Click here to switch to the map view.

The map label for this gene is zntR [C]

Identifier: 148827325

GI number: 148827325

Start: 657517

End: 657924

Strand: Direct

Name: zntR [C]

Synonym: CGSHiGG_03530

Alternate gene names: 148827325

Gene position: 657517-657924 (Clockwise)

Preceding gene: 148827322

Following gene: 148827326

Centisome position: 34.84

GC content: 37.99

Gene sequence:

>408_bases
GTGACTTACACCACCGCTAAAGCTGCTGAAAAAATAGGCATTTCCGCCTACACCTTACGCTTTTATGACAAAGAAGGCTT
GTTACCTAATGTCGGACGTGATGAATACGGTAATCGCCGTTTTACCGACAAGGATTTGCAATGGTTAAGTTTATTACAAT
GCTTGAAAAATACAGGAATGAGCTTAAAAGACATCAAACGCTTTGCGGAATGTACCATCATTGGCGACGATACCATTGAA
GAACGCCTTTCCTTATTTGAAAATCAAACAAAAAATGTAAAGTGTCAAATTGCCGAATTAAAACGTTATTTAGATTTGCT
TGAATACAAATTAGCGTTTTACCAAAAAGCGAAAGCACTAGGCTCGGTAAAAGCCGTAAATTTACCGCAAATTCCTGAAA
CGAGCTAA

Upstream 100 bases:

>100_bases
ACAAAGTTGCCTTACGTAAGCAAGATAGCAACAGTTTACACTTTAGAGTTCACTCTAAAGCAAGTGTTTTTTTACCATTT
TTGTTTAAAGGGAATAAAAA

Downstream 100 bases:

>100_bases
AAGGATAAAAGTGCTCACATCACAGAATTAGAAGAAAAATACAATTTTTAGAGATAGATAAATTTTAACTTTTTTATTAC
ATCAATAAGTTAAAAATCAG

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGMSLKDIKRFAECTIIGDDTIE
ERLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETS

Sequences:

>Translated_135_residues
MTYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGMSLKDIKRFAECTIIGDDTIE
ERLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETS
>Mature_134_residues
TYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGMSLKDIKRFAECTIIGDDTIEE
RLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETS

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y186_HAEIN (P44558)

Other databases:

- EMBL:   L42023
- PIR:   I64052
- RefSeq:   NP_438354.1
- ProteinModelPortal:   P44558
- SMR:   P44558
- GeneID:   951087
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0186
- TIGR:   HI_0186
- HOGENOM:   HBG710951
- OMA:   IRYYDKQ
- ProtClustDB:   CLSK877991
- BioCyc:   HINF71421:HI_0186-MONOMER
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358
- PRINTS:   PR00040
- SMART:   SM00422

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind; SSF46955 Putativ_DNA_bind

EC number: NA

Molecular weight: Translated: 15481; Mature: 15350

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS00552 HTH_MERR_1; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGM
CCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SLKDIKRFAECTIIGDDTIEERLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKAL
CHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
GSVKAVNLPQIPETS
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGM
CCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SLKDIKRFAECTIIGDDTIEERLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKAL
CHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
GSVKAVNLPQIPETS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800