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The map label for this gene is ybeQ [H]

Identifier: 148827085

GI number: 148827085

Start: 359180

End: 359923

Strand: Reverse

Name: ybeQ [H]

Synonym: CGSHiGG_02010

Alternate gene names: 148827085

Gene position: 359923-359180 (Counterclockwise)

Preceding gene: 148827086

Following gene: 148827084

Centisome position: 19.07

GC content: 33.47

Gene sequence:

>744_bases
ATGAATCTTATAAAAACACTTGTAACAACGGTATTTTTAAGTAGTTCTGTATTTTCTTTTCATTCAATAGCTTGGGCAAA
TACTGCAGAAAAGCAATTTCAACAAGGATTTTCTGCATATGAAAAAGGTGATTATAAAACGGCACTTAATCTTTGGTTAC
CTTTGGCTCAGCAAGGTAATATGAATGCTCAATATAATTTGGGATTGATGTATGAAAATGGAAACGGCGTAAAGCAAAGT
GATTTTGAAGCTGTAAAATGGTATAGAAAAGCTGCAGAACAAGGGGAATCGAGTTCACAGTTTAATTTAGGAGTGAAATA
CTATAAAGGGGAAGGTGTAAAGCAAGATAAGATTCAAGCTAAAAAATGGTTTGGTAAGGCTTGTGATAATGGTGAAACAA
AAGGTTGTAACAATTATCGTGCTTTAAATGAAGAAAATTCTTACTTAACAAAAATGAATAAACCTTCGCTTAATGAATTA
ATATCACTTGCTCAGCAAGGTAATATGAATGCTCAATATTTATTAGGGCAATCTTATTATAGAACTAAAAATTACTCGTC
TGCGGCTTATTGGTTTCAGATGGCAGCAGACCGAGGTCATAAAAGAGCTCAAACTATTCTAGCCGGAATGTATCATTTGG
GAAAGGGAGTACCCCAAAATATTCTTATGGCAAGAAATTTATCTCAAGATGCCTGTAATCACGGTATTTCACAAGCTTGT
GAGATATATAGGAATTTACAATAG

Upstream 100 bases:

>100_bases
AAATATTCAACCAAGTTTTCAAGAGTGTAAATTATATATTGAACACTATGAAAATGTTTATCGCACTTTAAAATATCAAG
GGTTTTAATAAGGAAAAAAG

Downstream 100 bases:

>100_bases
ATATTTTTAAGTAAAATAAATATGAAACATTCAATTAAAATTTTAGCAATACCATTTTTAGTATTAGCTTTTTCACAATC
AGTATCAGCTAATTTGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNLIKTLVTTVFLSSSVFSFHSIAWANTAEKQFQQGFSAYEKGDYKTALNLWLPLAQQGNMNAQYNLGLMYENGNGVKQS
DFEAVKWYRKAAEQGESSSQFNLGVKYYKGEGVKQDKIQAKKWFGKACDNGETKGCNNYRALNEENSYLTKMNKPSLNEL
ISLAQQGNMNAQYLLGQSYYRTKNYSSAAYWFQMAADRGHKRAQTILAGMYHLGKGVPQNILMARNLSQDACNHGISQAC
EIYRNLQ

Sequences:

>Translated_247_residues
MNLIKTLVTTVFLSSSVFSFHSIAWANTAEKQFQQGFSAYEKGDYKTALNLWLPLAQQGNMNAQYNLGLMYENGNGVKQS
DFEAVKWYRKAAEQGESSSQFNLGVKYYKGEGVKQDKIQAKKWFGKACDNGETKGCNNYRALNEENSYLTKMNKPSLNEL
ISLAQQGNMNAQYLLGQSYYRTKNYSSAAYWFQMAADRGHKRAQTILAGMYHLGKGVPQNILMARNLSQDACNHGISQAC
EIYRNLQ
>Mature_247_residues
MNLIKTLVTTVFLSSSVFSFHSIAWANTAEKQFQQGFSAYEKGDYKTALNLWLPLAQQGNMNAQYNLGLMYENGNGVKQS
DFEAVKWYRKAAEQGESSSQFNLGVKYYKGEGVKQDKIQAKKWFGKACDNGETKGCNNYRALNEENSYLTKMNKPSLNEL
ISLAQQGNMNAQYLLGQSYYRTKNYSSAAYWFQMAADRGHKRAQTILAGMYHLGKGVPQNILMARNLSQDACNHGISQAC
EIYRNLQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=160, Percent_Identity=28.75, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI151301150, Length=197, Percent_Identity=29.4416243654822, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87081769, Length=212, Percent_Identity=31.6037735849057, Blast_Score=81, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355295, Length=164, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27911; Mature: 27911

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKTLVTTVFLSSSVFSFHSIAWANTAEKQFQQGFSAYEKGDYKTALNLWLPLAQQGN
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
MNAQYNLGLMYENGNGVKQSDFEAVKWYRKAAEQGESSSQFNLGVKYYKGEGVKQDKIQA
CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCHHHHHH
KKWFGKACDNGETKGCNNYRALNEENSYLTKMNKPSLNELISLAQQGNMNAQYLLGQSYY
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEECCHHH
RTKNYSSAAYWFQMAADRGHKRAQTILAGMYHLGKGVPQNILMARNLSQDACNHGISQAC
HCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCHHHHH
EIYRNLQ
HHHHCCC
>Mature Secondary Structure
MNLIKTLVTTVFLSSSVFSFHSIAWANTAEKQFQQGFSAYEKGDYKTALNLWLPLAQQGN
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
MNAQYNLGLMYENGNGVKQSDFEAVKWYRKAAEQGESSSQFNLGVKYYKGEGVKQDKIQA
CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCHHHHHH
KKWFGKACDNGETKGCNNYRALNEENSYLTKMNKPSLNELISLAQQGNMNAQYLLGQSYY
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEECCHHH
RTKNYSSAAYWFQMAADRGHKRAQTILAGMYHLGKGVPQNILMARNLSQDACNHGISQAC
HCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCHHHHH
EIYRNLQ
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]