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The map label for this gene is yfcN [C]

Identifier: 148828352

GI number: 148828352

Start: 1796494

End: 1796997

Strand: Direct

Name: yfcN [C]

Synonym: CGSHiGG_09730

Alternate gene names: 148828352

Gene position: 1796494-1796997 (Clockwise)

Preceding gene: 148828350

Following gene: 148828355

Centisome position: 95.19

GC content: 38.89

Gene sequence:

>504_bases
ATGCAAGACGAATTTGATTTATTCCGAGCGGAAACCAAAGGCATTAAGCCAATTAAACAAGATACTTTTGTTGCCCCCCG
TCAAAAACGTGATCAGAAAAAAATAGAATTGAAAGAATTACGAGTGAAAGAAGATACATTGTTCTATTTTTCTGATGAAT
ATGAGCCATTACTGAATGACAATGATGGTGTTGTGAAATATTTACGTGATGGGGAAGATTCCCATTTATTAAAACAACTT
CGTCGTGGCGATTTTTCGCCAGAATTGTTTTTAGATTTACACGGTTTAACCCGTGAACAAGCTAAGCAAGAATTAGCCGC
GCTTTTACTGGCTTGTGAAAATGAGCATGTAGATTGTGCCAGTATCATGACGGGCTATGGCACCTTTACATTGAAAAAAC
AAATTCCACGTTGGCTAGTACAACATCCTAAAGTGCGGGCATTACATCAAGCACCAAGGGAATGGGGCGGTGAAGCCGCA
ATTTTGATTTTGGTCGATTTGTAA

Upstream 100 bases:

>100_bases
TTAGCATAAAATTAGGTATGAAAATTTGGCGTAGTTATACCACAGATGAGAATGTAGAACTATGATATGATACGCAAAAT
TTGAAATTAATGAGAAAAAA

Downstream 100 bases:

>100_bases
AAAAACGTTATAAAAAATACCGCACTTTTATTGCCTAGGGCAAAGTGCGGTATTTTCTTTTATATTTTTACTTGAATTAT
TGTGTTGCTTGAATTGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MQDEFDLFRAETKGIKPIKQDTFVAPRQKRDQKKIELKELRVKEDTLFYFSDEYEPLLNDNDGVVKYLRDGEDSHLLKQL
RRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAA
ILILVDL

Sequences:

>Translated_167_residues
MQDEFDLFRAETKGIKPIKQDTFVAPRQKRDQKKIELKELRVKEDTLFYFSDEYEPLLNDNDGVVKYLRDGEDSHLLKQL
RRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAA
ILILVDL
>Mature_167_residues
MQDEFDLFRAETKGIKPIKQDTFVAPRQKRDQKKIELKELRVKEDTLFYFSDEYEPLLNDNDGVVKYLRDGEDSHLLKQL
RRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAA
ILILVDL

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=162, Percent_Identity=53.0864197530864, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 19391; Mature: 19391

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDEFDLFRAETKGIKPIKQDTFVAPRQKRDQKKIELKELRVKEDTLFYFSDEYEPLLND
CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCC
NDGVVKYLRDGEDSHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCA
CCCEEHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHH
SIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAAILILVDL
HHHHCCCCEEHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEEEEEC
>Mature Secondary Structure
MQDEFDLFRAETKGIKPIKQDTFVAPRQKRDQKKIELKELRVKEDTLFYFSDEYEPLLND
CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCC
NDGVVKYLRDGEDSHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCA
CCCEEHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHH
SIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAAILILVDL
HHHHCCCCEEHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]