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The map label for this gene is ygdQ [C]

Identifier: 148827211

GI number: 148827211

Start: 510862

End: 511575

Strand: Reverse

Name: ygdQ [C]

Synonym: CGSHiGG_02780

Alternate gene names: 148827211

Gene position: 511575-510862 (Counterclockwise)

Preceding gene: 148827212

Following gene: 148827207

Centisome position: 27.11

GC content: 36.27

Gene sequence:

>714_bases
ATGTTTGAATGGATTACCGATCCTGAAGCCTGGGTATCACTTGCGACACTTACTGCTTTGGAGATCGTTTTAGGGGTCGA
TAATATTATTTTTATTAGTATCCTAGTTGGGCGTTTACCTGAAAGCCAACGCCAGTCTGGTCGTATTATTGGACTTGGTT
TAGCAATGCTGACAAGAATTTTACTTTTAATGTCACTTGCTTGGATTATGAAACTTACTGCACCATTATTTACTCTGTTT
AATCAAGCAATTTCTGGGCGTGATTTGATTTTATTCATCGGAGGTTTATTCCTGATTATAAAAAGCTTTGGGGAAATTAA
AGAGGCAATAAATCATCAAGAACACCATAATTCTGAAGGCAAAAACAAAGTGAGTTATTTTGGCGTATTAATTCAAATTG
CAGTGCTAGATATTGTTTTTTCTTTAGATTCTGTGATTACAGCAGTAGGTATGGCAAGCCACCTTCCTGTGATGATTTTG
GCGATTATTATTGCCGTTGGCGTGATGATGTTTGCAGCAAAACCAATCGGCGCTTTCGTAGATACGCATCCAACCTTGAA
AATTCTAGCTTTAGCCTTCTTAGTTTTAGTTGGAATTAGTTTAATTGCAGAAAGTTTAGATATTCACATCCCGAAAGGTT
ACATCTATTTTGCAATGGGATTCTCTGTTGTAGTCGAAATGATCAATATTCGAATGAGAAGATTGATGAAATAA

Upstream 100 bases:

>100_bases
TAATCAATTATCTCTTAAATGTAAATAACGATTGCTTTTCATCATAAAGTCATTATGATCCGAACTTTCGGATCTATTTA
ACTCTATTATAGGAAAAATT

Downstream 100 bases:

>100_bases
ATTGGAAGTGCGGTCGATAAAAATAATGTTTTTTATGACCGCACTTTTTCTTTTACTTATTGAAATACACTTTTTTTAGT
GCCATCTCTAAACCGCGAAA

Product: mannonate dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MFEWITDPEAWVSLATLTALEIVLGVDNIIFISILVGRLPESQRQSGRIIGLGLAMLTRILLLMSLAWIMKLTAPLFTLF
NQAISGRDLILFIGGLFLIIKSFGEIKEAINHQEHHNSEGKNKVSYFGVLIQIAVLDIVFSLDSVITAVGMASHLPVMIL
AIIIAVGVMMFAAKPIGAFVDTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK

Sequences:

>Translated_237_residues
MFEWITDPEAWVSLATLTALEIVLGVDNIIFISILVGRLPESQRQSGRIIGLGLAMLTRILLLMSLAWIMKLTAPLFTLF
NQAISGRDLILFIGGLFLIIKSFGEIKEAINHQEHHNSEGKNKVSYFGVLIQIAVLDIVFSLDSVITAVGMASHLPVMIL
AIIIAVGVMMFAAKPIGAFVDTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK
>Mature_237_residues
MFEWITDPEAWVSLATLTALEIVLGVDNIIFISILVGRLPESQRQSGRIIGLGLAMLTRILLLMSLAWIMKLTAPLFTLF
NQAISGRDLILFIGGLFLIIKSFGEIKEAINHQEHHNSEGKNKVSYFGVLIQIAVLDIVFSLDSVITAVGMASHLPVMIL
AIIIAVGVMMFAAKPIGAFVDTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=237, Percent_Identity=59.915611814346, Blast_Score=257, Evalue=6e-70,
Organism=Escherichia coli, GI1788119, Length=232, Percent_Identity=49.1379310344828, Blast_Score=244, Evalue=5e-66,
Organism=Escherichia coli, GI87082033, Length=227, Percent_Identity=49.3392070484581, Blast_Score=218, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 26102; Mature: 26102

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWITDPEAWVSLATLTALEIVLGVDNIIFISILVGRLPESQRQSGRIIGLGLAMLTRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEHHHHHHHHH
LLLMSLAWIMKLTAPLFTLFNQAISGRDLILFIGGLFLIIKSFGEIKEAINHQEHHNSEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
KNKVSYFGVLIQIAVLDIVFSLDSVITAVGMASHLPVMILAIIIAVGVMMFAAKPIGAFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
DTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFEWITDPEAWVSLATLTALEIVLGVDNIIFISILVGRLPESQRQSGRIIGLGLAMLTRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEHHHHHHHHH
LLLMSLAWIMKLTAPLFTLFNQAISGRDLILFIGGLFLIIKSFGEIKEAINHQEHHNSEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
KNKVSYFGVLIQIAVLDIVFSLDSVITAVGMASHLPVMILAIIIAVGVMMFAAKPIGAFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
DTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]