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The map label for this gene is oppB [H]

Identifier: 148828283

GI number: 148828283

Start: 1718067

End: 1718909

Strand: Reverse

Name: oppB [H]

Synonym: CGSHiGG_09275

Alternate gene names: 148828283

Gene position: 1718909-1718067 (Counterclockwise)

Preceding gene: 148828284

Following gene: 148828282

Centisome position: 91.08

GC content: 41.87

Gene sequence:

>843_bases
ATGCGTCTTGCCCCTGGCAGCCCGTTCACTTCTGAACGCGCTTATCCGCCAGAAGTCATGGCTAATATCGAAGCGAAGTA
TCATTTAAATGAACCATTATATAAACAATATTTCCTTTATTTAGAAAATCTTTCCAAAGGAGATTTTGGTCCCTCTTTTA
AATATAAAGACCAATCAGTCAATGATTTAATCGCGTCAGCTTTCCCTGTTTCCATAAAATTGGGCATGGTGGCCTTCGCC
TTTGCAGTCGTGCTAGGAGTAACAGCAGGTACGCTCGCCGCTCTGAATCAAAATAGCCGTTGGGATTATATTTTGATGAG
TTTCTCAATGCTTGGGGTCATTATGCCAAGCTTCGTATTTGCACCTATTTTAGTGCTAATTTTCGCCATTTATCTAGGAT
GGCTGCCAGCTGGCGGTTGGAACGGCGGTACCGCCATATACATGATCTTACCTGTAGCCTCCTTAACTATCGCTTATGTT
GCAGGGATTGCGCGTATCATGCGTGGTTCGATGATTGAAGTGTTACATTCCAACTTTATTCGAACCGCCAAAGCTAAAGG
ACTTTCCATGTCGAGAATCATTTTAAAACATGCTTTGCGTCCCGCACTTTTACCCGTGATAACCTATTTAGGACCTGCTT
TCGTAGGGATTATTACCGGCTCAATGGTCATCGAAAGCGTATTTGGTTTACCTGGCATGGGATTATTATTTGTAAACGGC
GCATTGAACCGCGATTACTCTTTAGTTTTGAGCCTCACCATTTTAGTGGGGACATTAACCATTTTATTTAATGCGATTGT
GGATATTTTATACGCCATCATCGATCCAAAAATTCGTTATTAA

Upstream 100 bases:

>100_bases
CCCATTTTGGTTGGAGTTGTTATGCTCAAGTTTATTTTTAAACGGCTGTTGGAAGCCTTGCCGACGCTGTTTATTTTAAT
TACTTTTTCTTTCTTTTTTG

Downstream 100 bases:

>100_bases
GGATAAGTTATGACAGATTATCGTACTCAGCCGATTAATCAGAAAAATGCGGATTTTGTGGAACAAGTGGCTGACCGTAT
TGAAGAAATGCAACTGGAAG

Product: oligopeptide transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRLAPGSPFTSERAYPPEVMANIEAKYHLNEPLYKQYFLYLENLSKGDFGPSFKYKDQSVNDLIASAFPVSIKLGMVAFA
FAVVLGVTAGTLAALNQNSRWDYILMSFSMLGVIMPSFVFAPILVLIFAIYLGWLPAGGWNGGTAIYMILPVASLTIAYV
AGIARIMRGSMIEVLHSNFIRTAKAKGLSMSRIILKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGMGLLFVNG
ALNRDYSLVLSLTILVGTLTILFNAIVDILYAIIDPKIRY

Sequences:

>Translated_280_residues
MRLAPGSPFTSERAYPPEVMANIEAKYHLNEPLYKQYFLYLENLSKGDFGPSFKYKDQSVNDLIASAFPVSIKLGMVAFA
FAVVLGVTAGTLAALNQNSRWDYILMSFSMLGVIMPSFVFAPILVLIFAIYLGWLPAGGWNGGTAIYMILPVASLTIAYV
AGIARIMRGSMIEVLHSNFIRTAKAKGLSMSRIILKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGMGLLFVNG
ALNRDYSLVLSLTILVGTLTILFNAIVDILYAIIDPKIRY
>Mature_280_residues
MRLAPGSPFTSERAYPPEVMANIEAKYHLNEPLYKQYFLYLENLSKGDFGPSFKYKDQSVNDLIASAFPVSIKLGMVAFA
FAVVLGVTAGTLAALNQNSRWDYILMSFSMLGVIMPSFVFAPILVLIFAIYLGWLPAGGWNGGTAIYMILPVASLTIAYV
AGIARIMRGSMIEVLHSNFIRTAKAKGLSMSRIILKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGMGLLFVNG
ALNRDYSLVLSLTILVGTLTILFNAIVDILYAIIDPKIRY

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=280, Percent_Identity=75.3571428571429, Blast_Score=444, Evalue=1e-126,
Organism=Escherichia coli, GI1787053, Length=264, Percent_Identity=38.2575757575758, Blast_Score=182, Evalue=1e-47,
Organism=Escherichia coli, GI1789965, Length=311, Percent_Identity=31.8327974276527, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1789888, Length=263, Percent_Identity=34.2205323193916, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=31.1355311355311, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788504, Length=290, Percent_Identity=30.3448275862069, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1787761, Length=307, Percent_Identity=30.6188925081433, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30542; Mature: 30542

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAPGSPFTSERAYPPEVMANIEAKYHLNEPLYKQYFLYLENLSKGDFGPSFKYKDQSV
CCCCCCCCCCCCCCCCHHHHHCCCHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
NDLIASAFPVSIKLGMVAFAFAVVLGVTAGTLAALNQNSRWDYILMSFSMLGVIMPSFVF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
APILVLIFAIYLGWLPAGGWNGGTAIYMILPVASLTIAYVAGIARIMRGSMIEVLHSNFI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAKAKGLSMSRIILKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGMGLLFVNG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECC
ALNRDYSLVLSLTILVGTLTILFNAIVDILYAIIDPKIRY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRLAPGSPFTSERAYPPEVMANIEAKYHLNEPLYKQYFLYLENLSKGDFGPSFKYKDQSV
CCCCCCCCCCCCCCCCHHHHHCCCHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
NDLIASAFPVSIKLGMVAFAFAVVLGVTAGTLAALNQNSRWDYILMSFSMLGVIMPSFVF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
APILVLIFAIYLGWLPAGGWNGGTAIYMILPVASLTIAYVAGIARIMRGSMIEVLHSNFI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAKAKGLSMSRIILKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGMGLLFVNG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECC
ALNRDYSLVLSLTILVGTLTILFNAIVDILYAIIDPKIRY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]