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The map label for this gene is ychJ [C]

Identifier: 148827431

GI number: 148827431

Start: 790311

End: 790793

Strand: Reverse

Name: ychJ [C]

Synonym: CGSHiGG_04185

Alternate gene names: 148827431

Gene position: 790793-790311 (Counterclockwise)

Preceding gene: 148827432

Following gene: 148827430

Centisome position: 41.9

GC content: 38.92

Gene sequence:

>483_bases
ATGTCAGAAATTTCAACCGCACTTTCAGAGGACTGTCCATGTCAATCTAGTCATCATTACGCAGATTGTTGTGGCAAATT
TCATTTGAGACAAGCATTTCCCGAAACGGCAGAGCAACTTATGCGTTCACGTTATACGGCTTATGTGTTAAAAAATATTC
CCTATATTGTTGTAACAACTGTGCCAAGCCAACAAACTTTATTAAAGCCTAGGTTATTGCAAGAATGGGCTGACAACACT
ACGTGGCTAGGATTAGAAATTCTAAAAACGGAAAGCCTTACAAAAACTCAAAGTGCGGTGGAATTTAAGGCGATTTTTCA
AGGCGAAGAATGTGAGCAAGCCCATCAAGAACGGTCAATTTTTGTGAAAATTGAAGATCGTTGGTATTTTGTGGATCCGA
CCGTATCATTACCGACAATGAAACAACCTTGTGTCTGTGGTTCGGGTAAAAAATTTAAACATTGTTGTGGAGGATTTCTA
TGA

Upstream 100 bases:

>100_bases
AAGCTGAATTAGATGCAGCATTAGAGATTGAAGTATTAGCTGAAGCCTTTAAACGCTCAATTCGATCGCAAATATCGAAA
TTCAAACAACAGGGATAAAT

Downstream 100 bases:

>100_bases
TTTCATTAAAAAATTTTGGATTATTATTTTGGAAACGTTTTTCAGAAAATAAACTTAATCAAGTAGCTGGCGCATTGACT
TATAGCACAATGTTAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSEISTALSEDCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTTVPSQQTLLKPRLLQEWADNT
TWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSIFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL

Sequences:

>Translated_160_residues
MSEISTALSEDCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTTVPSQQTLLKPRLLQEWADNT
TWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSIFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL
>Mature_159_residues
SEISTALSEDCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTTVPSQQTLLKPRLLQEWADNTT
WLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSIFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=152, Percent_Identity=36.8421052631579, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18260; Mature: 18129

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEISTALSEDCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTT
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
VPSQQTLLKPRLLQEWADNTTWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSI
CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEE
FVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL
EEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
SEISTALSEDCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTT
CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
VPSQQTLLKPRLLQEWADNTTWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSI
CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEE
FVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL
EEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]