| Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
|---|---|
| Accession | NC_009567 |
| Length | 1,887,192 |
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The map label for this gene is yhdJ [C]
Identifier: 148828222
GI number: 148828222
Start: 1651148
End: 1653322
Strand: Reverse
Name: yhdJ [C]
Synonym: CGSHiGG_08920
Alternate gene names: 148828222
Gene position: 1653322-1651148 (Counterclockwise)
Preceding gene: 148828223
Following gene: 148828221
Centisome position: 87.61
GC content: 35.59
Gene sequence:
>2175_bases ATGAAGACAGACATTCAAACCGAATTAACCCAAGCCCTGCGATCACTCGAAAAAGTATGGGCAAACGAAGAAAAAACCAT TTTAGCCAAAAACATTCTATTGGATTTGGTGGAAAAAACCGACCCGACTATTATCGGGTTGTTATTGGGGAATGATGAGT TAAAACGCCATTTTTTTGTGGAAGTGAATGGTGTTTTGGTGTTTAAATTGCAGGATTTTCGTTTTTTCTTGGACAAACAC CGCATCAATAATTCCTACACAAAATACGCCAATCGCATTGGCTTGACGGACGGCAACCGCTTTTTGAAAGACAGTTCGGA TATTGTGTTGGATTTTCCGTTTAAAGATTGTGTGTTAAATGGCGGACAAAGCACCGAAGAAGGAGAGGAAATTTATTTTA AACGCAATAATGACCAGTCAGATAGTCAGTTATACAAAAAAGAAAAGCGAAAAAGACAAGAAATATTTTTTAATCAAACC CTTGCTTTTGATGAAATTGACCGACTTTTTGACGCAAAAGCATTCTCAAAATTCTCTCGCTATACCGCAGACGGCAAACA AGCCGTTGGCGAAATCAAACGCCGTTCAGACGGCACACCCGCCGAAAACCTTATTATCAAAGGCAATAATCTGATTGCCC TGCATTCGCTTGCCAAGCAGTTTAAAGGTAAAGTTAAGCTGATTTATATTGATCCGCCATATAACACGGGCAATGACGGT TTCAAATACAACGACAAATTTAATCATTCCACTTGGCTGACTTTTATGAAAAATCGGCTGGAAATTGCGAAAAAATTGTT GGCTGATGATGGTGTGATTTTTGTTCAATGTGATGATAATGAACAGGCTTATTTGAAGATATTAATGGATGAGATTTTTG AGCGTGAAAATTTCATTAATACGATTATTCCTGAAATGAGCAATGCTTCTGGGAATAAAATTAAACACGCTATTAAAGGG AAGAAATTTCCTAAACTAAAAGAATACATCCTTTTATATGCTAAAGATAAAAATCAGATTAATTTAACTATCCCCAAACA GGCAAAAGAAAAATGGGATAAAGAATACAATCAAATTATTCCTGAATTAACTCTCCAAAGTTTTGAAAGAATTATTGAAT TAATTGATGATAAAAAAATAAACGAATTGGACAAAATGCTTACTGGACTATCTTTGGTTTCACTATCAGAGTTTATTAAA TCAAATGAAAAAGTTATTATTGATGAATGGGTATCTAGTCATTTGTCAGTTATATCAGAGAATAAATTAACTGCAGAACA AATTAGCGAACAAGCTATTTCTGACTGGAAATGGAATAATGCTTATCGAATTGTCGCATCTAAACCAAATAAAGCATTGA GAAAAAAAGCTCTTAAATTAGATTTTAAACAGCCTATTCAGTCTCTTACCAATCCTAGTGGCGATATAAAAATTATTTTA ACGGATTTTAACCGAGAAACTGAAACCGCCAGAATTGAATTGGCATTTGCAGAAATAAATTCATCTATATATATTGGCGA TATTTGGTTTAAAATTACTACCACAGGTGGGGTTGCTCAAGAAGGGGGAGTTAATTTTACAAATGGTAAAAAACCTGAAC AACTGTTAAAAATCATTTTAGATTGTGCGACAAAAAAGGGGGACATCATCCTAGACTTCCATCTAGGCTCTGGCACAACC GCCGCTGTTGCCCATAAAATGAACCGTCAATATATCGGTATTGAACAAATGGATTATATTAAAACGCTTGCCGTTGAACG CCTGAAAAAAGTGATTGATGGCGAGCAAGGCGGTATTTCCAAAGCCGTAAACTGGAAAGACGGTGGCGAGTTTGTTTATG CCGAACTTGCCCCATTTAACGAAAGCGCAAAACAACAGATTTTGGCTTGTGGAAATTCAGACGACATCAAAACACTGTTT AATGAATTATGCGAACGCTATTTCTTAAAATATAATGTAAGCGTGAATGAATTTAGTCAAATCATTGAAGAGCCTGAATT TCAATCTTTGCCATTAGACGAACAAAAACAAATGGTGCTTGAAATGTTGGATTTAAATCAGATGTATGTTTCATTATCTG AAATGGACGATGAACAATTTGCAGGCTGCTTAAACGATGACGATAAAGCGTTAAGCCGTGCGTTCTATCAAGCGGAGAAA AAAGATGGCGAATAA
Upstream 100 bases:
>100_bases AGAGAGTAATTAAACCTGTACGGTCGATAAATATACCTAAACACTCTGCTATTCCTTTGTAATAGCACATTAAAATAATG ACTTATGAGGATTGATAACG
Downstream 100 bases:
>100_bases TAAAACGTTGTTTGATTGGGTGGAAGACCGCAAATCAACCCTAGAAGAAATGGAGCAGACGGATTTTTTCGCACTGCCTG AATTTGTAGAACGCAATTTA
Product: twin-argninine leader-binding protein DmsD
Products: NA
Alternate protein names: M.HindVIP; HindVIP methyltransferase [H]
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MKTDIQTELTQALRSLEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLGNDELKRHFFVEVNGVLVFKLQDFRFFLDKH RINNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNDQSDSQLYKKEKRKRQEIFFNQT LAFDEIDRLFDAKAFSKFSRYTADGKQAVGEIKRRSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYNTGNDG FKYNDKFNHSTWLTFMKNRLEIAKKLLADDGVIFVQCDDNEQAYLKILMDEIFERENFINTIIPEMSNASGNKIKHAIKG KKFPKLKEYILLYAKDKNQINLTIPKQAKEKWDKEYNQIIPELTLQSFERIIELIDDKKINELDKMLTGLSLVSLSEFIK SNEKVIIDEWVSSHLSVISENKLTAEQISEQAISDWKWNNAYRIVASKPNKALRKKALKLDFKQPIQSLTNPSGDIKIIL TDFNRETETARIELAFAEINSSIYIGDIWFKITTTGGVAQEGGVNFTNGKKPEQLLKIILDCATKKGDIILDFHLGSGTT AAVAHKMNRQYIGIEQMDYIKTLAVERLKKVIDGEQGGISKAVNWKDGGEFVYAELAPFNESAKQQILACGNSDDIKTLF NELCERYFLKYNVSVNEFSQIIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEK KDGE
Sequences:
>Translated_724_residues MKTDIQTELTQALRSLEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLGNDELKRHFFVEVNGVLVFKLQDFRFFLDKH RINNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNDQSDSQLYKKEKRKRQEIFFNQT LAFDEIDRLFDAKAFSKFSRYTADGKQAVGEIKRRSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYNTGNDG FKYNDKFNHSTWLTFMKNRLEIAKKLLADDGVIFVQCDDNEQAYLKILMDEIFERENFINTIIPEMSNASGNKIKHAIKG KKFPKLKEYILLYAKDKNQINLTIPKQAKEKWDKEYNQIIPELTLQSFERIIELIDDKKINELDKMLTGLSLVSLSEFIK SNEKVIIDEWVSSHLSVISENKLTAEQISEQAISDWKWNNAYRIVASKPNKALRKKALKLDFKQPIQSLTNPSGDIKIIL TDFNRETETARIELAFAEINSSIYIGDIWFKITTTGGVAQEGGVNFTNGKKPEQLLKIILDCATKKGDIILDFHLGSGTT AAVAHKMNRQYIGIEQMDYIKTLAVERLKKVIDGEQGGISKAVNWKDGGEFVYAELAPFNESAKQQILACGNSDDIKTLF NELCERYFLKYNVSVNEFSQIIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEK KDGE >Mature_724_residues MKTDIQTELTQALRSLEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLGNDELKRHFFVEVNGVLVFKLQDFRFFLDKH RINNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNDQSDSQLYKKEKRKRQEIFFNQT LAFDEIDRLFDAKAFSKFSRYTADGKQAVGEIKRRSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYNTGNDG FKYNDKFNHSTWLTFMKNRLEIAKKLLADDGVIFVQCDDNEQAYLKILMDEIFERENFINTIIPEMSNASGNKIKHAIKG KKFPKLKEYILLYAKDKNQINLTIPKQAKEKWDKEYNQIIPELTLQSFERIIELIDDKKINELDKMLTGLSLVSLSEFIK SNEKVIIDEWVSSHLSVISENKLTAEQISEQAISDWKWNNAYRIVASKPNKALRKKALKLDFKQPIQSLTNPSGDIKIIL TDFNRETETARIELAFAEINSSIYIGDIWFKITTTGGVAQEGGVNFTNGKKPEQLLKIILDCATKKGDIILDFHLGSGTT AAVAHKMNRQYIGIEQMDYIKTLAVERLKKVIDGEQGGISKAVNWKDGGEFVYAELAPFNESAKQQILACGNSDDIKTLF NELCERYFLKYNVSVNEFSQIIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEK KDGE
Specific function: Unknown
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 83027; Mature: 83027
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDIQTELTQALRSLEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLGNDELKRHFFV CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCEEEEE EVNGVLVFKLQDFRFFLDKHRINNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLN EECCEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCEEEECCHHHHHCC GGQSTEEGEEIYFKRNNDQSDSQLYKKEKRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YTADGKQAVGEIKRRSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYNTGNDG HCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCC FKYNDKFNHSTWLTFMKNRLEIAKKLLADDGVIFVQCDDNEQAYLKILMDEIFERENFIN CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH TIIPEMSNASGNKIKHAIKGKKFPKLKEYILLYAKDKNQINLTIPKQAKEKWDKEYNQII HHHCCCCCCCCHHHHHHHCCCCCCCHHHEEEEEEECCCEEEEECCHHHHHHHHHHHHHHH PELTLQSFERIIELIDDKKINELDKMLTGLSLVSLSEFIKSNEKVIIDEWVSSHLSVISE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHC NKLTAEQISEQAISDWKWNNAYRIVASKPNKALRKKALKLDFKQPIQSLTNPSGDIKIIL CCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEE TDFNRETETARIELAFAEINSSIYIGDIWFKITTTGGVAQEGGVNFTNGKKPEQLLKIIL ECCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH DCATKKGDIILDFHLGSGTTAAVAHKMNRQYIGIEQMDYIKTLAVERLKKVIDGEQGGIS HHCCCCCCEEEEEECCCCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCC KAVNWKDGGEFVYAELAPFNESAKQQILACGNSDDIKTLFNELCERYFLKYNVSVNEFSQ CCCCCCCCCCEEEEEECCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH IIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEK HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHC KDGE CCCC >Mature Secondary Structure MKTDIQTELTQALRSLEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLGNDELKRHFFV CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCEEEEE EVNGVLVFKLQDFRFFLDKHRINNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLN EECCEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCEEEECCHHHHHCC GGQSTEEGEEIYFKRNNDQSDSQLYKKEKRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YTADGKQAVGEIKRRSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYNTGNDG HCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCC FKYNDKFNHSTWLTFMKNRLEIAKKLLADDGVIFVQCDDNEQAYLKILMDEIFERENFIN CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH TIIPEMSNASGNKIKHAIKGKKFPKLKEYILLYAKDKNQINLTIPKQAKEKWDKEYNQII HHHCCCCCCCCHHHHHHHCCCCCCCHHHEEEEEEECCCEEEEECCHHHHHHHHHHHHHHH PELTLQSFERIIELIDDKKINELDKMLTGLSLVSLSEFIKSNEKVIIDEWVSSHLSVISE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHC NKLTAEQISEQAISDWKWNNAYRIVASKPNKALRKKALKLDFKQPIQSLTNPSGDIKIIL CCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEE TDFNRETETARIELAFAEINSSIYIGDIWFKITTTGGVAQEGGVNFTNGKKPEQLLKIIL ECCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH DCATKKGDIILDFHLGSGTTAAVAHKMNRQYIGIEQMDYIKTLAVERLKKVIDGEQGGIS HHCCCCCCEEEEEECCCCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCC KAVNWKDGGEFVYAELAPFNESAKQQILACGNSDDIKTLFNELCERYFLKYNVSVNEFSQ CCCCCCCCCCEEEEEECCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH IIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEK HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHC KDGE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]