAC
GTAATAATCAAGGCTATCGCAGTTATGACGCAAATCTTGCACATAACAATAGCATTGGTAGTTACCGTGCTTCTTATTCA
CGTGATAGCCTCAAAAATCGCTCCACCTCATTAGGCGCAAGCGGTGCTGTTGTGGCGCACAAACATGGTATTACCTTAAG
CCAACCTGTTGGCGAAAGTTTTGCCATTATTCACGCCAAAGATGCCGCAGGGGCAAAAGTGGAATCAGGTGCCAATGTGA
GCCTTGATTATTTCGGCAATGCGGTTATGCCTTACACCAGCCCGTATGAAATCAATTATATTGGTATCAATCCATCTGAT
GCGGAGGCGAATGTGGAATTTGAAGCTACTGAACGCCAAATTATTCCTCGTGCAAATTCCATTAGCTTAGTGGATTTCCG
CACGGGCAAAAACACAATGGTGTTATTTAACCTTACTTTGCCAAATGGCGAGCCAGTGCCAATGGCATCCACTGCACAAG
ATAGCAAAGGGGCATTTGTGGGCGATGTGGTGCAAGGGGGCGTGCTTTTCGCGAATAAACTTACCCAGCCAAAAGGCGAG
TTAATCGTCAAATGGGGTGAGCGAGAAAGCGAACAATGCCGTTTCCAATATCAAGTTGATTTGGATAACGCACAAATACA
AAGCCACGATATTCAATGTAAAACAGCAGAATAA

Upstream 100 bases:

>100_bases
GGGTAAGCCCACGTGGGACATAATCAAACAACTGTAAGATATTAGGAACGGTGTGCTAAAGCCTACGCTTGCACCCACTT
TACAATGAGAACTTTGATTC

Downstream 100 bases:

>100_bases
TTGAAGAGGATTTATGCAAAAAACACCCAAAAAATTAACCGCACTTTTCCATCAAAAATCCACCGCTACTTGTAGTGGAG
AAAATTATAGTGGAGCAAAT

Product: putative F17-like fimbrial usher

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 837; Mature: 837

Protein sequence:

>837_residues
MKTKIFPLNKIALACTLLLANPVAWAEDQFDASLWGEGSVLGIDFARFNVKNAVLPGRYEAQIYVNGEEKGESDIIFADN
PATGRAELCLTPKLQEILDLMDGAIVKSPATEEDACTFASEAIPQGTFDYQGGEMKLKLEIPQALTIRRPRGYIAPSRWQ
TGTNAAFANYDINYYRSSNPDVKSESLYVGLRSGVNLGNWALRHNGSFSRFKNHSSSGFTDKGKNHYERGDTYLQRDFAM
LRGNVTVGDFFSTARIGENFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDLY
ASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYT
RHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKNVSKNGYSLHGSYSINFNESGTNITLAAYRYSSRDFYTLSDTIGLNR
TFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQIAYSNSFHILNYSVNLSQSIDKETGK
RDNSIYLSLSLPLGDNHSADSGYSRSGNDINQRLGVNGSFGERHQWSYGINASRNNQGYRSYDANLAHNNSIGSYRASYS
RDSLKNRSTSLGASGAVVAHKHGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVMPYTSPYEINYIGINPSD
AEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSKGAFVGDVVQGGVLFANKLTQPKGE
LIVKWGERESEQCRFQYQVDLDNAQIQSHDIQCKTAE

Sequences:

>Translated_837_residues
MKTKIFPLNKIALACTLLLANPVAWAEDQFDASLWGEGSVLGIDFARFNVKNAVLPGRYEAQIYVNGEEKGESDIIFADN
PATGRAELCLTPKLQEILDLMDGAIVKSPATEEDACTFASEAIPQGTFDYQGGEMKLKLEIPQALTIRRPRGYIAPSRWQ
TGTNAAFANYDINYYRSSNPDVKSESLYVGLRSGVNLGNWALRHNGSFSRFKNHSSSGFTDKGKNHYERGDTYLQRDFAM
LRGNVTVGDFFSTARIGENFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDLY
ASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYT
RHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKNVSKNGYSLHGSYSINFNESGTNITLAAYRYSSRDFYTLSDTIGLNR
TFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQIAYSNSFHILNYSVNLSQSIDKETGK
RDNSIYLSLSLPLGDNHSADSGYSRSGNDINQRLGVNGSFGERHQWSYGINASRNNQGYRSYDANLAHNNSIGSYRASYS
RDSLKNRSTSLGASGAVVAHKHGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVMPYTSPYEINYIGINPSD
AEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSKGAFVGDVVQGGVLFANKLTQPKGE
LIVKWGERESEQCRFQYQVDLDNAQIQSHDIQCKTAE
>Mature_837_residues
MKTKIFPLNKIALACTLLLANPVAWAEDQFDASLWGEGSVLGIDFARFNVKNAVLPGRYEAQIYVNGEEKGESDIIFADN
PATGRAELCLTPKLQEILDLMDGAIVKSPATEEDACTFASEAIPQGTFDYQGGEMKLKLEIPQALTIRRPRGYIAPSRWQ
TGTNAAFANYDINYYRSSNPDVKSESLYVGLRSGVNLGNWALRHNGSFSRFKNHSSSGFTDKGKNHYERGDTYLQRDFAM
LRGNVTVGDFFSTARIGENFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDLY
ASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYT
RHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKNVSKNGYSLHGSYSINFNESGTNITLAAYRYSSRDFYTLSDTIGLNR
TFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQIAYSNSFHILNYSVNLSQSIDKETGK
RDNSIYLSLSLPLGDNHSADSGYSRSGNDINQRLGVNGSFGERHQWSYGINASRNNQGYRSYDANLAHNNSIGSYRASYS
RDSLKNRSTSLGASGAVVAHKHGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVMPYTSPYEINYIGINPSD
AEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSKGAFVGDVVQGGVLFANKLTQPKGE
LIVKWGERESEQCRFQYQVDLDNAQIQSHDIQCKTAE

Specific function: Essential for piliation [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=851, Percent_Identity=33.8425381903643, Blast_Score=433, Evalue=1e-122,
Organism=Escherichia coli, GI1790772, Length=851, Percent_Identity=31.6098707403055, Blast_Score=400, Evalue=1e-112,
Organism=Escherichia coli, GI1787172, Length=847, Percent_Identity=31.5230224321133, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1789533, Length=792, Percent_Identity=31.4393939393939, Blast_Score=363, Evalue=1e-101,
Organism=Escherichia coli, GI1788427, Length=857, Percent_Identity=29.8716452742124, Blast_Score=344, Evalue=1e-95,
Organism=Escherichia coli, GI1786744, Length=854, Percent_Identity=30.0936768149883, Blast_Score=333, Evalue=3e-92,
Organism=Escherichia coli, GI87081778, Length=836, Percent_Identity=26.1961722488038, Blast_Score=223, Evalue=5e-59,
Organism=Escherichia coli, GI1789610, Length=785, Percent_Identity=25.6050955414013, Blast_Score=173, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92496; Mature: 92496

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKIFPLNKIALACTLLLANPVAWAEDQFDASLWGEGSVLGIDFARFNVKNAVLPGRYE
CCCEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEEEEEECCCCCCCCEE
AQIYVNGEEKGESDIIFADNPATGRAELCLTPKLQEILDLMDGAIVKSPATEEDACTFAS
EEEEECCCCCCCCCEEEECCCCCCCEEEEECCCHHHHHHHHCCCEECCCCCCHHHHHHHH
EAIPQGTFDYQGGEMKLKLEIPQALTIRRPRGYIAPSRWQTGTNAAFANYDINYYRSSNP
HHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC
DVKSESLYVGLRSGVNLGNWALRHNGSFSRFKNHSSSGFTDKGKNHYERGDTYLQRDFAM
CCCCCEEEEEECCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
LRGNVTVGDFFSTARIGENFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQN
HCCCCEECCCHHHHHCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHCCCCCEEEEECC
GYTIYQITVPAGPFVINDLYASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRY
CEEEEEEEECCCCEEEEEHHHCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHCCEEE
QLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFS
EECCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCEEECCCCCCCCCCC
ADATWSHAEFPLKNVSKNGYSLHGSYSINFNESGTNITLAAYRYSSRDFYTLSDTIGLNR
CCCCCCCCCCCHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCH
TFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQIAYSNS
HHHHHCCCCCCHHHCCCCCEEEEEHHCCCCCCEEEECCCCCCHHHHCCCCCEEEEEECCC
FHILNYSVNLSQSIDKETGKRDNSIYLSLSLPLGDNHSADSGYSRSGNDINQRLGVNGSF
EEEEEEEEECHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
GERHQWSYGINASRNNQGYRSYDANLAHNNSIGSYRASYSRDSLKNRSTSLGASGAVVAH
CCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCEEEEE
KHGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVMPYTSPYEINYIGINPSD
ECCCEECCCCCCCEEEEEECCCCCCEECCCCCEEEHHCCCEECCCCCCEEEEEEECCCCC
AEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSKGAFV
CCCEEEEEECCCEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE
GDVVQGGVLFANKLTQPKGELIVKWGERESEQCRFQYQVDLDNAQIQSHDIQCKTAE
EHHHCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEECCCEEEEECC
>Mature Secondary Structure
MKTKIFPLNKIALACTLLLANPVAWAEDQFDASLWGEGSVLGIDFARFNVKNAVLPGRYE
CCCEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEEEEEECCCCCCCCEE
AQIYVNGEEKGESDIIFADNPATGRAELCLTPKLQEILDLMDGAIVKSPATEEDACTFAS
EEEEECCCCCCCCCEEEECCCCCCCEEEEECCCHHHHHHHHCCCEECCCCCCHHHHHHHH
EAIPQGTFDYQGGEMKLKLEIPQALTIRRPRGYIAPSRWQTGTNAAFANYDINYYRSSNP
HHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC
DVKSESLYVGLRSGVNLGNWALRHNGSFSRFKNHSSSGFTDKGKNHYERGDTYLQRDFAM
CCCCCEEEEEECCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
LRGNVTVGDFFSTARIGENFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQN
HCCCCEECCCHHHHHCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHCCCCCEEEEECC
GYTIYQITVPAGPFVINDLYASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRY
CEEEEEEEECCCCEEEEEHHHCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHCCEEE
QLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFS
EECCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCEEECCCCCCCCCCC
ADATWSHAEFPLKNVSKNGYSLHGSYSINFNESGTNITLAAYRYSSRDFYTLSDTIGLNR
CCCCCCCCCCCHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCH
TFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQIAYSNS
HHHHHCCCCCCHHHCCCCCEEEEEHHCCCCCCEEEECCCCCCHHHHCCCCCEEEEEECCC
FHILNYSVNLSQSIDKETGKRDNSIYLSLSLPLGDNHSADSGYSRSGNDINQRLGVNGSF
EEEEEEEEECHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
GERHQWSYGINASRNNQGYRSYDANLAHNNSIGSYRASYSRDSLKNRSTSLGASGAVVAH
CCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCEEEEE
KHGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVMPYTSPYEINYIGINPSD
ECCCEECCCCCCCEEEEEECCCCCCEECCCCCEEEHHCCCEECCCCCCEEEEEEECCCCC
AEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSKGAFV
CCCEEEEEECCCEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE
GDVVQGGVLFANKLTQPKGELIVKWGERESEQCRFQYQVDLDNAQIQSHDIQCKTAE
EHHHCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7905461 [H]