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The map label for this gene is ybeQ [C]

Identifier: 148828385

GI number: 148828385

Start: 1838579

End: 1839121

Strand: Direct

Name: ybeQ [C]

Synonym: CGSHiGG_09970

Alternate gene names: 148828385

Gene position: 1838579-1839121 (Clockwise)

Preceding gene: 148828382

Following gene: 148828387

Centisome position: 97.42

GC content: 38.49

Gene sequence:

>543_bases
ATGAAACTGAAGTTATTTTTTCATATAGTATTACTTTGTTTTAGTTTGCCTATTTGGGCAATGAAAACCGTTGATGTTAC
AGCGAGTCCGAAAATGGATGATCAAGCAAGAATGAATTTGGCACAAGAGTTTGCCAATAAACAACAATGGATCGACGTTT
TCAATATTATGTATCCAATGGCGTTAGAAGGAAATATAACGGCTCAAAGCAATCTAGGTATGTTATATAACCTTGGGCGT
GGCACGGTGAGAGACTATGAAAAGGCTTATTGGTGGTTTAGCGAAGCGGCAGAGAAGGGCAGTGTGAAAGGGCTAAATAA
CCTTGGCGTTATGTATCTACGTGGCGATTACGTCAAACAAAATACAGAGCAAGCCATTAAGCTTTTTGAACGTACAGCTC
GAGCTAAAGATACGGATGCGATGATGATGTTAAGTAATATTTATCGCTTACAAAACCAACCTGAAAAATCATTGGAATGG
CTGAAAAAAGCAGCTGAATTAGGCAATAAGGAAGCAAAACAGCGTTTATCTAGTCAGCCATAA

Upstream 100 bases:

>100_bases
TTATTTGCCCACTAAAAAGCTTTCTGTTATGCAAGTTGGACTAATCGAATTTGCGATTACTGCCGTGTTTTTTATTTTAC
TTTTAGTAGCAACCTTGTAA

Downstream 100 bases:

>100_bases
TCTAAAAGTGCGGTTATTTTAATCGCACAAATTTTACGCCACTATGTTGCAATAGCAATTTCATTGGATCTTCATCATTC
GAGACTGTTTTTTCACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKLKLFFHIVLLCFSLPIWAMKTVDVTASPKMDDQARMNLAQEFANKQQWIDVFNIMYPMALEGNITAQSNLGMLYNLGR
GTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTARAKDTDAMMMLSNIYRLQNQPEKSLEW
LKKAAELGNKEAKQRLSSQP

Sequences:

>Translated_180_residues
MKLKLFFHIVLLCFSLPIWAMKTVDVTASPKMDDQARMNLAQEFANKQQWIDVFNIMYPMALEGNITAQSNLGMLYNLGR
GTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTARAKDTDAMMMLSNIYRLQNQPEKSLEW
LKKAAELGNKEAKQRLSSQP
>Mature_180_residues
MKLKLFFHIVLLCFSLPIWAMKTVDVTASPKMDDQARMNLAQEFANKQQWIDVFNIMYPMALEGNITAQSNLGMLYNLGR
GTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTARAKDTDAMMMLSNIYRLQNQPEKSLEW
LKKAAELGNKEAKQRLSSQP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081769, Length=120, Percent_Identity=30, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 20772; Mature: 20772

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKLFFHIVLLCFSLPIWAMKTVDVTASPKMDDQARMNLAQEFANKQQWIDVFNIMYPM
CCHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQ
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHC
NTEQAIKLFERTARAKDTDAMMMLSNIYRLQNQPEKSLEWLKKAAELGNKEAKQRLSSQP
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MKLKLFFHIVLLCFSLPIWAMKTVDVTASPKMDDQARMNLAQEFANKQQWIDVFNIMYPM
CCHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQ
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHC
NTEQAIKLFERTARAKDTDAMMMLSNIYRLQNQPEKSLEWLKKAAELGNKEAKQRLSSQP
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]