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The map label for this gene is opa [H]

Identifier: 148828328

GI number: 148828328

Start: 1772386

End: 1772898

Strand: Direct

Name: opa [H]

Synonym: CGSHiGG_09570

Alternate gene names: 148828328

Gene position: 1772386-1772898 (Clockwise)

Preceding gene: 148828327

Following gene: 148828335

Centisome position: 93.92

GC content: 37.43

Gene sequence:

>513_bases
ATGAAAAAATCTTTATTAGCAGTTATTGTTGGTGCATTTGCCTTTGCTTCTGTTGCAAATGCGAATATTTATGCTGAGGG
CGATATCGGTTTATCTCAAACTAAAGCAAACGGTAGTAGCAATACAAGAGTTGAACCTCGCGTATCCGTGGGTTATAAAG
TAGGAAATACACGTGTTGCGGGTGATTATACTCATCATGGAAAAGTTGATGGCACAAAAATTCAAGGTTTAGGTGCATCA
GTATTATATGATTTTGACACGAATTCTAAAGTGCAACCTTATGTTGGTGCTCGTGTAGCGACTAATCAATTTAAATACAC
CAATCGAGCAGAACAAAAGTTTAAAAGTTCTTCTGATATTAAGCTCGGATATGGGGTTGTAGCAGGTGCAAAATATAAGT
TAGATGGCAACTGGTACGCAAATGGTGGAGTTGAGTACAATCGTTTAGGTAATTTTGATAGTACCAAAGTTAATAACTAT
GGTGCAAAAGTTGGTGTGGGGTACGGATTCTAA

Upstream 100 bases:

>100_bases
TGTGTAAAAAATGTAGGGGAAAATTAGTTTTTGTCGATGATGAAGAATAATTTTTGTGATATATTTTTCCAATTTATTCA
ATAAATAAAGGAGTTATCCA

Downstream 100 bases:

>100_bases
TTTTTAGAATACAAAAATCTTTTTTATAAAACACTTTAATTTAACGGTGATCGTTTAAAACAATCACCGTTATTTATTTT
GGGATTATTTCAATACGCTA

Product: opacity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKSLLAVIVGAFAFASVANANIYAEGDIGLSQTKANGSSNTRVEPRVSVGYKVGNTRVAGDYTHHGKVDGTKIQGLGAS
VLYDFDTNSKVQPYVGARVATNQFKYTNRAEQKFKSSSDIKLGYGVVAGAKYKLDGNWYANGGVEYNRLGNFDSTKVNNY
GAKVGVGYGF

Sequences:

>Translated_170_residues
MKKSLLAVIVGAFAFASVANANIYAEGDIGLSQTKANGSSNTRVEPRVSVGYKVGNTRVAGDYTHHGKVDGTKIQGLGAS
VLYDFDTNSKVQPYVGARVATNQFKYTNRAEQKFKSSSDIKLGYGVVAGAKYKLDGNWYANGGVEYNRLGNFDSTKVNNY
GAKVGVGYGF
>Mature_170_residues
MKKSLLAVIVGAFAFASVANANIYAEGDIGLSQTKANGSSNTRVEPRVSVGYKVGNTRVAGDYTHHGKVDGTKIQGLGAS
VLYDFDTNSKVQPYVGARVATNQFKYTNRAEQKFKSSSDIKLGYGVVAGAKYKLDGNWYANGGVEYNRLGNFDSTKVNNY
GAKVGVGYGF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR003394 [H]

Pfam domain/function: PF02462 Opacity [H]

EC number: NA

Molecular weight: Translated: 18157; Mature: 18157

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLAVIVGAFAFASVANANIYAEGDIGLSQTKANGSSNTRVEPRVSVGYKVGNTRVA
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEECCEEEEEEEECCEEEE
GDYTHHGKVDGTKIQGLGASVLYDFDTNSKVQPYVGARVATNQFKYTNRAEQKFKSSSDI
CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEEECCEEECCCHHHHHHCCCCCE
KLGYGVVAGAKYKLDGNWYANGGVEYNRLGNFDSTKVNNYGAKVGVGYGF
EEEEEEEECEEEEECCCEEECCCEEEECCCCCCCCEECCCCCEEEECCCC
>Mature Secondary Structure
MKKSLLAVIVGAFAFASVANANIYAEGDIGLSQTKANGSSNTRVEPRVSVGYKVGNTRVA
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEECCEEEEEEEECCEEEE
GDYTHHGKVDGTKIQGLGASVLYDFDTNSKVQPYVGARVATNQFKYTNRAEQKFKSSSDI
CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEEECCEEECCCHHHHHHCCCCCE
KLGYGVVAGAKYKLDGNWYANGGVEYNRLGNFDSTKVNNYGAKVGVGYGF
EEEEEEEECEEEEECCCEEECCCEEEECCCCCCCCEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]