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The map label for this gene is rfaF [H]

Identifier: 148828267

GI number: 148828267

Start: 1697590

End: 1698540

Strand: Reverse

Name: rfaF [H]

Synonym: CGSHiGG_09175

Alternate gene names: 148828267

Gene position: 1698540-1697590 (Counterclockwise)

Preceding gene: 148828268

Following gene: 148828263

Centisome position: 90.0

GC content: 41.75

Gene sequence:

>951_bases
ATGAATATTCTAATTATTGGCCCATCTTGGGTTGGCGATATGATGATGTCGCACAGTTTGTACCAGCAACTGAAAATTCA
ATATCCAAACTGCAATATTGATGTGATGGCACCGAATTGGTGTAAGCCTTTGCTTGCGCGAATGCCAGAGGTGCGTAAGG
CGATTGAAATGCCATTAGGGCACGGAGCCTTTGAATTGGGAACGCGTTATCGTTTAGGAAAGTCTTTGCGTGAACAATAT
GATATGGCGATTGTTTTGCCTAATTCATTGAAATCGGCGTTTATTCCTTTCTTTGCAAAGATTATCCATCGTCGCGGTTG
GAAAGGTGAAAGCCGTTATATTTTATTGAATGATTTACGAGCCAATAAAAAAGATTATCCAATGATGGTGCAGCGTTATG
TTGCATTGGCTTTTGAAAAAGATGCTGTACCAAAAGCTGATGATATTCCTGTCTTGAAACCCTATTTGACGGTTGAGCCA
GCGCAACAAGCTGAAACCTTAAAAAAATTTGAAAAACAAACCGCACTTTTAGGCGAGCGTCCAATTATTGGTTTTTGTCC
TGGTGCGGAATTTGGCCCAGCAAAACGTTGGCCACACTATCATTATGCAAAATTAGCAGAAATGTTAATTACCCAAGGCT
ATGCTGTGGCGCTATTTGGTTCTGCTAAAGATGAACCAGTGGGCGAAGAAATTCGTCAAGCACTGCCAGAAGCGTTGCGT
GAGTTTTGTGTCAATTTAGCAGGAAAAACCAACTTGAATGAAGCGGTGGATTTAATTGCAAATTGTACGGCAGTCGTGAC
CAATGACAGTGGTTTAATGCATATTGCGGCAGCAGTCAATCGTCCATTGATTGCACTTTATGGCCCAACTAGCCCGCAAT
ATACGCCACCGCTTTCGGATAAGGCAACGATTATTCGTTTAATTGAAGGCGGATTAATTAAAAGTCCGTAA

Upstream 100 bases:

>100_bases
TAAAGAGTTTCGACTAAATTGTTAAAGGAGCATATTTTTATTCAACTCTGTGCCATAATAACAAGTATTTTTGACCGCAC
TTTTATCTGAAAGACAGAAA

Downstream 100 bases:

>100_bases
AGGCGACAAAGAGGGCGGTTATCATCAAAGTTTGATTGATATTACGCCAGAAATGGCATTAGAAAAATTGAACGAACTGT
TGGCAAAATAATGAAAGTTT

Product: ADP-heptose-LPS heptosyltransferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNILIIGPSWVGDMMMSHSLYQQLKIQYPNCNIDVMAPNWCKPLLARMPEVRKAIEMPLGHGAFELGTRYRLGKSLREQY
DMAIVLPNSLKSAFIPFFAKIIHRRGWKGESRYILLNDLRANKKDYPMMVQRYVALAFEKDAVPKADDIPVLKPYLTVEP
AQQAETLKKFEKQTALLGERPIIGFCPGAEFGPAKRWPHYHYAKLAEMLITQGYAVALFGSAKDEPVGEEIRQALPEALR
EFCVNLAGKTNLNEAVDLIANCTAVVTNDSGLMHIAAAVNRPLIALYGPTSPQYTPPLSDKATIIRLIEGGLIKSP

Sequences:

>Translated_316_residues
MNILIIGPSWVGDMMMSHSLYQQLKIQYPNCNIDVMAPNWCKPLLARMPEVRKAIEMPLGHGAFELGTRYRLGKSLREQY
DMAIVLPNSLKSAFIPFFAKIIHRRGWKGESRYILLNDLRANKKDYPMMVQRYVALAFEKDAVPKADDIPVLKPYLTVEP
AQQAETLKKFEKQTALLGERPIIGFCPGAEFGPAKRWPHYHYAKLAEMLITQGYAVALFGSAKDEPVGEEIRQALPEALR
EFCVNLAGKTNLNEAVDLIANCTAVVTNDSGLMHIAAAVNRPLIALYGPTSPQYTPPLSDKATIIRLIEGGLIKSP
>Mature_316_residues
MNILIIGPSWVGDMMMSHSLYQQLKIQYPNCNIDVMAPNWCKPLLARMPEVRKAIEMPLGHGAFELGTRYRLGKSLREQY
DMAIVLPNSLKSAFIPFFAKIIHRRGWKGESRYILLNDLRANKKDYPMMVQRYVALAFEKDAVPKADDIPVLKPYLTVEP
AQQAETLKKFEKQTALLGERPIIGFCPGAEFGPAKRWPHYHYAKLAEMLITQGYAVALFGSAKDEPVGEEIRQALPEALR
EFCVNLAGKTNLNEAVDLIANCTAVVTNDSGLMHIAAAVNRPLIALYGPTSPQYTPPLSDKATIIRLIEGGLIKSP

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=314, Percent_Identity=62.4203821656051, Blast_Score=399, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 35295; Mature: 35295

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIIGPSWVGDMMMSHSLYQQLKIQYPNCNIDVMAPNWCKPLLARMPEVRKAIEMPLG
CEEEEECCHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHCHHHHHHHHCCCC
HGAFELGTRYRLGKSLREQYDMAIVLPNSLKSAFIPFFAKIIHRRGWKGESRYILLNDLR
CCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
ANKKDYPMMVQRYVALAFEKDAVPKADDIPVLKPYLTVEPAQQAETLKKFEKQTALLGER
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
PIIGFCPGAEFGPAKRWPHYHYAKLAEMLITQGYAVALFGSAKDEPVGEEIRQALPEALR
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH
EFCVNLAGKTNLNEAVDLIANCTAVVTNDSGLMHIAAAVNRPLIALYGPTSPQYTPPLSD
HHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCEEEEHHHCCCEEEEECCCCCCCCCCCCC
KATIIRLIEGGLIKSP
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNILIIGPSWVGDMMMSHSLYQQLKIQYPNCNIDVMAPNWCKPLLARMPEVRKAIEMPLG
CEEEEECCHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHCHHHHHHHHCCCC
HGAFELGTRYRLGKSLREQYDMAIVLPNSLKSAFIPFFAKIIHRRGWKGESRYILLNDLR
CCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
ANKKDYPMMVQRYVALAFEKDAVPKADDIPVLKPYLTVEPAQQAETLKKFEKQTALLGER
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
PIIGFCPGAEFGPAKRWPHYHYAKLAEMLITQGYAVALFGSAKDEPVGEEIRQALPEALR
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH
EFCVNLAGKTNLNEAVDLIANCTAVVTNDSGLMHIAAAVNRPLIALYGPTSPQYTPPLSD
HHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCEEEEHHHCCCEEEEECCCCCCCCCCCCC
KATIIRLIEGGLIKSP
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]