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The map label for this gene is ybeQ [C]

Identifier: 148827084

GI number: 148827084

Start: 358658

End: 359158

Strand: Reverse

Name: ybeQ [C]

Synonym: CGSHiGG_02005

Alternate gene names: 148827084

Gene position: 359158-358658 (Counterclockwise)

Preceding gene: 148827085

Following gene: 148827083

Centisome position: 19.03

GC content: 38.32

Gene sequence:

>501_bases
ATGAAACATTCAATTAAAATTTTAGCAATACCATTTTTAGTATTAGCTTTTTCACAATCAGTATCAGCTAATTTGCCTGC
AAATATTTCTCGTACACAGCTGACTCAAAAAGCAGAGCAAGGCAATGAAGAAGCGCAATTAATGCTGGCAGCTCGTTATG
GTAAAGGCTATGTCGATATACCAAAAGATTGTTCTCAATCTATTTATTGGTTTACTAGGGCTGCAGAACAAGGAAGTGCA
TTAGGACAATTTTCTTTAGCTATGGCATACGAGCAGGGAGATTGTGTGCAGCAAAGCCATAATCAAGCTGTTAAATGGTT
TAAGGCTGCGGCACAACAAAATATTCCTATTGCTCAGGCAATGCTTGCGCAGAAATATTATCGTGGTCAAGGCGTAAGAC
AGAATCGAGCTGAAGCAAAAGAATGGACTGGAAGAGCTTGTGATAATGGTATAGAAAGTGCTTGCCATAATTATCGGCTG
ATGAATGAAGGTAAGTATTAA

Upstream 100 bases:

>100_bases
TATGGCAAGAAATTTATCTCAAGATGCCTGTAATCACGGTATTTCACAAGCTTGTGAGATATATAGGAATTTACAATAGA
TATTTTTAAGTAAAATAAAT

Downstream 100 bases:

>100_bases
TAAAAATCAATGATTCTTACCAAGATTCGTTTTCTTTTTTAAAATCCCTTTTACCATCAGATGAAAGGGATTTTTTATTG
TTTGAAATCTAAAGAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Sel1 Domain-Containing Protein; Sel1 Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; TPR Repeat-Containing Protein; TPR Repeat Protein; TPR Repeat Protein SEL1 Subfamily; Peptidase; Sodium-Type Flagellar Motor Component; Serine/Threonine Protein Kinase; TPR Repeat-Containing SEL1 Subfamily Protein; Sel1 Repeat Family Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; TPR Repeat Protein Protein-Protein Interaction; Tpr Repeat Sel1 Subfamily; Periplasmic Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKHSIKILAIPFLVLAFSQSVSANLPANISRTQLTQKAEQGNEEAQLMLAARYGKGYVDIPKDCSQSIYWFTRAAEQGSA
LGQFSLAMAYEQGDCVQQSHNQAVKWFKAAAQQNIPIAQAMLAQKYYRGQGVRQNRAEAKEWTGRACDNGIESACHNYRL
MNEGKY

Sequences:

>Translated_166_residues
MKHSIKILAIPFLVLAFSQSVSANLPANISRTQLTQKAEQGNEEAQLMLAARYGKGYVDIPKDCSQSIYWFTRAAEQGSA
LGQFSLAMAYEQGDCVQQSHNQAVKWFKAAAQQNIPIAQAMLAQKYYRGQGVRQNRAEAKEWTGRACDNGIESACHNYRL
MNEGKY
>Mature_166_residues
MKHSIKILAIPFLVLAFSQSVSANLPANISRTQLTQKAEQGNEEAQLMLAARYGKGYVDIPKDCSQSIYWFTRAAEQGSA
LGQFSLAMAYEQGDCVQQSHNQAVKWFKAAAQQNIPIAQAMLAQKYYRGQGVRQNRAEAKEWTGRACDNGIESACHNYRL
MNEGKY

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923669, Length=125, Percent_Identity=32, Blast_Score=67, Evalue=7e-12,
Organism=Escherichia coli, GI1786867, Length=123, Percent_Identity=31.7073170731707, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=128, Percent_Identity=32.8125, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18527; Mature: 18527

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSIKILAIPFLVLAFSQSVSANLPANISRTQLTQKAEQGNEEAQLMLAARYGKGYVDI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
PKDCSQSIYWFTRAAEQGSALGQFSLAMAYEQGDCVQQSHNQAVKWFKAAAQQNIPIAQA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
MLAQKYYRGQGVRQNRAEAKEWTGRACDNGIESACHNYRLMNEGKY
HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKHSIKILAIPFLVLAFSQSVSANLPANISRTQLTQKAEQGNEEAQLMLAARYGKGYVDI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
PKDCSQSIYWFTRAAEQGSALGQFSLAMAYEQGDCVQQSHNQAVKWFKAAAQQNIPIAQA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
MLAQKYYRGQGVRQNRAEAKEWTGRACDNGIESACHNYRLMNEGKY
HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA