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The map label for this gene is recA

Identifier: 148827785

GI number: 148827785

Start: 1141056

End: 1142120

Strand: Direct

Name: recA

Synonym: CGSHiGG_06270

Alternate gene names: 148827785

Gene position: 1141056-1142120 (Clockwise)

Preceding gene: 148827770

Following gene: 148827786

Centisome position: 60.46

GC content: 39.06

Gene sequence:

>1065_bases
ATGGCAACTCAAGAAGAAAAACAAAAAGCACTAGCAGCTGCATTAGGGCAAATCGAAAAACAATTTGGTAAAGGCTCAAT
TATGAAATTAGGCGATACCAAAACGTTAGACGTAGAGTCTATTTCTACTGGATCGCTTGGGTTAGATGTTGCGCTAGGGA
TTGGTGGTTTGCCTATGGGTCGAATTGTAGAAATTTTCGGGCCTGAATCATCGGGTAAAACAACATTAACTCTTTCCGTC
ATTGCTCAAGCGCAAAAAGCAGGAAAAACCTGTGCATTTATTGATGCAGAACACGCACTTGATCCTATTTATGCAGCAAA
ACTTGGTGTAGATGTAAAAGAACTTTTTGTTTCTCAACCAGATAATGGGGAACAGGCACTTGAAATCTGTGATGCATTAG
TTCGCTCAGGCGCAATTGATGTTATTATTGTGGACTCCGTTGCCGCACTGACGCCAAAAGCTGAAATTGAAGGGGATATG
GGCGATTCTCATATGGGTCTGCAAGCACGTTTAATGTCTCAAGCTTTGCGTAAACTCACAGGTCAAATTAAAAATGCAAA
CTGTCTAGTTGTGTTTATTAACCAAATCCGTATGAAAATAGGCGTGATGTTTGGTAATCCTGAAACCACCACAGGCGGTA
ATGCATTAAAATTCTATTCTTCTGTTCGCTTAGATATTCGCCGTACAGGTTCTGTAAAAGATGGCGAAAATATTATTGGA
AATGAAACTCGCGTAAAAGTAGTAAAAAACAAATTAGCGGCACCGTTCCGCCAAGTGGATTTCCAAATTCTCTATGGAGA
AGGCATTTCAAAAGCAGGGGAATTATTAGAACTTGGGGTAAAACACAAACTTGTAGAAAAATCAGGCGCGTGGTATTCCT
ACAATGGTGAAAAAATTGGTCAAGGAAAGGCTAATTCAATGAAATGGCTTAACGAAAATATAGAGAAATCAGATGAATTA
GAAGCTCGTTTACGTGCTGAATTAGTGGCCAATCCAGAACAAGCCTTAATGGCGGATATTGAACAATCTGAAAATAATAC
TGAATCAGAAAGTGATTTTGAATAA

Upstream 100 bases:

>100_bases
ATATACCCATATTTTTTATTAATATAAATATTTTTCTTGACCTGTACATCAATACAGATATAATCATAAAAAAATTGAAC
ATTCAAACAGGATTTTAATT

Downstream 100 bases:

>100_bases
AGAAAATTACAAATGCCAAAAGTGCGGTTAAAAATGACCGCACTTTATATCAACTCAATAAAAATAAAGGAATCATTCCT
TGTCATCTCTTGCTTTTAAT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIGQGKANSMKWLNENIEKSDEL
EARLRAELVANPEQALMADIEQSENNTESESDFE

Sequences:

>Translated_354_residues
MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIGQGKANSMKWLNENIEKSDEL
EARLRAELVANPEQALMADIEQSENNTESESDFE
>Mature_353_residues
ATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVI
AQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDMG
DSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIGN
ETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIGQGKANSMKWLNENIEKSDELE
ARLRAELVANPEQALMADIEQSENNTESESDFE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=353, Percent_Identity=73.371104815864, Blast_Score=547, Evalue=1e-157,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_HAEI8 (Q4QMV2)

Other databases:

- EMBL:   CP000057
- RefSeq:   YP_248305.1
- ProteinModelPortal:   Q4QMV2
- STRING:   Q4QMV2
- GeneID:   3430042
- GenomeReviews:   CP000057_GR
- KEGG:   hit:NTHI0729
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   Q4QMV2
- ProtClustDB:   PRK09354
- BioCyc:   HINF281310:NTHI0729-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38133; Mature: 38002

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMG
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCEEEEECCCCCCHH
RIVEIFGPESSGKTTLTLSVIAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQP
HEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCCCHHHHHCCCC
DNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLT
CCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
GQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
CCCCCCCEEEEEEHHHEEEEEEEECCCCCCCCCCCEEEHHHEEEEEEECCCCCCCCCCCC
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIG
CCHHHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
QGKANSMKWLNENIEKSDELEARLRAELVANPEQALMADIEQSENNTESESDFE
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMG
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCEEEEECCCCCCHH
RIVEIFGPESSGKTTLTLSVIAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQP
HEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCCCHHHHHCCCC
DNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLT
CCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
GQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
CCCCCCCEEEEEEHHHEEEEEEEECCCCCCCCCCCEEEHHHEEEEEEECCCCCCCCCCCC
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIG
CCHHHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
QGKANSMKWLNENIEKSDELEARLRAELVANPEQALMADIEQSENNTESESDFE
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA