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The map label for this gene is comC [H]

Identifier: 148827634

GI number: 148827634

Start: 982412

End: 982933

Strand: Reverse

Name: comC [H]

Synonym: CGSHiGG_05405

Alternate gene names: 148827634

Gene position: 982933-982412 (Counterclockwise)

Preceding gene: 148827635

Following gene: 148827633

Centisome position: 52.08

GC content: 36.97

Gene sequence:

>522_bases
ATGAAAGCTTTTTTTAACGATCCTTTTACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTAGCCCCGTTTTAGATTATATAGAGGCTAGTACGCGTTTTGATGAAACTGAGT
ATGAATTAGCTAAAAAAAGTTCGGAATTGTTGCATCAACAGAAAATTTTAACCTCTTTACAACAGCAGTCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCACGCAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCAGAAGACAGTCCATTG
CAAACCGAGATCATTTTTCAGCTAGATAAGGAAACAAAATGA

Upstream 100 bases:

>100_bases
AATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTTGAT
GTGGAACAAGGGGCGGAAAA

Downstream 100 bases:

>100_bases
AACATTGGTTTTTCCTGATTATATTATTTTTTATGAATTGCAGTTGGGGACAAGATCCTTTCGATAAAACACAGCGTAAC
CGTTCTCAGTTTGATAACGC

Product: competence protein C

Products: NA

Alternate protein names: DNA transformation protein ComC [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFSPVLDYIEASTRFDETEYELAKKSSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDKETK

Sequences:

>Translated_173_residues
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFSPVLDYIEASTRFDETEYELAKKSSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDKETK
>Mature_173_residues
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFSPVLDYIEASTRFDETEYELAKKSSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDKETK

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19901; Mature: 19901

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFSPVLDYIEASTRFDETEYELAKKS
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SELLHQQKILTSLQQQSESRKLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPIL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCEE
HLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPLQTEIIFQLDKETK
EEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHEEECCCCC
>Mature Secondary Structure
MKAFFNDPFTPFGKWLSQPFYVHGLTFLLLLSAVIFSPVLDYIEASTRFDETEYELAKKS
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SELLHQQKILTSLQQQSESRKLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPIL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCEE
HLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPLQTEIIFQLDKETK
EEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800 [H]