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The map label for this gene is deoD [H]

Identifier: 148827709

GI number: 148827709

Start: 1064514

End: 1065230

Strand: Reverse

Name: deoD [H]

Synonym: CGSHiGG_05840

Alternate gene names: 148827709

Gene position: 1065230-1064514 (Counterclockwise)

Preceding gene: 148827710

Following gene: 148827708

Centisome position: 56.45

GC content: 39.89

Gene sequence:

>717_bases
ATGACTCCACATATTAACGCGCCTGAAGGTGCATTTGCTGATGTTGTTTTAATGCCTGGCGATCCACTTCGTGCAAAATA
CATTGCAGAAACTTTTTTACAAGATGTTGTTGAAGTAACGAATGTTCGTAATATGCTTGGTTTTACTGGAACTTATAAAG
GTCGTAAAATTTCTATTATGGGGCACGGTATGGGGATTCCATCTTGCTCTATTTACGCGAAAGAATTAATCACTGAATAT
GGCGTGAAAAAAATCATCCGTGTAGGTTCTTGTGGCACTGTTCGTATGGACGTGAAAGTGCGCGATGTGATTATCGGTTT
AGGTGCATGTACTGATTCAAAAGTAAACCGTATTCGTTTCAAAGATAACGACTTTGCAGCTATTGCTGACTTCGATATGG
CACAAGCTGCTGTTCAAGCTGCAAAAGCAAAAGGCAAAGCCGTTCGTGTCGGTAACTTATTCTCGGCGGATTTATTCTAT
ACACCCGATGTAGAAATGTTCGATGTAATGGAAAAATACGGCATTTTAGGTGTGGAAATGGAAGCTGCTGGAATTTATGG
TGTGGCTGCAGAATATGGTGCAAAAGCATTAACGATTTGTACCGTGTCTGACCATATTCGTACTCACGAACAAACCACGG
CAGAAGAACGTCAATTAACATTCAATGATATGATTGAAATTGCGTTAGATTCAGTATTAATTGGTGATGCACAGTAA

Upstream 100 bases:

>100_bases
GTGCTGCAGCACTTTAATTTATCTTAATCAATTAAAAAGTGCGGTAAAAAATGACCGCACTTTATTCATTTTTATTCATT
ATTAAAAATAAGGAAAAATT

Downstream 100 bases:

>100_bases
TTTCTTATAGTGGATTTAAGAAGTGCTTGAAAAACAACCGCACTTTTTATATAATCCGCGCCCATTATGAGCCGTTTGCG
GCTCATATTTTTGTGTGGTG

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTPHINAPEGAFADVVLMPGDPLRAKYIAETFLQDVVEVTNVRNMLGFTGTYKGRKISIMGHGMGIPSCSIYAKELITEY
GVKKIIRVGSCGTVRMDVKVRDVIIGLGACTDSKVNRIRFKDNDFAAIADFDMAQAAVQAAKAKGKAVRVGNLFSADLFY
TPDVEMFDVMEKYGILGVEMEAAGIYGVAAEYGAKALTICTVSDHIRTHEQTTAEERQLTFNDMIEIALDSVLIGDAQ

Sequences:

>Translated_238_residues
MTPHINAPEGAFADVVLMPGDPLRAKYIAETFLQDVVEVTNVRNMLGFTGTYKGRKISIMGHGMGIPSCSIYAKELITEY
GVKKIIRVGSCGTVRMDVKVRDVIIGLGACTDSKVNRIRFKDNDFAAIADFDMAQAAVQAAKAKGKAVRVGNLFSADLFY
TPDVEMFDVMEKYGILGVEMEAAGIYGVAAEYGAKALTICTVSDHIRTHEQTTAEERQLTFNDMIEIALDSVLIGDAQ
>Mature_237_residues
TPHINAPEGAFADVVLMPGDPLRAKYIAETFLQDVVEVTNVRNMLGFTGTYKGRKISIMGHGMGIPSCSIYAKELITEYG
VKKIIRVGSCGTVRMDVKVRDVIIGLGACTDSKVNRIRFKDNDFAAIADFDMAQAAVQAAKAKGKAVRVGNLFSADLFYT
PDVEMFDVMEKYGILGVEMEAAGIYGVAAEYGAKALTICTVSDHIRTHEQTTAEERQLTFNDMIEIALDSVLIGDAQ

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=237, Percent_Identity=83.9662447257384, Blast_Score=409, Evalue=1e-116,
Organism=Escherichia coli, GI1790265, Length=234, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25872; Mature: 25741

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPHINAPEGAFADVVLMPGDPLRAKYIAETFLQDVVEVTNVRNMLGFTGTYKGRKISIM
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GHGMGIPSCSIYAKELITEYGVKKIIRVGSCGTVRMDVKVRDVIIGLGACTDSKVNRIRF
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEE
KDNDFAAIADFDMAQAAVQAAKAKGKAVRVGNLFSADLFYTPDVEMFDVMEKYGILGVEM
CCCCEEEEECHHHHHHHHHHHHCCCCEEEECCEEECCEEECCCCHHHHHHHHHCCEEEEE
EAAGIYGVAAEYGAKALTICTVSDHIRTHEQTTAEERQLTFNDMIEIALDSVLIGDAQ
ECCCEEEEHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCC
>Mature Secondary Structure 
TPHINAPEGAFADVVLMPGDPLRAKYIAETFLQDVVEVTNVRNMLGFTGTYKGRKISIM
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GHGMGIPSCSIYAKELITEYGVKKIIRVGSCGTVRMDVKVRDVIIGLGACTDSKVNRIRF
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEE
KDNDFAAIADFDMAQAAVQAAKAKGKAVRVGNLFSADLFYTPDVEMFDVMEKYGILGVEM
CCCCEEEEECHHHHHHHHHHHHCCCCEEEECCEEECCEEECCCCHHHHHHHHHCCEEEEE
EAAGIYGVAAEYGAKALTICTVSDHIRTHEQTTAEERQLTFNDMIEIALDSVLIGDAQ
ECCCEEEEHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA