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The map label for this gene is deoD [C]

Identifier: 148827711

GI number: 148827711

Start: 1066666

End: 1067454

Strand: Reverse

Name: deoD [C]

Synonym: CGSHiGG_05850

Alternate gene names: 148827711

Gene position: 1067454-1066666 (Counterclockwise)

Preceding gene: 148827712

Following gene: 148827710

Centisome position: 56.56

GC content: 39.67

Gene sequence:

>789_bases
ATGACCGCACTTTCTGAGATTTTTGTGCCGTTGCATCGGATTATTCCGTTTTCAAATGTAGAGGGACAAGGCAATCGTTC
GAGTATTTTTCTGCAAGGTTGCAAGCTAAATTGCTTGTATTGCCATAATCCGGAAACTATTCCTCGTTATACGGAAAATG
CGAAATTGGTCAGTTTGCAGTATTTGTATGAACAGGTTATGGAGGCAGTTCCATTTATTCGCGGTGTAACGGTTTCTGGT
GGAGAACCCACTATTCATCACAAAAAACTTGTGCCACTCTTTAAGGCTTTACGTTCGCAAGGATTGACTTGTTATTTGGA
TAGTAGTGGCTTTTTTGAGTTTGATCGTGTTTGTTCGTTAATTGATGTCACTGACAAATTTTTATTTGATCTCAAAGGCG
AGGGCATTGGCTTGCAAACACTTTGTTTCGATCGGAAAAATCAAGCTGGCATTGTACCACAGCAAGTGATACTAGAACGT
TTGCATATAAAAAACGATAAACTGGAGCGGAATTTGCAAAATTTAGCTGCCTTGTTGCCATTAAATAAAGTGGAAGAAGT
GCGGTTGGTTTTTTTAAAGCATTTTTTTGATGCGGAACATTTGGTGGGCAAAGTTGCTCAACTACTACGAAATTATCCTG
ATGTGGCATTAAAAATTATCCGCGTGCATAGCAAAGGTACGCGTGATGAAGCTGGGTTATCAGCGCATATCCCAAGTGTG
GAAGAAACTAATGCGCTATCTGCTTATGCGCGTCAATGTGGAATTAACAAGGTTTTGACTATTTTATAG

Upstream 100 bases:

>100_bases
ATACAACTTGGTATGGCTCGGGTACGGATGAATGTGCCAATGTGTTTGATCGCCAATTACGCGATGAAAAAGATGTGATC
GCTGAAAAATAATTAGAAAA

Downstream 100 bases:

>100_bases
ACGTTTACAAAAAGTGCGGTGAAAATTCGCCGACTTTTCATAAGAAAACAAGTAGAATAAGCCGAATTTTATTAACTTAA
CTAATCTAGGGGAATCAAAT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTALSEIFVPLHRIIPFSNVEGQGNRSSIFLQGCKLNCLYCHNPETIPRYTENAKLVSLQYLYEQVMEAVPFIRGVTVSG
GEPTIHHKKLVPLFKALRSQGLTCYLDSSGFFEFDRVCSLIDVTDKFLFDLKGEGIGLQTLCFDRKNQAGIVPQQVILER
LHIKNDKLERNLQNLAALLPLNKVEEVRLVFLKHFFDAEHLVGKVAQLLRNYPDVALKIIRVHSKGTRDEAGLSAHIPSV
EETNALSAYARQCGINKVLTIL

Sequences:

>Translated_262_residues
MTALSEIFVPLHRIIPFSNVEGQGNRSSIFLQGCKLNCLYCHNPETIPRYTENAKLVSLQYLYEQVMEAVPFIRGVTVSG
GEPTIHHKKLVPLFKALRSQGLTCYLDSSGFFEFDRVCSLIDVTDKFLFDLKGEGIGLQTLCFDRKNQAGIVPQQVILER
LHIKNDKLERNLQNLAALLPLNKVEEVRLVFLKHFFDAEHLVGKVAQLLRNYPDVALKIIRVHSKGTRDEAGLSAHIPSV
EETNALSAYARQCGINKVLTIL
>Mature_261_residues
TALSEIFVPLHRIIPFSNVEGQGNRSSIFLQGCKLNCLYCHNPETIPRYTENAKLVSLQYLYEQVMEAVPFIRGVTVSGG
EPTIHHKKLVPLFKALRSQGLTCYLDSSGFFEFDRVCSLIDVTDKFLFDLKGEGIGLQTLCFDRKNQAGIVPQQVILERL
HIKNDKLERNLQNLAALLPLNKVEEVRLVFLKHFFDAEHLVGKVAQLLRNYPDVALKIIRVHSKGTRDEAGLSAHIPSVE
ETNALSAYARQCGINKVLTIL

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

Organism=Escherichia coli, GI1787130, Length=128, Percent_Identity=35.15625, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 29502; Mature: 29371

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS01087 RADICAL_ACTIVATING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALSEIFVPLHRIIPFSNVEGQGNRSSIFLQGCKLNCLYCHNPETIPRYTENAKLVSLQ
CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEHHH
YLYEQVMEAVPFIRGVTVSGGEPTIHHKKLVPLFKALRSQGLTCYLDSSGFFEFDRVCSL
HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHH
IDVTDKFLFDLKGEGIGLQTLCFDRKNQAGIVPQQVILERLHIKNDKLERNLQNLAALLP
HHHHHHHHHHCCCCCCCEEHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
LNKVEEVRLVFLKHFFDAEHLVGKVAQLLRNYPDVALKIIRVHSKGTRDEAGLSAHIPSV
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEECCCCC
EETNALSAYARQCGINKVLTIL
CHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure 
TALSEIFVPLHRIIPFSNVEGQGNRSSIFLQGCKLNCLYCHNPETIPRYTENAKLVSLQ
CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEHHH
YLYEQVMEAVPFIRGVTVSGGEPTIHHKKLVPLFKALRSQGLTCYLDSSGFFEFDRVCSL
HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHH
IDVTDKFLFDLKGEGIGLQTLCFDRKNQAGIVPQQVILERLHIKNDKLERNLQNLAALLP
HHHHHHHHHHCCCCCCCEEHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
LNKVEEVRLVFLKHFFDAEHLVGKVAQLLRNYPDVALKIIRVHSKGTRDEAGLSAHIPSV
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEECCCCC
EETNALSAYARQCGINKVLTIL
CHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]