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The map label for this gene is dmsC [H]

Identifier: 148828210

GI number: 148828210

Start: 1639021

End: 1639860

Strand: Reverse

Name: dmsC [H]

Synonym: CGSHiGG_08860

Alternate gene names: 148828210

Gene position: 1639860-1639021 (Counterclockwise)

Preceding gene: 148828211

Following gene: 148828209

Centisome position: 86.89

GC content: 36.55

Gene sequence:

>840_bases
ATGAATACAGGATTATATGAACTGCCACTAGTATTTTTTACAGTTTTGGCACAAAGTGCGGTCGGTGCTTGGCTTGTTTT
CACATTTGTACTATTAAATGAGAAAAATACAAAAAGTCGCACTTATATTCATAAAGTAATGTTTGTGATTTTGGCTTTGC
TAGGTATTGGATTTATTGCTTCCATTATGCATCTTGGCTTACCTATACGTGCATTTAATTCACTTAATAGAGTCGGCTCA
TCAATGATGAGTAATGAAATTGCCACTGGTGCAATATTTTTCGCATTAGCAGGTTTCTACTGGCTGATTGCAATTTTAGG
TAAAATGCCAGTTTCACTTGGAAATGTATGGCGAATTGTGACCGCCCTTATCGGCATACTATTTATGTATGTAATGAATC
AGGTTTACCATATTACAAGCATACCAACTTGGAATAATGCATTAACCTCTTGGTCATTCTACCTTACCGTTGTATTAGGT
GGATTAACATTAAGCTATGCGTTATTAATCCCTAATAAACAACGTGAATATCAGCTTCAGCATCTGCCAAGTTTATTTGC
CATTGGAGTATTATTGGTCGCAATAGTAGCCATATATCAAGGCTTCAATTTACACAATATTCACAGTGCTATTCAAAATG
CCGCTGACCTCGTACCAAATTATGCCATAATGACCGTAACTCGCTTATGTTTACTTTCCATTGTAGCTTTCCTCTTATTC
CGAGTGAAAAACATAGGACTATTAGGTATTTCCGTTCTATTAACGTTAGTAGCGGAAGGCATCGGTCGCGTATTATTTTA
TGGATTACATATGACTTACGGCATGGCGATTGGTGGTTAA

Upstream 100 bases:

>100_bases
GCTGATATCACTCAACCAAATTTAGTGGTAAAACCCAATAAACACGCTCGTTTAAGTAGCGATACAAGTGGGTTCTTAGG
AAACCCAAGAGAGGTGTAAG

Downstream 100 bases:

>100_bases
ATTATGTTGAGGCGTATAGCATACGCCTCAATTTTTAGAAACGTTAATTAGTAATATTTAACCAACCCTCATATCCCCAT
TCACTAATGACAAATTGTTT

Product: anaerobic dimethyl sulfoxide reductase chain C

Products: NA

Alternate protein names: DMSO reductase anchor subunit [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGS
SMMSNEIATGAIFFALAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLG
GLTLSYALLIPNKQREYQLQHLPSLFAIGVLLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLF
RVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMAIGG

Sequences:

>Translated_279_residues
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGS
SMMSNEIATGAIFFALAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLG
GLTLSYALLIPNKQREYQLQHLPSLFAIGVLLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLF
RVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMAIGG
>Mature_279_residues
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGS
SMMSNEIATGAIFFALAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLG
GLTLSYALLIPNKQREYQLQHLPSLFAIGVLLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLF
RVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMAIGG

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=285, Percent_Identity=43.1578947368421, Blast_Score=220, Evalue=9e-59,
Organism=Escherichia coli, GI1787123, Length=285, Percent_Identity=41.4035087719298, Blast_Score=201, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30752; Mature: 30752

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8635740 [H]