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The map label for this gene is lysS

Identifier: 148828363

GI number: 148828363

Start: 1811480

End: 1812133

Strand: Direct

Name: lysS

Synonym: CGSHiGG_09805

Alternate gene names: NA

Gene position: 1811480-1812133 (Clockwise)

Preceding gene: 148828362

Following gene: 148828364

Centisome position: 95.99

GC content: 34.56

Gene sequence:

>654_bases
ATGAAATTAAAAGGGCTGTTGGCATTTTGTTTGCTTTTTTTATCGTCGTTTGTTTTAGCAGAAGTCAATCAGAAAGAATT
TTCAGTACAAAAATCTCCGCACTTGCCATCACGGGACACAATTTATTTTGAAGATGGACGCGATTATTTTTCTTATCAAG
AACCTATTGAACAAGCGTCTCGAGCCGATAAAAAAATACGGATTCAATTCTTTTTTGATTATGATTGTCGAGTATGTTCT
TCAGCACAGGATATTTTAGAACTTTATAGCCAAATACGCACATATAAAGTTGTGTTGGAACAATATCCTATTGCAACTGC
CGATAGCCAGTTTAGCGCACGCATTTTTTATACTTTGCAAGCATTAAGTGCGGTGGAATTATCTAATGTTTTATTATTTG
AAACTTCAGAAAAATCCCGTTATACAGAATTGTCTACATCAAATAAAATTCAGCAATGGGCGGAAGAACAAGGGCTAGAT
AAACAGTTATTTATTCAAACTGAAAATTCACAAAGCGTAAAAGAACAAATTCAAGATGCGATTGAATTGACGGAAGAATA
TGGTGTTTTTACCTATCCTTACGTTGTTATTGGGGAAAATATGTACTCACTGCGAGTACGCTTTATAACGATGATTATAG
CGTTGCAGTGTTAG

Upstream 100 bases:

>100_bases
CAGGCTCGTTTAGCCTATAAATTAGATATTAACGAATTTCGTGGCAATCGTAGCGTACAATTATTGGTAGATTATATTGA
GCCTATAGATGAGTGATAGA

Downstream 100 bases:

>100_bases
ATTTTTTGGTAAATAAAATAGAACAGGAACAAAAACAATGAAAATCGGAATTGTTGGTGCAATGGCACAAGAAGTCGAAA
TTTTAAAAAATTTAATGGCT

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKLKGLLAFCLLFLSSFVLAEVNQKEFSVQKSPHLPSRDTIYFEDGRDYFSYQEPIEQASRADKKIRIQFFFDYDCRVCS
SAQDILELYSQIRTYKVVLEQYPIATADSQFSARIFYTLQALSAVELSNVLLFETSEKSRYTELSTSNKIQQWAEEQGLD
KQLFIQTENSQSVKEQIQDAIELTEEYGVFTYPYVVIGENMYSLRVRFITMIIALQC

Sequences:

>Translated_217_residues
MKLKGLLAFCLLFLSSFVLAEVNQKEFSVQKSPHLPSRDTIYFEDGRDYFSYQEPIEQASRADKKIRIQFFFDYDCRVCS
SAQDILELYSQIRTYKVVLEQYPIATADSQFSARIFYTLQALSAVELSNVLLFETSEKSRYTELSTSNKIQQWAEEQGLD
KQLFIQTENSQSVKEQIQDAIELTEEYGVFTYPYVVIGENMYSLRVRFITMIIALQC
>Mature_217_residues
MKLKGLLAFCLLFLSSFVLAEVNQKEFSVQKSPHLPSRDTIYFEDGRDYFSYQEPIEQASRADKKIRIQFFFDYDCRVCS
SAQDILELYSQIRTYKVVLEQYPIATADSQFSARIFYTLQALSAVELSNVLLFETSEKSRYTELSTSNKIQQWAEEQGLD
KQLFIQTENSQSVKEQIQDAIELTEEYGVFTYPYVVIGENMYSLRVRFITMIIALQC

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25282; Mature: 25282

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKGLLAFCLLFLSSFVLAEVNQKEFSVQKSPHLPSRDTIYFEDGRDYFSYQEPIEQAS
CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
RADKKIRIQFFFDYDCRVCSSAQDILELYSQIRTYKVVLEQYPIATADSQFSARIFYTLQ
CCCCEEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ALSAVELSNVLLFETSEKSRYTELSTSNKIQQWAEEQGLDKQLFIQTENSQSVKEQIQDA
HHHHHHHCCEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
IELTEEYGVFTYPYVVIGENMYSLRVRFITMIIALQC
HHHHHHCCCEECCEEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLKGLLAFCLLFLSSFVLAEVNQKEFSVQKSPHLPSRDTIYFEDGRDYFSYQEPIEQAS
CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
RADKKIRIQFFFDYDCRVCSSAQDILELYSQIRTYKVVLEQYPIATADSQFSARIFYTLQ
CCCCEEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ALSAVELSNVLLFETSEKSRYTELSTSNKIQQWAEEQGLDKQLFIQTENSQSVKEQIQDA
HHHHHHHCCEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH
IELTEEYGVFTYPYVVIGENMYSLRVRFITMIIALQC
HHHHHHCCCEECCEEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]