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The map label for this gene is tdk [H]

Identifier: 148827720

GI number: 148827720

Start: 1075913

End: 1076494

Strand: Reverse

Name: tdk [H]

Synonym: CGSHiGG_05895

Alternate gene names: 148827720

Gene position: 1076494-1075913 (Counterclockwise)

Preceding gene: 148827721

Following gene: 148827719

Centisome position: 57.04

GC content: 37.97

Gene sequence:

>582_bases
ATGGCAAAACTCTACTTCTATTACTCCACAATGAACGCCGGAAAATCAACGACGTTGCTACAATCTTCCTATAACTATCG
TGAGCGTGATATGAACACATTAGTTTATACGGCTGCGATTGATGATCGTTTTGGCGTGGGGAAAGTCACATCGCGTATTG
GCATTTCGCAAGATGCCTTTTTATTTCGCTCGGAAACCAATTTGTTTGATGAAATTAATGAGCATTTAAAAAAAGAAAAA
GTGCATTGTGTGTTGGTGGATGAAGCTCAATTTCTTAGCAAACAACAAGTTTACCAGTTGAGTGATGTTGTTGATAAACT
CAAAATCCCTGTGCTTTGTTATGGCTTGCGTACAGATTTCCAAGCGGAACTTTTTGAAGGAAGTAAATATTTACTGGCTT
GGGCGGATCAACTCGAAGAATTAAAAACAATTTGTTATTGTGGCCGCAAGGCTAATTTTGTTTTGCGTTTAAATGATCAG
GGCGAGGTCATTAAAGAAGGCGCACAAATTCAAATTGGAGGCAATGATTCTTATCTTTCTGTTTGCCGTTTACACTATAA
AGAAAAGTGCGGTCAAATTTAA

Upstream 100 bases:

>100_bases
CAGGTTTGTTACGTTTAAAACAAGGTCAGCATAGCGATCTGGCTATTGATGTTAAGCCTCGTTGGGCAATGACGGAATTA
CTGGCAATTTAGGAGAAAAA

Downstream 100 bases:

>100_bases
ATTAGTTTTTAAACACAACATTATAAGGACAATTTTATGCTAAAAAACAAAACTTTTGGGAGTGCGCTGATTATTGCAGG
CACAACCATTGGAGCAGGTA

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAKLYFYYSTMNAGKSTTLLQSSYNYRERDMNTLVYTAAIDDRFGVGKVTSRIGISQDAFLFRSETNLFDEINEHLKKEK
VHCVLVDEAQFLSKQQVYQLSDVVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADQLEELKTICYCGRKANFVLRLNDQ
GEVIKEGAQIQIGGNDSYLSVCRLHYKEKCGQI

Sequences:

>Translated_193_residues
MAKLYFYYSTMNAGKSTTLLQSSYNYRERDMNTLVYTAAIDDRFGVGKVTSRIGISQDAFLFRSETNLFDEINEHLKKEK
VHCVLVDEAQFLSKQQVYQLSDVVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADQLEELKTICYCGRKANFVLRLNDQ
GEVIKEGAQIQIGGNDSYLSVCRLHYKEKCGQI
>Mature_192_residues
AKLYFYYSTMNAGKSTTLLQSSYNYRERDMNTLVYTAAIDDRFGVGKVTSRIGISQDAFLFRSETNLFDEINEHLKKEKV
HCVLVDEAQFLSKQQVYQLSDVVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADQLEELKTICYCGRKANFVLRLNDQG
EVIKEGAQIQIGGNDSYLSVCRLHYKEKCGQI

Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1787490, Length=188, Percent_Identity=68.6170212765958, Blast_Score=276, Evalue=7e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020633
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 22178; Mature: 22046

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00603 TK_CELLULAR_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLYFYYSTMNAGKSTTLLQSSYNYRERDMNTLVYTAAIDDRFGVGKVTSRIGISQDAF
CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCE
LFRSETNLFDEINEHLKKEKVHCVLVDEAQFLSKQQVYQLSDVVDKLKIPVLCYGLRTDF
EEECCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
QAELFEGSKYLLAWADQLEELKTICYCGRKANFVLRLNDQGEVIKEGAQIQIGGNDSYLS
HHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCEEEECCCCCHHH
VCRLHYKEKCGQI
HHHHHHHHHCCCC
>Mature Secondary Structure 
AKLYFYYSTMNAGKSTTLLQSSYNYRERDMNTLVYTAAIDDRFGVGKVTSRIGISQDAF
CEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCE
LFRSETNLFDEINEHLKKEKVHCVLVDEAQFLSKQQVYQLSDVVDKLKIPVLCYGLRTDF
EEECCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
QAELFEGSKYLLAWADQLEELKTICYCGRKANFVLRLNDQGEVIKEGAQIQIGGNDSYLS
HHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCEEEECCCCCHHH
VCRLHYKEKCGQI
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA