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The map label for this gene is leuD [H]

Identifier: 148828162

GI number: 148828162

Start: 1575701

End: 1576303

Strand: Direct

Name: leuD [H]

Synonym: CGSHiGG_08530

Alternate gene names: 148828162

Gene position: 1575701-1576303 (Clockwise)

Preceding gene: 148828161

Following gene: 148828165

Centisome position: 83.49

GC content: 40.63

Gene sequence:

>603_bases
ATGGCAGGATTTAAACAACTTTCAGGCTTAGTCGTACCATTGGATGCGGCAAATGTAGATACCGATGCAATTATTCCAAA
ACAATTTTTACAAGCAATTACCCGCGTAGGTTTCGGCAAACACTTATTCCACGAATGGCGTTATCTTGATGTGGACGGCA
CCAAGCCAAATCCAGAATTTGTCTTAAATTATCCGCAATATCAAGGTGCAACAATTTTGTTGGCGCGTAAAAACCTTGGC
TGTGGTTCTTCTCGTGAACACGCCCCTTGGGCATTAGCCGATTACGGTTTCAAAGTAATGATCGCCCCAAGTTTTGCGGA
TATTTTCTACAACAACAGCTTAAATAATCATATGTTACCGATTCGTTTAAGCGAAGAAGAAGTAGAAGAAATCTTCCAAT
GGGTATGGGCAAATGAAAGCAAGCAAATCCACGTAGATTTAGAAGCGATGACGGTCACTGTAGGGGATAAAGTTTATACT
TTTGAGCTTGATGAATTCCGCCGCCATTGTTTGTTAAACGGCTTGGATAATATCGGCTTAACTCTTCAGCACGAAGACAA
AATCTCAGCATACGAGAAAAATATTCCAGCGTTTTTACGTTAA

Upstream 100 bases:

>100_bases
GGACGCACCCATTTAGTAAGTCCTGCAATGGCAGCGGCAGCAGGAGTGTTCGGTAAATTTGTTGATATTCGTGACGTAAC
ATTAAACTAAGGAGCAGAAA

Downstream 100 bases:

>100_bases
AAATAAAAAAAGTGCTGATTTTTCACCGCACTTAATCACTGAATTTCATTCAAAAATAAAGCCCTATAATACACAGGGCT
TTGTTGTTTATAACGTTAAT

Product: isopropylmalate isomerase small subunit

Products: NA

Alternate protein names: Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEFVLNYPQYQGATILLARKNLG
CGSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLPIRLSEEEVEEIFQWVWANESKQIHVDLEAMTVTVGDKVYT
FELDEFRRHCLLNGLDNIGLTLQHEDKISAYEKNIPAFLR

Sequences:

>Translated_200_residues
MAGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEFVLNYPQYQGATILLARKNLG
CGSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLPIRLSEEEVEEIFQWVWANESKQIHVDLEAMTVTVGDKVYT
FELDEFRRHCLLNGLDNIGLTLQHEDKISAYEKNIPAFLR
>Mature_199_residues
AGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEFVLNYPQYQGATILLARKNLGC
GSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLPIRLSEEEVEEIFQWVWANESKQIHVDLEAMTVTVGDKVYTF
ELDEFRRHCLLNGLDNIGLTLQHEDKISAYEKNIPAFLR

Specific function: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate [H]

COG id: COG0066

COG function: function code E; 3-isopropylmalate dehydratase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leuD family. LeuD type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786258, Length=196, Percent_Identity=68.8775510204082, Blast_Score=298, Evalue=2e-82,
Organism=Saccharomyces cerevisiae, GI6321429, Length=197, Percent_Identity=51.2690355329949, Blast_Score=191, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004431
- InterPro:   IPR012305
- InterPro:   IPR015937
- InterPro:   IPR015928
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00694 Aconitase_C [H]

EC number: =4.2.1.33 [H]

Molecular weight: Translated: 22814; Mature: 22683

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEF
CCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEECCCCCCCCCE
VLNYPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLP
EEECCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCCEEE
IRLSEEEVEEIFQWVWANESKQIHVDLEAMTVTVGDKVYTFELDEFRRHCLLNGLDNIGL
EEECHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEEEHHHHHHHHHHCCCCCCCE
TLQHEDKISAYEKNIPAFLR
EEEECCHHHHHHCCCCHHCC
>Mature Secondary Structure 
AGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEF
CCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEECCCCCCCCCE
VLNYPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLP
EEECCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCCEEE
IRLSEEEVEEIFQWVWANESKQIHVDLEAMTVTVGDKVYTFELDEFRRHCLLNGLDNIGL
EEECHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEEEHHHHHHHHHHCCCCCCCE
TLQHEDKISAYEKNIPAFLR
EEEECCHHHHHHCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA